PI0021744 (gene) Melon (PI 482460) v1

Overview
NamePI0021744
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 17886888 .. 17887402 (-)
RNA-Seq ExpressionPI0021744
SyntenyPI0021744
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAATCAGCCTTCTCCTTTTACTTACCTTTCCCTTTTCGTCTCTTTTTGTGCTCATCTCATTTCTTAATTGAGGCCAAAAAAATAAACAATGGCTAGCATTTCTTCAGAGCTCTTTCAATCCAATCTCAAGAACAGTCATGGAGATGGCGGCCATGGTGGTAAGAACTACCTCGACCCGCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCTTCCTCAACCCCATATCGATATCGGCGGAGGCGGAAGTATAGTTGCAGATTACGACTTTGCTCCGGCAGCATGAATAAAGAGATCAAATACATGATTACAAGATAACATAATGTCTTTTGCTGATAAGTTTGAAGTGAGAGCGGTAATAAATATTTTTTATCTTCTGAGTTATGTTTAGATTGACTATATCAATATATTGTATTATATATATTTATAACTATTTTTGGAACCCTCAAGTTGAGAAAGGAGTGTGGAAATAATTGATGAGTAAAGAGTGTATGAGATTAAAGATTTTCCTTTTA

mRNA sequence

GAAAAATCAGCCTTCTCCTTTTACTTACCTTTCCCTTTTCGTCTCTTTTTGTGCTCATCTCATTTCTTAATTGAGGCCAAAAAAATAAACAATGGCTAGCATTTCTTCAGAGCTCTTTCAATCCAATCTCAAGAACAGTCATGGAGATGGCGGCCATGGTGGTAAGAACTACCTCGACCCGCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCTTCCTCAACCCCATATCGATATCGGCGGAGGCGGAAGTATAGTTGCAGATTACGACTTTGCTCCGGCAGCATGAATAAAGAGATCAAATACATGATTACAAGATAACATAATGTCTTTTGCTGATAAGTTTGAAGTGAGAGCGGTAATAAATATTTTTTATCTTCTGAGTTATGTTTAGATTGACTATATCAATATATTGTATTATATATATTTATAACTATTTTTGGAACCCTCAAGTTGAGAAAGGAGTGTGGAAATAATTGATGAGTAAAGAGTGTATGAGATTAAAGATTTTCCTTTTA

Coding sequence (CDS)

ATGGCTAGCATTTCTTCAGAGCTCTTTCAATCCAATCTCAAGAACAGTCATGGAGATGGCGGCCATGGTGGTAAGAACTACCTCGACCCGCCTCCTCCTCCTCCTCCTCTTCCTCTTCCTCTTCCTCAACCCCATATCGATATCGGCGGAGGCGGAAGTATAGTTGCAGATTACGACTTTGCTCCGGCAGCATGA

Protein sequence

MASISSELFQSNLKNSHGDGGHGGKNYLDPPPPPPPLPLPLPQPHIDIGGGGSIVADYDFAPAA
Homology
[Close]
BLAST of PI0021744 vs. ExPASy TrEMBL
Match: A0A0A0LUD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G409740 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.0e-25
Identity = 61/64 (95.31%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 1  MASISSELFQSNLKNSHGDGGHGGKNYLDPPPPPPPLPLPLPQPHIDIGGGGSIVADYDF 60
          MASISSELFQSNLKNSHGD  HGGKNYLD PPPPPPLPLPLPQPHIDIGGGGSIVADYDF
Sbjct: 1  MASISSELFQSNLKNSHGDRCHGGKNYLD-PPPPPPLPLPLPQPHIDIGGGGSIVADYDF 60

Query: 61 APAA 65
          APAA
Sbjct: 61 APAA 63

[Close]
BLAST of PI0021744 vs. NCBI nr
Match: KGN65403.1 (hypothetical protein Csa_019940 [Cucumis sativus])

HSP 1 Score: 122.9 bits (307), Expect = 1.0e-24
Identity = 61/64 (95.31%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 1  MASISSELFQSNLKNSHGDGGHGGKNYLDPPPPPPPLPLPLPQPHIDIGGGGSIVADYDF 60
          MASISSELFQSNLKNSHGD  HGGKNYLD PPPPPPLPLPLPQPHIDIGGGGSIVADYDF
Sbjct: 1  MASISSELFQSNLKNSHGDRCHGGKNYLD-PPPPPPLPLPLPQPHIDIGGGGSIVADYDF 60

Query: 61 APAA 65
          APAA
Sbjct: 61 APAA 63

The following BLAST results are available for this feature:
BLAST of PI0021744 vs.
Match NameE-valueIdentityDescription
BLAST of PI0021744 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUD75.0e-2595.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G409740 PE=4 SV=1[more]
BLAST of PI0021744 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65403.11.0e-2495.31hypothetical protein Csa_019940 [Cucumis sativus][more]
BLAST of PI0021744 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..43

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021744.1PI0021744.1mRNA