PI0021193 (gene) Melon (PI 482460) v1

Overview
NamePI0021193
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 13229442 .. 13231009 (+)
RNA-Seq ExpressionPI0021193
SyntenyPI0021193
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTCATTCGCCGGTAACCATAATTTGCTAATTTCTTCAATTCAATTCAACCAGAAAACAAACTTAGAGCAGCACAATTTTGAAACAAGGATAGCGAAATCGAAAGCGAAGTATTTACAAGCATCTCGACCTCAAACCTTCTCCAAATTGAATGCTAATCCGATTCCAGTTCAACCCCATTCACTGTAAGCTTCAGTTCTTTTCAGATCTTGCCTTGATTCTGCTAATTAGCTCAACCAAATGTTTTCTGAGATCTCCGTTTTCAGTTTTTACAAACTCAATTGAAGCTTCATTTTGTGTTCGTAACTCTACTACGGCGTAATTATCGAGTTTATGGCTTCTTTTGTGGAGTTCTTTTTTTCTGTTAATTATTTGTGTTCATTGGGAGTTGGTTTCTTTATAGATCATGGAAATAGTGGATGATAGTCGAAATTAGTGCTTGATTTTTTGTTGATTTGTTGTCAAACCTGTAGATGGCAGGATCTATATCTATGTCTTCAATCTCTCGCATATATTTGATTCGGATGCTATACACAGTGCTTTCTTTTTTTGTTTTGGAAGTTGTTATGCTTATGAATTTGATGCATAATATCAACAAGGTTAAAAAAAGGCTACTGTACTTGAAATTTGCACCGGAATTAGCTTTGAAATTGGAATTCACTGACTACCTCCCAAAAGGATTTTGTTTGATTATATTTTAAATTTAGATGTTGACAGGTATGAATGTTATGATTGTAATAGTTATGTTTATTTAGATAGTATGTCCAATACAGTAGATTTTATTCTTTATTGAGAAAATTGATTGCAAAGTTTCAGTATATATACGTCATACGTGAACAAAATGAAATTGGATACTAAGACAAGAAGTCTTTGGAAGGGACAACAGATATACACAATTCTGAGGCAGGGACACATATATGGTGTATAATGTTGCCCTCCTTGATTGAAAAATTATGTGTTTCTAATTTGATATCTTACTGTTTCTCTCTCAATTTGTTTTCTTTAGAAAGAAATTAAAAATTAATAAAGAACGATGGTTCTTATTACTAGGGTCAAGAAGACTAATCAAACAGATTTAAGATTGGAGAATTCACAAGGAAAAACCTGAGAGAGAGAGCTTTTCCATTCTGAACGTTGATACATTTTGTAGTCAAATCTTCTTTGATGGTATTTAGGATGAACCTGAAATTGGATTTCATTTTGCTGATATTTTGAAGAGGTTTTATGCTTGAATTTGAGGCAGATAATCACAACAAAGGTTGAAGTCTTGTAGGTTTTGCAGAATGAGCTGGCATTTTAGGCTGAATGCCATAATGAAAGTTTTTACAAAATTAAAATGGAAACTAACTGGAAAGGAAAATCATTTGTTATGCTGGTTTTTTGACTCTACTTAATGTAGAAGCTCCAAACTGCTCTGTTTTCGTCCATGTCTTTCCTGAATGATGATGTTTCTAGTTTTTATTAAGGCAGAATTTTAATGCTGAGAAATATGATTTTATTATTGAATCTACACATCACTAAACTGAGTAACTTCATTTTGAATATTATTGTGGCGATGCAGGTAG

mRNA sequence

ATGAATTCATTCGCCGGTAACCATAATTTGCTAATTTCTTCAATTCAATTCAACCAGAAAACAAACTTAGAGCAGCACAATTTTGAAACAAGGATAGCGAAATCGAAAGCGAAGTATTTACAAGCATCTCGACCTCAAACCTTCTCCAAATTGAATGCTAATCCGATTCCAGTTCAACCCCATTCACTGTAG

Coding sequence (CDS)

ATGAATTCATTCGCCGGTAACCATAATTTGCTAATTTCTTCAATTCAATTCAACCAGAAAACAAACTTAGAGCAGCACAATTTTGAAACAAGGATAGCGAAATCGAAAGCGAAGTATTTACAAGCATCTCGACCTCAAACCTTCTCCAAATTGAATGCTAATCCGATTCCAGTTCAACCCCATTCACTGTAG

Protein sequence

MNSFAGNHNLLISSIQFNQKTNLEQHNFETRIAKSKAKYLQASRPQTFSKLNANPIPVQPHSL
Homology
[Close]
BLAST of PI0021193 vs. ExPASy TrEMBL
Match: A0A0A0K6W5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G098750 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0 

Query: 1  MNSFAGNHNLLISSIQFNQKTNLEQHNFETRIAKSKAKYLQASRPQTFSKLNANPIPVQP 60
          MNSFAGNHNLLISSIQFNQKTNLEQHNF+TRIAKSKAKYLQASRPQTFSK NANPI VQP
Sbjct: 1  MNSFAGNHNLLISSIQFNQKTNLEQHNFQTRIAKSKAKYLQASRPQTFSKSNANPILVQP 60

Query: 61 HSL 64
          HSL
Sbjct: 61 HSL 63

[Close]
BLAST of PI0021193 vs. NCBI nr
Match: KGN44007.1 (hypothetical protein Csa_018200 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0 

Query: 1  MNSFAGNHNLLISSIQFNQKTNLEQHNFETRIAKSKAKYLQASRPQTFSKLNANPIPVQP 60
          MNSFAGNHNLLISSIQFNQKTNLEQHNF+TRIAKSKAKYLQASRPQTFSK NANPI VQP
Sbjct: 1  MNSFAGNHNLLISSIQFNQKTNLEQHNFQTRIAKSKAKYLQASRPQTFSKSNANPILVQP 60

Query: 61 HSL 64
          HSL
Sbjct: 61 HSL 63

The following BLAST results are available for this feature:
BLAST of PI0021193 vs.
Match NameE-valueIdentityDescription
BLAST of PI0021193 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6W51.2e-2395.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G098750 PE=4 SV=1[more]
BLAST of PI0021193 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44007.12.5e-2395.24hypothetical protein Csa_018200 [Cucumis sativus][more]
BLAST of PI0021193 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0021193.1PI0021193.1mRNA