PI0020407 (gene) Melon (PI 482460) v1

Overview


Name	PI0020407
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr12: 16143820 .. 16145329 (+)
RNA-Seq Expression	PI0020407
Synteny	PI0020407

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATACACTCTTCAGACCATCGAAACTGAACCACATCCTCAAGCAAAGGAGAGAGCTCTCTAGAGCTAATAACTTGGGACCCCAAACTGTTACAAAAAAGGTTAGCCGCCACCTGCACCAGTGTTCGGACTTGGAATGTAGCGGTAAGTATAGTTGAAGAATAAAGTTTTCGTACCCAAGGGAGCGAACTGCGCTTTCTAATTCGTGATAGGTTTAAGATGAAATGATAGCTTCAAGACACGAAAATGATTAGTAATAGGGGGGTTTGTAATAGGCGAAAAGGAAAGAAGATGAAAGCAGTAAACTTGTCAAACCCACTTCTCTCGAGAAAAATCTCAATTCTGACACCACTAAGAATGCTGATGTTGACTCCTCTAGTGTTGTTATTCAAGAGACTACTGCCGAAGAAATCAAGTACATTGAAAGACTTGAGGACTGGGATAGAAAAAATCATCAAATCATCAAATCATCTTTTAGTTGGGTAACACTTTTATTCGACTATTCATACTCAATTTGATCATTTGATACTGCCAAAGAACTTTGGAATTTTCTGTCCACACGTTTTCAATCTATTTGCTCACTATTATCAATTACATTCTTGTCTTGTTAGTCTAAACCAAGAAGTCTAACAATCTGTGAATGAATATCTTGCCACTCTTCATCCTATTTGGACTCAGTTAGACCAGGCAAAAATCAGTCCTGTTCATATTCGCCTCATCAAAGTCCTCATGGGACTCCGTCCAGAGTATGAATCTATTCATGCTGCTCTGTTACATCGTAATCCTTTACCATCTCTCGATGCGATAGTTCAAGAAATCTTATTTGAGGAGAAAAGACTTGGCATTGTCTCCTCTCTACCCTCTGATATTGCTCTTGCAACTACTCATTCTCGACCGACTAATGAGTCCACTTTCTGGAAAAATTGTAAACTTAAGGTCATAAGTTTGCTAACTGTCCTACCATTGAGTGCAGGTATTGTCACAAGTGAGGCAACATCTTGGAAAACTGTCCAACTTGCCCACCTCGCCCTCCTGGTCACTCTCATAAACCTAAGTTTTCTCCTAAATCGGGTTCCTCATATGATATCACGACACTTCAAGCTTTCAGTTACATGATCTCCACGACTTACTAAAACAGGTGATCTCTTCCAACTCTACTGCCCTTTCTGCCATCTCAGGTACTTCTTGGCTCCTTGACTCAACTTGTTGTAATCATATGACTTCTGACATTTCATTGTTGTTCTCCCCTATTCCTGTTCAATCCCTTTCACCAATCCACTCTGCTGATGGTAATCACATGTCTATTTCTCACATTGGAACTATTAATACACCCACCATAAATCTTTCCAACACCTATCATGTTCTAAATCTCACATTCAACCTAGCCTCTGTTGGCCAATTATGTGATCTCGGCCTAACCATTGTCTTTTCTTCTCATGGATGTCAGGTTCAGGATTCTCAGACGGGACAGGTGATTGGTACGGGATGAAAGGTGGGACGATTATTTGA

mRNA sequence

ATGAATACACTCTTCAGACCATCGAAACTGAACCACATCCTCAAGCAAAGGAGAGAGCTCTCTAGAGCTAATAACTTGGGACCCCAAACTGTTACAAAAAAGGCGAAAAGGAAAGAAGATGAAAGCAGTAAACTTGTCAAACCCACTTCTCTCGAGAAAAATCTCAATTCTGACACCACTAAGAATGCTGATGTTGACTCCTCTAGTGTTGTTATTCAAGAGACTACTGCCGAAGAAATCAAGTACATTGAAAGACTTGAGGACTGGGATAGAAAAAATCATCAAATCATCAAATCATCTTTTAGTTGGTTAGACCAGGCAAAAATCAGTCCTGTTCATATTCGCCTCATCAAAGTCCTCATGGGACTCCGTCCAGAGTATGAATCTATTCATGCTGCTCTGTTACATCGTAATCCTTTACCATCTCTCGATGCGATAGTTCAAGAAATCTTATTTGAGGAGAAAAGACTTGGCATTGTCTCCTCTCTACCCTCTGATATTGCTCTTGCAACTACTCATTCTCGACCGACTAATGAGTCCACTTTCTGGAAAAATTGTAAACTTAAGGTCATAAGTTTGCTAACTGTCCTACCATTGAGTGCAGGTACTTCTTGGCTCCTTGACTCAACTTGTTGTAATCATATGACTTCTGACATTTCATTGTTGTTCTCCCCTATTCCTGTTCAATCCCTTTCACCAATCCACTCTGCTGATGGTTCAGGATTCTCAGACGGGACAGGTGATTGGTACGGGATGAAAGGTGGGACGATTATTTGA

Coding sequence (CDS)

ATGAATACACTCTTCAGACCATCGAAACTGAACCACATCCTCAAGCAAAGGAGAGAGCTCTCTAGAGCTAATAACTTGGGACCCCAAACTGTTACAAAAAAGGCGAAAAGGAAAGAAGATGAAAGCAGTAAACTTGTCAAACCCACTTCTCTCGAGAAAAATCTCAATTCTGACACCACTAAGAATGCTGATGTTGACTCCTCTAGTGTTGTTATTCAAGAGACTACTGCCGAAGAAATCAAGTACATTGAAAGACTTGAGGACTGGGATAGAAAAAATCATCAAATCATCAAATCATCTTTTAGTTGGTTAGACCAGGCAAAAATCAGTCCTGTTCATATTCGCCTCATCAAAGTCCTCATGGGACTCCGTCCAGAGTATGAATCTATTCATGCTGCTCTGTTACATCGTAATCCTTTACCATCTCTCGATGCGATAGTTCAAGAAATCTTATTTGAGGAGAAAAGACTTGGCATTGTCTCCTCTCTACCCTCTGATATTGCTCTTGCAACTACTCATTCTCGACCGACTAATGAGTCCACTTTCTGGAAAAATTGTAAACTTAAGGTCATAAGTTTGCTAACTGTCCTACCATTGAGTGCAGGTACTTCTTGGCTCCTTGACTCAACTTGTTGTAATCATATGACTTCTGACATTTCATTGTTGTTCTCCCCTATTCCTGTTCAATCCCTTTCACCAATCCACTCTGCTGATGGTTCAGGATTCTCAGACGGGACAGGTGATTGGTACGGGATGAAAGGTGGGACGATTATTTGA

Protein sequence

MNTLFRPSKLNHILKQRRELSRANNLGPQTVTKKAKRKEDESSKLVKPTSLEKNLNSDTTKNADVDSSSVVIQETTAEEIKYIERLEDWDRKNHQIIKSSFSWLDQAKISPVHIRLIKVLMGLRPEYESIHAALLHRNPLPSLDAIVQEILFEEKRLGIVSSLPSDIALATTHSRPTNESTFWKNCKLKVISLLTVLPLSAGTSWLLDSTCCNHMTSDISLLFSPIPVQSLSPIHSADGSGFSDGTGDWYGMKGGTII

Homology

[Close]

BLAST of PI0020407 vs. ExPASy TrEMBL
Match: A0A1S4E0Y9 (uncharacterized protein LOC107991463 OS=Cucumis melo OX=3656 GN=LOC107991463 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 6.6e-52
Identity = 149/340 (43.82%), Postives = 168/340 (49.41%), Query Frame = 0


Query: 43  SKLVKPTSLEKNLNSDTTKNADVDSSSVVIQETTAEEIKYIERLEDWDRKNHQII----- 102
           +K +KPT+  KN+  D T N    +S V+I ETTAE+IKYIERLEDWD KNHQII     
Sbjct: 44  TKPIKPTTPMKNI--DNTAN----TSDVLIHETTAEDIKYIERLEDWDSKNHQIITWLGN 103

Query: 103 ------------------------------------------------------------ 162
                                                                       
Sbjct: 104 TSIPAIHTQLDSFDTAKELWDFLATRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATL 163

Query: 163 KSSFSWLDQAKISPVHIRLIKVLMGLRPEYESIHAALLHRNPLPSLDAIVQEILFEEKRL 222
           +  ++ LDQ KI+P HIRLIKVLMGLRPEYES+ AALLHRNPLPSLDA VQEILFEEKRL
Sbjct: 164 QPIWTQLDQTKINPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRL 223

Query: 223 GIVSSLPSDIALATTHSRP-------TNESTFW------------------KNCKLKVIS 255
           GIVS+LPSD+ALATT+ R        TNE TFW                     KL + S
Sbjct: 224 GIVSALPSDVALATTYLRQPNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISS 283

[Close]

BLAST of PI0020407 vs. ExPASy TrEMBL
Match: A0A5D3CPU5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00700 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50
Identity = 140/295 (47.46%), Postives = 160/295 (54.24%), Query Frame = 0


Query: 39  EDESSKLVKPTSLEKNLNSDTTKNADVDSSSVVIQETTAEEIKYIERLEDWDRKNHQII- 98
           + + +K +KPT+  KN+  D T N    +S V+I ETTAE+IKYIERLEDWD KNHQII 
Sbjct: 15  DGDITKPIKPTTPMKNI--DNTAN----TSDVLIHETTAEDIKYIERLEDWDSKNHQIIT 74

Query: 99  ------------------------------------------------------------ 158
                                                                       
Sbjct: 75  WLGNTSIPAIHTQLDSFDTAKELWDFLATRFQSIGLAHYYQLYSTLINLNQEVGQSVNEY 134

Query: 159 ----KSSFSWLDQAKISPVHIRLIKVLMGLRPEYESIHAALLHRNPLPSLDAIVQEILFE 218
               +  ++ LDQ KI+P HIRLIKVLMGLRPEYES+ AALLHRNPLPSLDA VQEILFE
Sbjct: 135 LATLQPIWTQLDQTKINPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFE 194

Query: 219 EKRLGIVSSLPSDIALATTHSRP-------TNESTFW------------------KNCKL 244
           EKRLGIVS+LPSD+ALATT+ R        TNE TFW                     KL
Sbjct: 195 EKRLGIVSALPSDVALATTYLRQPNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKL 254

[Close]

BLAST of PI0020407 vs. ExPASy TrEMBL
Match: A0A5A7VDW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00430 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 131/282 (46.45%), Postives = 146/282 (51.77%), Query Frame = 0


Query: 71  VIQETTAEEIKYIERLEDWDRKNHQII--------------------------------- 130
           ++ ET+AE+I+YIERLEDWD KNHQII                                 
Sbjct: 50  IVHETSAEDIQYIERLEDWDSKNHQIITWLGLAHYYQLHSTLVSLNQEMGQSVNEYLATL 109

Query: 131 KSSFSWLDQAKISPVHIRLIKVLMGLRPEYESIHAALLHRNPLPSLDAIVQEILFEEKRL 190
           +  ++ LDQAKISP HIRLIKVLMGLRPEYES+ AALLHRNPLPSLDA VQEILFEEKRL
Sbjct: 110 QPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRL 169

Query: 191 GIVSSLPSDIALATTHSRPTNESTFWKNCKLK---------------------------- 244
           GIVSSL SD+ALATTH R  NE+ F KNCKL                             
Sbjct: 170 GIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDNCPTR 229

[Close]

BLAST of PI0020407 vs. ExPASy TrEMBL
Match: A0A5A7TXR0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00330 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 3.1e-49
Identity = 138/343 (40.23%), Postives = 162/343 (47.23%), Query Frame = 0


Query: 43  SKLVKPTSLEKNLNSDTTKNADVDSSSVVIQETTAEEIKYIERLEDWDRKNHQII----- 102
           +K VKPT   KN + + T++ D ++S +++ E T E+I+YIERLEDWD KNHQII     
Sbjct: 44  TKPVKPTFPMKNTSKNNTEHNDANTSDIIVHEPTVEDIQYIERLEDWDSKNHQIITWLGN 103

Query: 103 ------------------------------------------------------------ 162
                                                                       
Sbjct: 104 TSIPAIHTQFDTFDSAKELWNFLYTRFQSIGLAHYYQLHSTLVNLNQEVGQSVNEYLVTF 163

Query: 163 KSSFSWLDQAKISPVHIRLIKVLMGLRPEYESIHAALLHRNPLPSLDAIVQEILFEEKRL 222
           +  ++ LDQAKISP HIRLIKVLMGLR EYES+ AALLHRNPLPSLDA VQEILFEEKRL
Sbjct: 164 QPIWTQLDQAKISPDHIRLIKVLMGLRSEYESVRAALLHRNPLPSLDAAVQEILFEEKRL 223

Query: 223 GIVSSLPSDIALATTHSRPTNESTFWKNCKLK---------------------------- 244
           GIVSSLPSD+ALATTH R  NE++F KNCKL                             
Sbjct: 224 GIVSSLPSDVALATTHIRQANETSFCKNCKLHGHKFANCPTIECRYCYKRGHILDNCPTR 283

[Close]

BLAST of PI0020407 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 8.4e-47
Identity = 131/314 (41.72%), Postives = 146/314 (46.50%), Query Frame = 0


Query: 71  VIQETTAEEIKYIERLEDWDRKNHQII--------------------------------- 130
           ++ ET+AE+I+YIERLEDWD KNHQII                                 
Sbjct: 50  IVHETSAEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQ 109

Query: 131 --------------------------------KSSFSWLDQAKISPVHIRLIKVLMGLRP 190
                                           +  ++ LDQAKISP HIRLIKVLMGLRP
Sbjct: 110 SIGLAHYYQLHSTLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRP 169

Query: 191 EYESIHAALLHRNPLPSLDAIVQEILFEEKRLGIVSSLPSDIALATTHSRPTNESTFWKN 244
           EYES+ AALLHRNPLPSLDA VQEILFEEKRLGIVSSL SD+ALATTH R  NE+ F KN
Sbjct: 170 EYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKN 229

[Close]

BLAST of PI0020407 vs. NCBI nr
Match: XP_016901896.1 (PREDICTED: uncharacterized protein LOC107991463 [Cucumis melo])

HSP 1 Score: 214.2 bits (544), Expect = 1.4e-51
Identity = 149/340 (43.82%), Postives = 168/340 (49.41%), Query Frame = 0


Query: 43  SKLVKPTSLEKNLNSDTTKNADVDSSSVVIQETTAEEIKYIERLEDWDRKNHQII----- 102
           +K +KPT+  KN+  D T N    +S V+I ETTAE+IKYIERLEDWD KNHQII     
Sbjct: 44  TKPIKPTTPMKNI--DNTAN----TSDVLIHETTAEDIKYIERLEDWDSKNHQIITWLGN 103

Query: 103 ------------------------------------------------------------ 162
                                                                       
Sbjct: 104 TSIPAIHTQLDSFDTAKELWDFLATRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYLATL 163

Query: 163 KSSFSWLDQAKISPVHIRLIKVLMGLRPEYESIHAALLHRNPLPSLDAIVQEILFEEKRL 222
           +  ++ LDQ KI+P HIRLIKVLMGLRPEYES+ AALLHRNPLPSLDA VQEILFEEKRL
Sbjct: 164 QPIWTQLDQTKINPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRL 223

Query: 223 GIVSSLPSDIALATTHSRP-------TNESTFW------------------KNCKLKVIS 255
           GIVS+LPSD+ALATT+ R        TNE TFW                     KL + S
Sbjct: 224 GIVSALPSDVALATTYLRQPNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKLVISS 283

[Close]

BLAST of PI0020407 vs. NCBI nr
Match: KAA0037189.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK13883.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 209.9 bits (533), Expect = 2.6e-50
Identity = 140/295 (47.46%), Postives = 160/295 (54.24%), Query Frame = 0


Query: 39  EDESSKLVKPTSLEKNLNSDTTKNADVDSSSVVIQETTAEEIKYIERLEDWDRKNHQII- 98
           + + +K +KPT+  KN+  D T N    +S V+I ETTAE+IKYIERLEDWD KNHQII 
Sbjct: 15  DGDITKPIKPTTPMKNI--DNTAN----TSDVLIHETTAEDIKYIERLEDWDSKNHQIIT 74

Query: 99  ------------------------------------------------------------ 158
                                                                       
Sbjct: 75  WLGNTSIPAIHTQLDSFDTAKELWDFLATRFQSIGLAHYYQLYSTLINLNQEVGQSVNEY 134

Query: 159 ----KSSFSWLDQAKISPVHIRLIKVLMGLRPEYESIHAALLHRNPLPSLDAIVQEILFE 218
               +  ++ LDQ KI+P HIRLIKVLMGLRPEYES+ AALLHRNPLPSLDA VQEILFE
Sbjct: 135 LATLQPIWTQLDQTKINPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFE 194

Query: 219 EKRLGIVSSLPSDIALATTHSRP-------TNESTFW------------------KNCKL 244
           EKRLGIVS+LPSD+ALATT+ R        TNE TFW                     KL
Sbjct: 195 EKRLGIVSALPSDVALATTYLRQPNGTNIVTNEVTFWIIVQLVHLVPLVTHRNPSSPLKL 254

[Close]

BLAST of PI0020407 vs. NCBI nr
Match: KAA0065380.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 209.5 bits (532), Expect = 3.4e-50
Identity = 131/282 (46.45%), Postives = 146/282 (51.77%), Query Frame = 0


Query: 71  VIQETTAEEIKYIERLEDWDRKNHQII--------------------------------- 130
           ++ ET+AE+I+YIERLEDWD KNHQII                                 
Sbjct: 50  IVHETSAEDIQYIERLEDWDSKNHQIITWLGLAHYYQLHSTLVSLNQEMGQSVNEYLATL 109

Query: 131 KSSFSWLDQAKISPVHIRLIKVLMGLRPEYESIHAALLHRNPLPSLDAIVQEILFEEKRL 190
           +  ++ LDQAKISP HIRLIKVLMGLRPEYES+ AALLHRNPLPSLDA VQEILFEEKRL
Sbjct: 110 QPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFEEKRL 169

Query: 191 GIVSSLPSDIALATTHSRPTNESTFWKNCKLK---------------------------- 244
           GIVSSL SD+ALATTH R  NE+ F KNCKL                             
Sbjct: 170 GIVSSLHSDVALATTHLRQANETIFCKNCKLHGHKFANCPTIECRYCHKRGHILDNCPTR 229

[Close]

BLAST of PI0020407 vs. NCBI nr
Match: KAA0047794.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 205.3 bits (521), Expect = 6.3e-49
Identity = 138/343 (40.23%), Postives = 162/343 (47.23%), Query Frame = 0


Query: 43  SKLVKPTSLEKNLNSDTTKNADVDSSSVVIQETTAEEIKYIERLEDWDRKNHQII----- 102
           +K VKPT   KN + + T++ D ++S +++ E T E+I+YIERLEDWD KNHQII     
Sbjct: 44  TKPVKPTFPMKNTSKNNTEHNDANTSDIIVHEPTVEDIQYIERLEDWDSKNHQIITWLGN 103

Query: 103 ------------------------------------------------------------ 162
                                                                       
Sbjct: 104 TSIPAIHTQFDTFDSAKELWNFLYTRFQSIGLAHYYQLHSTLVNLNQEVGQSVNEYLVTF 163

Query: 163 KSSFSWLDQAKISPVHIRLIKVLMGLRPEYESIHAALLHRNPLPSLDAIVQEILFEEKRL 222
           +  ++ LDQAKISP HIRLIKVLMGLR EYES+ AALLHRNPLPSLDA VQEILFEEKRL
Sbjct: 164 QPIWTQLDQAKISPDHIRLIKVLMGLRSEYESVRAALLHRNPLPSLDAAVQEILFEEKRL 223

Query: 223 GIVSSLPSDIALATTHSRPTNESTFWKNCKLK---------------------------- 244
           GIVSSLPSD+ALATTH R  NE++F KNCKL                             
Sbjct: 224 GIVSSLPSDVALATTHIRQANETSFCKNCKLHGHKFANCPTIECRYCYKRGHILDNCPTR 283

[Close]

BLAST of PI0020407 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-46
Identity = 131/314 (41.72%), Postives = 146/314 (46.50%), Query Frame = 0


Query: 71  VIQETTAEEIKYIERLEDWDRKNHQII--------------------------------- 130
           ++ ET+AE+I+YIERLEDWD KNHQII                                 
Sbjct: 50  IVHETSAEDIQYIERLEDWDSKNHQIITWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQ 109

Query: 131 --------------------------------KSSFSWLDQAKISPVHIRLIKVLMGLRP 190
                                           +  ++ LDQAKISP HIRLIKVLMGLRP
Sbjct: 110 SIGLAHYYQLHSTLVSLNQEMGQSVNEYLATLQPIWTQLDQAKISPDHIRLIKVLMGLRP 169

Query: 191 EYESIHAALLHRNPLPSLDAIVQEILFEEKRLGIVSSLPSDIALATTHSRPTNESTFWKN 244
           EYES+ AALLHRNPLPSLDA VQEILFEEKRLGIVSSL SD+ALATTH R  NE+ F KN
Sbjct: 170 EYESVRAALLHRNPLPSLDAAVQEILFEEKRLGIVSSLHSDVALATTHLRQANETIFCKN 229

The following BLAST results are available for this feature:

BLAST of PI0020407 vs.


Match Name	E-value	Identity	Description

BLAST of PI0020407 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E0Y9	6.6e-52	43.82	uncharacterized protein LOC107991463 OS=Cucumis melo OX=3656 GN=LOC107991463 PE=...	[more]
A0A5D3CPU5	1.2e-50	47.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VDW0	1.6e-50	46.45	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7TXR0	3.1e-49	40.23	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3DG18	8.4e-47	41.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of PI0020407 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016901896.1	1.4e-51	43.82	PREDICTED: uncharacterized protein LOC107991463 [Cucumis melo]	[more]
KAA0037189.1	2.6e-50	47.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0065380.1	3.4e-50	46.45	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0047794.1	6.3e-49	40.23	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0043149.1	1.7e-46	41.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of PI0020407 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0020407.1	PI0020407.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0005488	binding