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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. GAAAAATCAGCCTTCTCCTTTTACTTACCTTTCCCTTTTCGTCTCTTTTTGTGCTCATCTCATTTCTTAATTGAGGCCAAAAAAATAAACAATGGCTAGCATTTCTTCAGAGCTCTTTCAATCCAATCTCAAGAACAGTCATGGAGATGGCGGCCATGGTGGTAAGAACTACCTCGACCCGCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCTTCCTCAACCCCATATCGATATCGGCGGAGGCGGAAGTATAGTTGCAGATTACGACTTTGCTCCGGCAGCATGAATAAAGAGATCAAATACATGATTACAAGATAACATAATGTCTTTTGCTGATAAGTTTGAAGTGAGAGCGGTAATAAATATTTTTTATCTTCTGAGTTATGTTTAGATTGACTATATCAATATATTGTATTATATATATTTATAACTATTTTTGGAACCCTCAAGTTGAGAAAGGAGTGTGGAAATAATTGATGAGTAAAGAGTGTATGAGATTAAAGATTTTCCTTTTA mRNA sequence GAAAAATCAGCCTTCTCCTTTTACTTACCTTTCCCTTTTCGTCTCTTTTTGTGCTCATCTCATTTCTTAATTGAGGCCAAAAAAATAAACAATGGCTAGCATTTCTTCAGAGCTCTTTCAATCCAATCTCAAGAACAGTCATGGAGATGGCGGCCATGGTGGTAAGAACTACCTCGACCCGCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCTTCCTCAACCCCATATCGATATCGGCGGAGGCGGAAGTATAGTTGCAGATTACGACTTTGCTCCGGCAGCATGAATAAAGAGATCAAATACATGATTACAAGATAACATAATGTCTTTTGCTGATAAGTTTGAAGTGAGAGCGGTAATAAATATTTTTTATCTTCTGAGTTATGTTTAGATTGACTATATCAATATATTGTATTATATATATTTATAACTATTTTTGGAACCCTCAAGTTGAGAAAGGAGTGTGGAAATAATTGATGAGTAAAGAGTGTATGAGATTAAAGATTTTCCTTTTA Coding sequence (CDS) ATGGCTAGCATTTCTTCAGAGCTCTTTCAATCCAATCTCAAGAACAGTCATGGAGATGGCGGCCATGGTGGTAAGAACTACCTCGACCCGCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCTTCCTCAACCCCATATCGATATCGGCGGAGGCGGAAGTATAGTTGCAGATTACGACTTTGCTCCGGCAGCATGA Protein sequence MASISSELFQSNLKNSHGDGGHGGKNYLDPPPPPPPLPLPLPQPHIDIGGGGSIVADYDFAPAA
Homology
BLAST of PI0021744 vs. ExPASy TrEMBL
Match: A0A0A0LUD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G409740 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 5.0e-25 Identity = 61/64 (95.31%), Postives = 61/64 (95.31%), Query Frame = 0
Query: 1 MASISSELFQSNLKNSHGDGGHGGKNYLDPPPPPPPLPLPLPQPHIDIGGGGSIVADYDF 60
MASISSELFQSNLKNSHGD HGGKNYLD PPPPPPLPLPLPQPHIDIGGGGSIVADYDF
Sbjct: 1 MASISSELFQSNLKNSHGDRCHGGKNYLD-PPPPPPLPLPLPQPHIDIGGGGSIVADYDF 60
Query: 61 APAA 65
APAA
Sbjct: 61 APAA 63
BLAST of PI0021744 vs. NCBI nr
Match: KGN65403.1 (hypothetical protein Csa_019940 [Cucumis sativus]) HSP 1 Score: 122.9 bits (307), Expect = 1.0e-24 Identity = 61/64 (95.31%), Postives = 61/64 (95.31%), Query Frame = 0
Query: 1 MASISSELFQSNLKNSHGDGGHGGKNYLDPPPPPPPLPLPLPQPHIDIGGGGSIVADYDF 60
MASISSELFQSNLKNSHGD HGGKNYLD PPPPPPLPLPLPQPHIDIGGGGSIVADYDF
Sbjct: 1 MASISSELFQSNLKNSHGDRCHGGKNYLD-PPPPPPLPLPLPQPHIDIGGGGSIVADYDF 60
Query: 61 APAA 65
APAA
Sbjct: 61 APAA 63
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LUD7 | 5.0e-25 | 95.31 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G409740 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN65403.1 | 1.0e-24 | 95.31 | hypothetical protein Csa_019940 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..52 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..17 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 27..43 |
Relationships
The following mRNA feature(s) are a part of this gene:
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