PI0018700 (gene) Melon (PI 482460) v1

Overview
NamePI0018700
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 29143931 .. 29144278 (-)
RNA-Seq ExpressionPI0018700
SyntenyPI0018700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGTCCTCGACAAAGTTCGCTCTCTTGTTCCTAATGTTTTTCGTTATCTCAGGTACATTAATCAATTTTAATTGTTTATAGCCTTTTTTTTTTTTCTTTTCGCAATAGTTATCGTTTGTATGACAATTTAACAATTACATTATTTCAGAAACATTCGTGTCAGATGCCAGAAATGTCGTAAACATTCCATGCAAAAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGTCACCCAAATGGATCAGAAAAGAAATTTCTTCACAAAGCCTTTCCTGAATATTTGAGAGAAGAAAAGACAACGCTCCTTGAAAACTAA

mRNA sequence

ATGGTGAAGTCCTCGACAAAGTTCGCTCTCTTGTTCCTAATGTTTTTCGTTATCTCAGAAACATTCGTGTCAGATGCCAGAAATGTCGTAAACATTCCATGCAAAAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGTCACCCAAATGGATCAGAAAAGAAATTTCTTCACAAAGCCTTTCCTGAATATTTGAGAGAAGAAAAGACAACGCTCCTTGAAAACTAA

Coding sequence (CDS)

ATGGTGAAGTCCTCGACAAAGTTCGCTCTCTTGTTCCTAATGTTTTTCGTTATCTCAGAAACATTCGTGTCAGATGCCAGAAATGTCGTAAACATTCCATGCAAAAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGTCACCCAAATGGATCAGAAAAGAAATTTCTTCACAAAGCCTTTCCTGAATATTTGAGAGAAGAAAAGACAACGCTCCTTGAAAACTAA

Protein sequence

MVKSSTKFALLFLMFFVISETFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHPNGSEKKFLHKAFPEYLREEKTTLLEN
Homology
BLAST of PI0018700 vs. ExPASy TrEMBL
Match: A0A0A0LJR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-34
Identity = 71/81 (87.65%), Postives = 75/81 (92.59%), Query Frame = 0

Query: 1  MVKSSTKFALLFLMFFVISETFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHPNGS 60
          MVKSSTK ALL LMFF+ISETFV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHP+G 
Sbjct: 1  MVKSSTKLALLLLMFFIISETFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 EKKFLHKAFPEYLREEKTTLL 82
          EKKFLH AFPE+LREEKTT L
Sbjct: 61 EKKFLHNAFPEHLREEKTTSL 81

BLAST of PI0018700 vs. ExPASy TrEMBL
Match: A0A0A0LMG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.9e-29
Identity = 65/78 (83.33%), Postives = 70/78 (89.74%), Query Frame = 0

Query: 1  MVKSSTKFALLFLMFFVISE-TFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHPNG 60
          MVK  TKFAL FLM F+ISE  FVSDARNVVNIPC+SRIDCSDPWDCDCKLNLCFCHP+G
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEKKFLHKAFPEYLREEK 78
           EKKFLHKAFPE LRE++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

BLAST of PI0018700 vs. ExPASy TrEMBL
Match: A0A2N9FRQ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.4e-05
Identity = 34/81 (41.98%), Postives = 45/81 (55.56%), Query Frame = 0

Query: 1  MVKSSTKFALLFLMFFVISE-TFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHPNG 60
          M KSS K AL+ ++  + S   F  DARNVV IPC++  DC D   CDC  N C C   G
Sbjct: 1  MEKSSLKLALIVVLLLIASSFQFRVDARNVVVIPCETYNDCRDSAKCDCVHNHCRC--PG 60

Query: 61 SEKKFLHKAFPEYLREEKTTL 81
           E+ F  KA   +L+ +  +L
Sbjct: 61 EEQDFFTKAITNHLKHDLFSL 79

BLAST of PI0018700 vs. NCBI nr
Match: KAE8651915.1 (hypothetical protein Csa_006059 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 1.0e-32
Identity = 69/81 (85.19%), Postives = 74/81 (91.36%), Query Frame = 0

Query: 1  MVKSSTKFALLFLMFFVISETFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHPNGS 60
          MVKSSTK ALL LMFF+ISE FV++ARNVVNIPC SRIDCSDPWDCDCKLNLCFCHP+G 
Sbjct: 1  MVKSSTKLALLLLMFFIISEMFVANARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHGL 60

Query: 61 EKKFLHKAFPEYLREEKTTLL 82
          EKKFLH AFPE+LREEKTT L
Sbjct: 61 EKKFLHNAFPEHLREEKTTSL 81

BLAST of PI0018700 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_006779 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 4.0e-29
Identity = 65/78 (83.33%), Postives = 70/78 (89.74%), Query Frame = 0

Query: 1  MVKSSTKFALLFLMFFVISE-TFVSDARNVVNIPCKSRIDCSDPWDCDCKLNLCFCHPNG 60
          MVK  TKFAL FLM F+ISE  FVSDARNVVNIPC+SRIDCSDPWDCDCKLNLCFCHP+G
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 SEKKFLHKAFPEYLREEK 78
           EKKFLHKAFPE LRE++
Sbjct: 61 LEKKFLHKAFPESLREDR 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LJR02.6e-3487.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1[more]
A0A0A0LMG31.9e-2983.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1[more]
A0A2N9FRQ07.4e-0541.98Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAE8651915.11.0e-3285.19hypothetical protein Csa_006059 [Cucumis sativus][more]
KGN61957.14.0e-2983.33hypothetical protein Csa_006779 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0018700.1PI0018700.1mRNA