|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAATTCATTCGCCGGTAACCATAATTTGCTAATTTCTTCAATTCAATTCAACCAGAAAACAAACTTAGAGCAGCACAATTTTGAAACAAGGATAGCGAAATCGAAAGCGAAGTATTTACAAGCATCTCGACCTCAAACCTTCTCCAAATTGAATGCTAATCCGATTCCAGTTCAACCCCATTCACTGTAAGCTTCAGTTCTTTTCAGATCTTGCCTTGATTCTGCTAATTAGCTCAACCAAATGTTTTCTGAGATCTCCGTTTTCAGTTTTTACAAACTCAATTGAAGCTTCATTTTGTGTTCGTAACTCTACTACGGCGTAATTATCGAGTTTATGGCTTCTTTTGTGGAGTTCTTTTTTTCTGTTAATTATTTGTGTTCATTGGGAGTTGGTTTCTTTATAGATCATGGAAATAGTGGATGATAGTCGAAATTAGTGCTTGATTTTTTGTTGATTTGTTGTCAAACCTGTAGATGGCAGGATCTATATCTATGTCTTCAATCTCTCGCATATATTTGATTCGGATGCTATACACAGTGCTTTCTTTTTTTGTTTTGGAAGTTGTTATGCTTATGAATTTGATGCATAATATCAACAAGGTTAAAAAAAGGCTACTGTACTTGAAATTTGCACCGGAATTAGCTTTGAAATTGGAATTCACTGACTACCTCCCAAAAGGATTTTGTTTGATTATATTTTAAATTTAGATGTTGACAGGTATGAATGTTATGATTGTAATAGTTATGTTTATTTAGATAGTATGTCCAATACAGTAGATTTTATTCTTTATTGAGAAAATTGATTGCAAAGTTTCAGTATATATACGTCATACGTGAACAAAATGAAATTGGATACTAAGACAAGAAGTCTTTGGAAGGGACAACAGATATACACAATTCTGAGGCAGGGACACATATATGGTGTATAATGTTGCCCTCCTTGATTGAAAAATTATGTGTTTCTAATTTGATATCTTACTGTTTCTCTCTCAATTTGTTTTCTTTAGAAAGAAATTAAAAATTAATAAAGAACGATGGTTCTTATTACTAGGGTCAAGAAGACTAATCAAACAGATTTAAGATTGGAGAATTCACAAGGAAAAACCTGAGAGAGAGAGCTTTTCCATTCTGAACGTTGATACATTTTGTAGTCAAATCTTCTTTGATGGTATTTAGGATGAACCTGAAATTGGATTTCATTTTGCTGATATTTTGAAGAGGTTTTATGCTTGAATTTGAGGCAGATAATCACAACAAAGGTTGAAGTCTTGTAGGTTTTGCAGAATGAGCTGGCATTTTAGGCTGAATGCCATAATGAAAGTTTTTACAAAATTAAAATGGAAACTAACTGGAAAGGAAAATCATTTGTTATGCTGGTTTTTTGACTCTACTTAATGTAGAAGCTCCAAACTGCTCTGTTTTCGTCCATGTCTTTCCTGAATGATGATGTTTCTAGTTTTTATTAAGGCAGAATTTTAATGCTGAGAAATATGATTTTATTATTGAATCTACACATCACTAAACTGAGTAACTTCATTTTGAATATTATTGTGGCGATGCAGGTAG mRNA sequence ATGAATTCATTCGCCGGTAACCATAATTTGCTAATTTCTTCAATTCAATTCAACCAGAAAACAAACTTAGAGCAGCACAATTTTGAAACAAGGATAGCGAAATCGAAAGCGAAGTATTTACAAGCATCTCGACCTCAAACCTTCTCCAAATTGAATGCTAATCCGATTCCAGTTCAACCCCATTCACTGTAG Coding sequence (CDS) ATGAATTCATTCGCCGGTAACCATAATTTGCTAATTTCTTCAATTCAATTCAACCAGAAAACAAACTTAGAGCAGCACAATTTTGAAACAAGGATAGCGAAATCGAAAGCGAAGTATTTACAAGCATCTCGACCTCAAACCTTCTCCAAATTGAATGCTAATCCGATTCCAGTTCAACCCCATTCACTGTAG Protein sequence MNSFAGNHNLLISSIQFNQKTNLEQHNFETRIAKSKAKYLQASRPQTFSKLNANPIPVQPHSL
Homology
BLAST of PI0021193 vs. ExPASy TrEMBL
Match: A0A0A0K6W5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G098750 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0 Query: 1 MNSFAGNHNLLISSIQFNQKTNLEQHNFETRIAKSKAKYLQASRPQTFSKLNANPIPVQP 60 MNSFAGNHNLLISSIQFNQKTNLEQHNF+TRIAKSKAKYLQASRPQTFSK NANPI VQP Sbjct: 1 MNSFAGNHNLLISSIQFNQKTNLEQHNFQTRIAKSKAKYLQASRPQTFSKSNANPILVQP 60
Query: 61 HSL 64 HSL Sbjct: 61 HSL 63
BLAST of PI0021193 vs. NCBI nr
Match: KGN44007.1 (hypothetical protein Csa_018200 [Cucumis sativus]) HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0 Query: 1 MNSFAGNHNLLISSIQFNQKTNLEQHNFETRIAKSKAKYLQASRPQTFSKLNANPIPVQP 60 MNSFAGNHNLLISSIQFNQKTNLEQHNF+TRIAKSKAKYLQASRPQTFSK NANPI VQP Sbjct: 1 MNSFAGNHNLLISSIQFNQKTNLEQHNFQTRIAKSKAKYLQASRPQTFSKSNANPILVQP 60
Query: 61 HSL 64 HSL Sbjct: 61 HSL 63
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K6W5 | 1.2e-23 | 95.24 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G098750 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN44007.1 | 2.5e-23 | 95.24 | hypothetical protein Csa_018200 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
|