Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATCACGCCACGATAGCACTATCGCCTTGGACAAAGCGATGCTCCTTTATTGCATTATGGAGGAGTTACCAATCAATCTCGGCGAAATAGTCTGTCAACAGATCCATGCGTTCGTGAGGCATCCACGCGGCGCAAGGCCTTTTTCATACCTCATTGAACAACTCTGTTTGAAGATCGTGCCTACATTGAAGACTTTCCCTACAATCCCCATCAAGGATGGCTTGTGTTCCACAAGCCTTAAACACATCATCAATCTTCACAAGAACAAGGCTAAAGCAAGATGCCTCAAATCCACAAAGGTAGGGAAAAGCAAGAAAGAGGATGATGAAGTGGAGATTGATGATGACGAGGAATTGGAAAGTCCAACACCTGTCCCGCTTGTTCGCATAAGGAAAGGCGAGGGAGAGGCCTCTGGATCCACAAAGCAAAAGAAACACAAGGCCAAGGACCCTAGTGAACCCATTCCCCTTGCGATCGAGAGCCCTGCGAAGCCGAAAAAGATGAAGGCCACCAGACCGCCTTCACCCCCGCAACCCCTAGAAGAGCCAGCCTTTCTCCCAATAATCCAAATTCCTTCTCCCCAACAATCCAAAGGTCCAAGCCCTGCCCGCCAAATCCAAAATATTTCCACTCCCAACTCCCTGCGGCAAGAGGAAAATCCTCAATCTCTTGTCGCGGAAGCCCTTAACAAAACCACCTTCTCGCCGAATATTTTATCTAATGACCAGCTCAACGCGAAAATTGATGGATTCATGCAAGACCTCTGCGATACAGAATTTGAAGATTATAGAGAGTTAGAGGACGCGACGTTGGCACCTAGGTCGCAGCAAACCGTCTTTCTTGACGAGTCGATTGATGACCCAACTCCCAAGGAAAACCAAACAACCCTTGAGGAAGCTGGTGAGATACGGGCTCCTTCGCCACCTAAGCAAACAGAAATTCAACAAGACCATGCGACGAACGAGAATGAAGATGAAGATTTCTACAAGTACATCAATGAGGCAGTCGCCAAGCCAATGATGGATGGACTTGAAGATATTTTCCAAACCCAAGCCAATCTACAAGAACGCGCAGTGAAACATGAGAAGTAG
mRNA sequence
ATGCCATCACGCCACGATAGCACTATCGCCTTGGACAAAGCGATGCTCCTTTATTGCATTATGGAGGAGTTACCAATCAATCTCGGCGAAATAGTCTGTCAACAGATCCATGCGTTCGTGAGGCATCCACGCGGCGCAAGGCCTTTTTCATACCTCATTGAACAACTCTGTTTGAAGATCGTGCCTACATTGAAGACTTTCCCTACAATCCCCATCAAGGATGGCTTGTGTTCCACAAGCCTTAAACACATCATCAATCTTCACAAGAACAAGGCTAAAGCAAGATGCCTCAAATCCACAAAGGTAGGGAAAAGCAAGAAAGAGGATGATGAAGTGGAGATTGATGATGACGAGGAATTGGAAAGTCCAACACCTGTCCCGCTTGTTCGCATAAGGAAAGGCGAGGGAGAGGCCTCTGGATCCACAAAGCAAAAGAAACACAAGGCCAAGGACCCTAGTGAACCCATTCCCCTTGCGATCGAGAGCCCTGCGAAGCCGAAAAAGATGAAGGCCACCAGACCGCCTTCACCCCCGCAACCCCTAGAAGAGCCAGCCTTTCTCCCAATAATCCAAATTCCTTCTCCCCAACAATCCAAAGGTCCAAGCCCTGCCCGCCAAATCCAAAATATTTCCACTCCCAACTCCCTGCGGCAAGAGGAAAATCCTCAATCTCTTGTCGCGGAAGCCCTTAACAAAACCACCTTCTCGCCGAATATTTTATCTAATGACCAGCTCAACGCGAAAATTGATGGATTCATGCAAGACCTCTGCGATACAGAATTTGAAGATTATAGAGAGTTAGAGGACGCGACGTTGGCACCTAGGTCGCAGCAAACCGTCTTTCTTGACGAGTCGATTGATGACCCAACTCCCAAGGAAAACCAAACAACCCTTGAGGAAGCTGGTGAGATACGGGCTCCTTCGCCACCTAAGCAAACAGAAATTCAACAAGACCATGCGACGAACGAGAATGAAGATGAAGATTTCTACAAGTACATCAATGAGGCAGTCGCCAAGCCAATGATGGATGGACTTGAAGATATTTTCCAAACCCAAGCCAATCTACAAGAACGCGCAGTGAAACATGAGAAGTAG
Coding sequence (CDS)
ATGCCATCACGCCACGATAGCACTATCGCCTTGGACAAAGCGATGCTCCTTTATTGCATTATGGAGGAGTTACCAATCAATCTCGGCGAAATAGTCTGTCAACAGATCCATGCGTTCGTGAGGCATCCACGCGGCGCAAGGCCTTTTTCATACCTCATTGAACAACTCTGTTTGAAGATCGTGCCTACATTGAAGACTTTCCCTACAATCCCCATCAAGGATGGCTTGTGTTCCACAAGCCTTAAACACATCATCAATCTTCACAAGAACAAGGCTAAAGCAAGATGCCTCAAATCCACAAAGGTAGGGAAAAGCAAGAAAGAGGATGATGAAGTGGAGATTGATGATGACGAGGAATTGGAAAGTCCAACACCTGTCCCGCTTGTTCGCATAAGGAAAGGCGAGGGAGAGGCCTCTGGATCCACAAAGCAAAAGAAACACAAGGCCAAGGACCCTAGTGAACCCATTCCCCTTGCGATCGAGAGCCCTGCGAAGCCGAAAAAGATGAAGGCCACCAGACCGCCTTCACCCCCGCAACCCCTAGAAGAGCCAGCCTTTCTCCCAATAATCCAAATTCCTTCTCCCCAACAATCCAAAGGTCCAAGCCCTGCCCGCCAAATCCAAAATATTTCCACTCCCAACTCCCTGCGGCAAGAGGAAAATCCTCAATCTCTTGTCGCGGAAGCCCTTAACAAAACCACCTTCTCGCCGAATATTTTATCTAATGACCAGCTCAACGCGAAAATTGATGGATTCATGCAAGACCTCTGCGATACAGAATTTGAAGATTATAGAGAGTTAGAGGACGCGACGTTGGCACCTAGGTCGCAGCAAACCGTCTTTCTTGACGAGTCGATTGATGACCCAACTCCCAAGGAAAACCAAACAACCCTTGAGGAAGCTGGTGAGATACGGGCTCCTTCGCCACCTAAGCAAACAGAAATTCAACAAGACCATGCGACGAACGAGAATGAAGATGAAGATTTCTACAAGTACATCAATGAGGCAGTCGCCAAGCCAATGATGGATGGACTTGAAGATATTTTCCAAACCCAAGCCAATCTACAAGAACGCGCAGTGAAACATGAGAAGTAG
Protein sequence
MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFSYLIEQLCLKIVPTLKTFPTIPIKDGLCSTSLKHIINLHKNKAKARCLKSTKVGKSKKEDDEVEIDDDEELESPTPVPLVRIRKGEGEASGSTKQKKHKAKDPSEPIPLAIESPAKPKKMKATRPPSPPQPLEEPAFLPIIQIPSPQQSKGPSPARQIQNISTPNSLRQEENPQSLVAEALNKTTFSPNILSNDQLNAKIDGFMQDLCDTEFEDYRELEDATLAPRSQQTVFLDESIDDPTPKENQTTLEEAGEIRAPSPPKQTEIQQDHATNENEDEDFYKYINEAVAKPMMDGLEDIFQTQANLQERAVKHEK
Homology
BLAST of PI0025206 vs. ExPASy TrEMBL
Match:
A0A5D3C0C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76994G00060 PE=4 SV=1)
HSP 1 Score: 146.7 bits (369), Expect = 1.8e-31
Identity = 84/167 (50.30%), Postives = 118/167 (70.66%), Query Frame = 0
Query: 1 MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFSYLIEQLCLKI 60
MP+ D+ I++DK +LLYC +EE+ +N+G+I+C+ I A+VRHP ARP LIEQ+ LK
Sbjct: 1 MPTHQDNMISMDKTILLYCNIEEILVNVGKIICEHIQAWVRHPHDARPLPNLIEQIFLKA 60
Query: 61 VPTLKTFPTIPIKDGLCS-TSLKHIINLHKNKAKARCLKSTKVGKSKKEDDEVEIDDDEE 120
LK +KD +C+ TS+ H+INL+KNKA+ +CLK+ ++ K KEDD++EID++EE
Sbjct: 61 CFALKNLLKTMVKDEICTITSVSHMINLNKNKAEDKCLKTKEIEK-VKEDDKMEIDEEEE 120
Query: 121 LESPTPVPLVRIRKGEGEASGSTKQK-KHKAKDPSEPIPLA-IESPA 165
E T PL+R KGE +A GS K+K K KAKD + +PLA I SPA
Sbjct: 121 REDETLSPLIRKMKGENKAFGSRKRKRKPKAKDSRDLLPLANITSPA 166
BLAST of PI0025206 vs. ExPASy TrEMBL
Match:
A0A0A0LAN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 5.2e-26
Identity = 71/152 (46.71%), Postives = 101/152 (66.45%), Query Frame = 0
Query: 1 MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFSYLIEQLCLKI 60
MP+RH STI++++ ML+YCIM+++ +N+G+I+ I A V+HPRGARPFSYLIEQLCL+
Sbjct: 38 MPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRA 97
Query: 61 VPTLKTFPTIPIKDGLCSTSLKH-IINLHKNKAKARCLKSTKVGKSKKEDDEVEIDDDEE 120
L+ P + +KDG+ S H II +HKNKAK +CLK+ + K KE D+ DD EE
Sbjct: 98 CLMLEKLPQVEVKDGIWLPSTLHRIIAIHKNKAKIKCLKTKEGCKVVKEIDD---DDVEE 157
Query: 121 LESPTPVPLVRIRKGEGEASGSTKQKKHKAKD 152
+ +P R R+ + + GS K K K +D
Sbjct: 158 EDKKDNIPQKRKRQDKEDDLGSKKAKSSKIED 186
BLAST of PI0025206 vs. ExPASy TrEMBL
Match:
A0A5A7UWQ4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE=4 SV=1)
HSP 1 Score: 115.9 bits (289), Expect = 3.5e-22
Identity = 66/141 (46.81%), Postives = 95/141 (67.38%), Query Frame = 0
Query: 1 MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFSYLIEQLCLKI 60
MP+ HDSTI++++ ML+Y IMEE+ +N+GEI+ + I V+HPRG RPF LI++LCLK
Sbjct: 1 MPTSHDSTISMERIMLVYYIMEEIHVNVGEIISKHIIVGVKHPRGTRPFPQLIKKLCLKA 60
Query: 61 VPTLKTFPTIPIKDGL-CSTSLKHIINLHKNKAKARCLKSTKVGKSKKEDDEVEIDD-DE 120
L P I +KDG+ S +L II +++NKAK + LK+ + GKS+ + E+DD DE
Sbjct: 61 CSALDNLPQIGVKDGIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVK----EVDDKDE 120
Query: 121 ELESPTPVPLVRIRKGEGEAS 140
E + VPL R R+ E E+S
Sbjct: 121 EEKEEDNVPLKRKRQSEDESS 137
BLAST of PI0025206 vs. ExPASy TrEMBL
Match:
A0A5A7SRQ1 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 PE=4 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 2.2e-21
Identity = 70/184 (38.04%), Postives = 106/184 (57.61%), Query Frame = 0
Query: 1 MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFSYLIEQLCLKI 60
MP+RHD+TI++DK +L+YCIMEELP+N+GEI+C+ I A+V+HP+G+RPF +LIE+LCLK
Sbjct: 1 MPTRHDNTISMDKIVLIYCIMEELPVNVGEIICEHIFAWVKHPQGSRPFPHLIEKLCLKA 60
Query: 61 VPTLKTFPTIPIKDGLCSTS-LKHIINLHKNKAKARCLKSTKVGKSKKEDDEVEIDDDEE 120
P+L+ P + +KD + + S L I +HKNK++ + LK+ K + I EE
Sbjct: 61 CPSLEKLPQVEVKDRVYTASTLYCFIAIHKNKSRLKHLKT-------KHEARTSIPLQEE 120
Query: 121 LESPTPVPLVRIRKGEGEASGSTKQKKHKAKDPSEPIPLAIESPAKPKKMKATRPPSPPQ 180
+ P L K + K DP+ + A + + K+ PSPP+
Sbjct: 121 ILQPLASTLTNKTKPLSPEGSNRKVFHESFSDPTAFMDDAYKESEERAPKKSL--PSPPK 175
Query: 181 PLEE 184
E
Sbjct: 181 STTE 175
BLAST of PI0025206 vs. ExPASy TrEMBL
Match:
A0A5A7VJ48 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G004490 PE=4 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 2.2e-21
Identity = 53/104 (50.96%), Postives = 76/104 (73.08%), Query Frame = 0
Query: 1 MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFSYLIEQLCLKI 60
M +R +S +++D+ ML+YCIMEEL +NLGEI+C+ I V+HP GAR F +LIE+LCLK
Sbjct: 98 MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 157
Query: 61 VPTLKTFPTIPIKDGLCST-SLKHIINLHKNKAKARCLKSTKVG 104
L+ P + +KDG+C+T +L II +HKNKA+ + LK+ K G
Sbjct: 158 CLALEKLPQVEVKDGMCTTITLPRIIAIHKNKARLKRLKTKKEG 201
BLAST of PI0025206 vs. NCBI nr
Match:
KAA0058409.1 (hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa] >TYK04704.1 hypothetical protein E5676_scaffold76994G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 146.7 bits (369), Expect = 3.8e-31
Identity = 84/167 (50.30%), Postives = 118/167 (70.66%), Query Frame = 0
Query: 1 MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFSYLIEQLCLKI 60
MP+ D+ I++DK +LLYC +EE+ +N+G+I+C+ I A+VRHP ARP LIEQ+ LK
Sbjct: 1 MPTHQDNMISMDKTILLYCNIEEILVNVGKIICEHIQAWVRHPHDARPLPNLIEQIFLKA 60
Query: 61 VPTLKTFPTIPIKDGLCS-TSLKHIINLHKNKAKARCLKSTKVGKSKKEDDEVEIDDDEE 120
LK +KD +C+ TS+ H+INL+KNKA+ +CLK+ ++ K KEDD++EID++EE
Sbjct: 61 CFALKNLLKTMVKDEICTITSVSHMINLNKNKAEDKCLKTKEIEK-VKEDDKMEIDEEEE 120
Query: 121 LESPTPVPLVRIRKGEGEASGSTKQK-KHKAKDPSEPIPLA-IESPA 165
E T PL+R KGE +A GS K+K K KAKD + +PLA I SPA
Sbjct: 121 REDETLSPLIRKMKGENKAFGSRKRKRKPKAKDSRDLLPLANITSPA 166
BLAST of PI0025206 vs. NCBI nr
Match:
KGN57727.1 (hypothetical protein Csa_009739 [Cucumis sativus])
HSP 1 Score: 128.6 bits (322), Expect = 1.1e-25
Identity = 71/152 (46.71%), Postives = 101/152 (66.45%), Query Frame = 0
Query: 1 MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFSYLIEQLCLKI 60
MP+RH STI++++ ML+YCIM+++ +N+G+I+ I A V+HPRGARPFSYLIEQLCL+
Sbjct: 38 MPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRA 97
Query: 61 VPTLKTFPTIPIKDGLCSTSLKH-IINLHKNKAKARCLKSTKVGKSKKEDDEVEIDDDEE 120
L+ P + +KDG+ S H II +HKNKAK +CLK+ + K KE D+ DD EE
Sbjct: 98 CLMLEKLPQVEVKDGIWLPSTLHRIIAIHKNKAKIKCLKTKEGCKVVKEIDD---DDVEE 157
Query: 121 LESPTPVPLVRIRKGEGEASGSTKQKKHKAKD 152
+ +P R R+ + + GS K K K +D
Sbjct: 158 EDKKDNIPQKRKRQDKEDDLGSKKAKSSKIED 186
BLAST of PI0025206 vs. NCBI nr
Match:
KAA0060282.1 (drebrin-like [Cucumis melo var. makuwa])
HSP 1 Score: 115.9 bits (289), Expect = 7.1e-22
Identity = 66/141 (46.81%), Postives = 95/141 (67.38%), Query Frame = 0
Query: 1 MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFSYLIEQLCLKI 60
MP+ HDSTI++++ ML+Y IMEE+ +N+GEI+ + I V+HPRG RPF LI++LCLK
Sbjct: 1 MPTSHDSTISMERIMLVYYIMEEIHVNVGEIISKHIIVGVKHPRGTRPFPQLIKKLCLKA 60
Query: 61 VPTLKTFPTIPIKDGL-CSTSLKHIINLHKNKAKARCLKSTKVGKSKKEDDEVEIDD-DE 120
L P I +KDG+ S +L II +++NKAK + LK+ + GKS+ + E+DD DE
Sbjct: 61 CSALDNLPQIGVKDGIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVK----EVDDKDE 120
Query: 121 ELESPTPVPLVRIRKGEGEAS 140
E + VPL R R+ E E+S
Sbjct: 121 EEKEEDNVPLKRKRQSEDESS 137
BLAST of PI0025206 vs. NCBI nr
Match:
KAA0032726.1 (drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo var. makuwa])
HSP 1 Score: 113.2 bits (282), Expect = 4.6e-21
Identity = 70/184 (38.04%), Postives = 106/184 (57.61%), Query Frame = 0
Query: 1 MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFSYLIEQLCLKI 60
MP+RHD+TI++DK +L+YCIMEELP+N+GEI+C+ I A+V+HP+G+RPF +LIE+LCLK
Sbjct: 1 MPTRHDNTISMDKIVLIYCIMEELPVNVGEIICEHIFAWVKHPQGSRPFPHLIEKLCLKA 60
Query: 61 VPTLKTFPTIPIKDGLCSTS-LKHIINLHKNKAKARCLKSTKVGKSKKEDDEVEIDDDEE 120
P+L+ P + +KD + + S L I +HKNK++ + LK+ K + I EE
Sbjct: 61 CPSLEKLPQVEVKDRVYTASTLYCFIAIHKNKSRLKHLKT-------KHEARTSIPLQEE 120
Query: 121 LESPTPVPLVRIRKGEGEASGSTKQKKHKAKDPSEPIPLAIESPAKPKKMKATRPPSPPQ 180
+ P L K + K DP+ + A + + K+ PSPP+
Sbjct: 121 ILQPLASTLTNKTKPLSPEGSNRKVFHESFSDPTAFMDDAYKESEERAPKKSL--PSPPK 175
Query: 181 PLEE 184
E
Sbjct: 181 STTE 175
BLAST of PI0025206 vs. NCBI nr
Match:
KAA0066376.1 (hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa])
HSP 1 Score: 113.2 bits (282), Expect = 4.6e-21
Identity = 53/104 (50.96%), Postives = 76/104 (73.08%), Query Frame = 0
Query: 1 MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFSYLIEQLCLKI 60
M +R +S +++D+ ML+YCIMEEL +NLGEI+C+ I V+HP GAR F +LIE+LCLK
Sbjct: 98 MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 157
Query: 61 VPTLKTFPTIPIKDGLCST-SLKHIINLHKNKAKARCLKSTKVG 104
L+ P + +KDG+C+T +L II +HKNKA+ + LK+ K G
Sbjct: 158 CLALEKLPQVEVKDGMCTTITLPRIIAIHKNKARLKRLKTKKEG 201
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3C0C3 | 1.8e-31 | 50.30 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0LAN0 | 5.2e-26 | 46.71 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1 | [more] |
A0A5A7UWQ4 | 3.5e-22 | 46.81 | Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE... | [more] |
A0A5A7SRQ1 | 2.2e-21 | 38.04 | Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 P... | [more] |
A0A5A7VJ48 | 2.2e-21 | 50.96 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0058409.1 | 3.8e-31 | 50.30 | hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa] >TYK047... | [more] |
KGN57727.1 | 1.1e-25 | 46.71 | hypothetical protein Csa_009739 [Cucumis sativus] | [more] |
KAA0060282.1 | 7.1e-22 | 46.81 | drebrin-like [Cucumis melo var. makuwa] | [more] |
KAA0032726.1 | 4.6e-21 | 38.04 | drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo v... | [more] |
KAA0066376.1 | 4.6e-21 | 50.96 | hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |