Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTCCCAATAGGCAAAACTCAAACTCAAAAAGCCACAATGTTTCTCAAGTACTTTCTTCTCCTTCTTCTCGCAGTTGTGTTTCTTACCACAACTCAAGCCTTGAAACACCCCTCCAACTCCAACCAAGAAGTGATTCCGACCACCACCGACGTCACCGAAGGAAAGCTCCCGACCACCATCACCGATCTGAACGAAGAATCCAAATTCTACAAGAGGCCATTTCCCTACAAGAAGCCTTACACGAGGCCACCCTACAAGAAATATCCACCCTACAAGAAGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAGTACCCACCATCTTCCCACTAA
mRNA sequence
ATGAGGTTCCCAATAGGCAAAACTCAAACTCAAAAAGCCACAATGTTTCTCAAGTACTTTCTTCTCCTTCTTCTCGCAGTTGTGTTTCTTACCACAACTCAAGCCTTGAAACACCCCTCCAACTCCAACCAAGAAGTGATTCCGACCACCACCGACGTCACCGAAGGAAAGCTCCCGACCACCATCACCGATCTGAACGAAGAATCCAAATTCTACAAGAGGCCATTTCCCTACAAGAAGCCTTACACGAGGCCACCCTACAAGAAATATCCACCCTACAAGAAGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAGTACCCACCATCTTCCCACTAA
Coding sequence (CDS)
ATGAGGTTCCCAATAGGCAAAACTCAAACTCAAAAAGCCACAATGTTTCTCAAGTACTTTCTTCTCCTTCTTCTCGCAGTTGTGTTTCTTACCACAACTCAAGCCTTGAAACACCCCTCCAACTCCAACCAAGAAGTGATTCCGACCACCACCGACGTCACCGAAGGAAAGCTCCCGACCACCATCACCGATCTGAACGAAGAATCCAAATTCTACAAGAGGCCATTTCCCTACAAGAAGCCTTACACGAGGCCACCCTACAAGAAATATCCACCCTACAAGAAGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAGTACCCACCATCTTCCCACTAA
Protein sequence
MRFPIGKTQTQKATMFLKYFLLLLLAVVFLTTTQALKHPSNSNQEVIPTTTDVTEGKLPTTITDLNEESKFYKRPFPYKKPYTRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH
Homology
BLAST of PI0018385 vs. ExPASy TrEMBL
Match:
A0A0A0LI79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176190 PE=4 SV=1)
HSP 1 Score: 177.9 bits (450), Expect = 2.3e-41
Identity = 97/113 (85.84%), Postives = 100/113 (88.50%), Query Frame = 0
Query: 1 MRFPIGKTQTQKATMFLKYFLLLLLAVVFLTTTQALKHPSNSNQEVIPTTTDVTEGKLPT 60
MRFP+GKTQT KATMFLKYFLLLLLAVV LTTTQALKHPSNSNQEVIP TTDVT GKLPT
Sbjct: 1 MRFPVGKTQTPKATMFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIP-TTDVTHGKLPT 60
Query: 61 TITDLNEESKFYKRPFPYKKPYTRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH 114
TITD NEESKFY+RP PYKKPY R PPYK+YPPYKKRPPYKKYPPSSH
Sbjct: 61 TITDPNEESKFYRRPSPYKKPYKR------PPYKRYPPYKKRPPYKKYPPSSH 106
BLAST of PI0018385 vs. ExPASy TrEMBL
Match:
A0A0A0LNP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176690 PE=4 SV=1)
HSP 1 Score: 168.3 bits (425), Expect = 1.8e-38
Identity = 93/113 (82.30%), Postives = 98/113 (86.73%), Query Frame = 0
Query: 1 MRFPIGKTQTQKATMFLKYFLLLLLAVVFLTTTQALKHPSNSNQEVIPTTTDVTEGKLPT 60
MRFPIGKTQT+KATMF KYFLLLLLAVV LTTTQALKHP NSNQE IP +TD+T GKLPT
Sbjct: 1 MRFPIGKTQTRKATMFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIP-STDLTHGKLPT 60
Query: 61 TITDLNEESKFYKRPFPYKKPYTRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH 114
TITD NEESKF++RP PYKKPY R PPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 61 TITDPNEESKFFRRPSPYKKPYKR------PPYKKYPPYKKRPPYKKYPPSSH 106
BLAST of PI0018385 vs. ExPASy TrEMBL
Match:
A0A5A7VEY7 (Repetitive proline-rich cell wall protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00050 PE=4 SV=1)
HSP 1 Score: 145.6 bits (366), Expect = 1.3e-31
Identity = 81/99 (81.82%), Postives = 85/99 (85.86%), Query Frame = 0
Query: 15 MFLKYFLLLLLAVVFLTTTQALKHPSNSNQEVIPTTTDVTEGKLPTTITDLNEESKFYKR 74
MFLKYFLLLLLA V L+TTQALKHPS S+QEVIP TTDVT+G LPTTI D NEESKFY+R
Sbjct: 1 MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIP-TTDVTQGTLPTTIADPNEESKFYRR 60
Query: 75 PFPYKKPYTRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH 114
PFPYKKPY R PPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 61 PFPYKKPYKR------PPYKKYPPYKKRPPYKKYPPSSH 92
BLAST of PI0018385 vs. ExPASy TrEMBL
Match:
A0A1S3CE34 (repetitive proline-rich cell wall protein 3-like OS=Cucumis melo OX=3656 GN=LOC103499417 PE=4 SV=1)
HSP 1 Score: 145.6 bits (366), Expect = 1.3e-31
Identity = 81/99 (81.82%), Postives = 85/99 (85.86%), Query Frame = 0
Query: 15 MFLKYFLLLLLAVVFLTTTQALKHPSNSNQEVIPTTTDVTEGKLPTTITDLNEESKFYKR 74
MFLKYFLLLLLA V L+TTQALKHPS S+QEVIP TTDVT+G LPTTI D NEESKFY+R
Sbjct: 1 MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIP-TTDVTQGTLPTTIADPNEESKFYRR 60
Query: 75 PFPYKKPYTRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH 114
PFPYKKPY R PPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 61 PFPYKKPYKR------PPYKKYPPYKKRPPYKKYPPSSH 92
BLAST of PI0018385 vs. ExPASy TrEMBL
Match:
Q8H0R6 (Proline-rich protein OS=Cucumis sativus OX=3659 GN=prp1 PE=2 SV=1)
HSP 1 Score: 141.4 bits (355), Expect = 2.4e-30
Identity = 80/99 (80.81%), Postives = 84/99 (84.85%), Query Frame = 0
Query: 15 MFLKYFLLLLLAVVFLTTTQALKHPSNSNQEVIPTTTDVTEGKLPTTITDLNEESKFYKR 74
MF KYFLLLLLAVV LTTTQALKHP NSNQE IP +TD+T GKLPTTITD NEESKF++R
Sbjct: 1 MFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIP-STDLTHGKLPTTITDPNEESKFFRR 60
Query: 75 PFPYKKPYTRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH 114
P PYKKPY R PPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 61 PSPYKKPYKR------PPYKKYPPYKKRPPYKKYPPSSH 92
BLAST of PI0018385 vs. NCBI nr
Match:
XP_004147144.2 (repetitive proline-rich cell wall protein 3 [Cucumis sativus])
HSP 1 Score: 177.9 bits (450), Expect = 4.8e-41
Identity = 97/113 (85.84%), Postives = 100/113 (88.50%), Query Frame = 0
Query: 1 MRFPIGKTQTQKATMFLKYFLLLLLAVVFLTTTQALKHPSNSNQEVIPTTTDVTEGKLPT 60
MRFP+GKTQT KATMFLKYFLLLLLAVV LTTTQALKHPSNSNQEVIP TTDVT GKLPT
Sbjct: 1 MRFPVGKTQTPKATMFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIP-TTDVTHGKLPT 60
Query: 61 TITDLNEESKFYKRPFPYKKPYTRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH 114
TITD NEESKFY+RP PYKKPY R PPYK+YPPYKKRPPYKKYPPSSH
Sbjct: 61 TITDPNEESKFYRRPSPYKKPYKR------PPYKRYPPYKKRPPYKKYPPSSH 106
BLAST of PI0018385 vs. NCBI nr
Match:
KAE8651815.1 (hypothetical protein Csa_006392, partial [Cucumis sativus])
HSP 1 Score: 155.6 bits (392), Expect = 2.5e-34
Identity = 87/107 (81.31%), Postives = 92/107 (85.98%), Query Frame = 0
Query: 7 KTQTQKATMFLKYFLLLLLAVVFLTTTQALKHPSNSNQEVIPTTTDVTEGKLPTTITDLN 66
KTQT+KATMF KYFLLLLLAVV LTTTQALKHP NSNQE IP +TD+T GKLPTTITD N
Sbjct: 1 KTQTRKATMFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIP-STDLTHGKLPTTITDPN 60
Query: 67 EESKFYKRPFPYKKPYTRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH 114
EESKF++RP PYKKPY R PPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 61 EESKFFRRPSPYKKPYKR------PPYKKYPPYKKRPPYKKYPPSSH 100
BLAST of PI0018385 vs. NCBI nr
Match:
XP_008460638.1 (PREDICTED: repetitive proline-rich cell wall protein 3-like [Cucumis melo] >KAA0065667.1 repetitive proline-rich cell wall protein 3-like [Cucumis melo var. makuwa] >TYK15518.1 repetitive proline-rich cell wall protein 3-like [Cucumis melo var. makuwa])
HSP 1 Score: 145.6 bits (366), Expect = 2.6e-31
Identity = 81/99 (81.82%), Postives = 85/99 (85.86%), Query Frame = 0
Query: 15 MFLKYFLLLLLAVVFLTTTQALKHPSNSNQEVIPTTTDVTEGKLPTTITDLNEESKFYKR 74
MFLKYFLLLLLA V L+TTQALKHPS S+QEVIP TTDVT+G LPTTI D NEESKFY+R
Sbjct: 1 MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIP-TTDVTQGTLPTTIADPNEESKFYRR 60
Query: 75 PFPYKKPYTRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH 114
PFPYKKPY R PPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 61 PFPYKKPYKR------PPYKKYPPYKKRPPYKKYPPSSH 92
BLAST of PI0018385 vs. NCBI nr
Match:
NP_001267631.1 (uncharacterized protein LOC101210961 precursor [Cucumis sativus] >CAD44256.1 proline-rich protein [Cucumis sativus])
HSP 1 Score: 141.4 bits (355), Expect = 4.9e-30
Identity = 80/99 (80.81%), Postives = 84/99 (84.85%), Query Frame = 0
Query: 15 MFLKYFLLLLLAVVFLTTTQALKHPSNSNQEVIPTTTDVTEGKLPTTITDLNEESKFYKR 74
MF KYFLLLLLAVV LTTTQALKHP NSNQE IP +TD+T GKLPTTITD NEESKF++R
Sbjct: 1 MFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIP-STDLTHGKLPTTITDPNEESKFFRR 60
Query: 75 PFPYKKPYTRPPYKKYPPYKKYPPYKKRPPYKKYPPSSH 114
P PYKKPY R PPYKKYPPYKKRPPYKKYPPSSH
Sbjct: 61 PSPYKKPYKR------PPYKKYPPYKKRPPYKKYPPSSH 92
BLAST of PI0018385 vs. NCBI nr
Match:
WP_219729224.1 (hypothetical protein, partial [Pectobacterium odoriferum])
HSP 1 Score: 125.9 bits (315), Expect = 2.1e-25
Identity = 77/107 (71.96%), Postives = 83/107 (77.57%), Query Frame = 0
Query: 9 QTQKATMFLKYFLLLLLAVVFLTTTQALKHPSNSNQEVIPTTTDVTEGKLPTTI---TDL 68
QTQK MFLKYFLLLLLAVV LTTTQALKHPS+SNQEVIP +T+ +LPTT TD
Sbjct: 1 QTQKTKMFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIP----LTDERLPTTTTTNTDP 60
Query: 69 NEESKFYKRPFPYKKPYTRPPYKKYPPYKKYPPYKKRPPYKKYPPSS 113
+EESKF YKKPY + PY K PPYKKYPPYKK PPYKKYPPSS
Sbjct: 61 DEESKF------YKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSS 97
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LI79 | 2.3e-41 | 85.84 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176190 PE=4 SV=1 | [more] |
A0A0A0LNP2 | 1.8e-38 | 82.30 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176690 PE=4 SV=1 | [more] |
A0A5A7VEY7 | 1.3e-31 | 81.82 | Repetitive proline-rich cell wall protein 3-like OS=Cucumis melo var. makuwa OX=... | [more] |
A0A1S3CE34 | 1.3e-31 | 81.82 | repetitive proline-rich cell wall protein 3-like OS=Cucumis melo OX=3656 GN=LOC1... | [more] |
Q8H0R6 | 2.4e-30 | 80.81 | Proline-rich protein OS=Cucumis sativus OX=3659 GN=prp1 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_004147144.2 | 4.8e-41 | 85.84 | repetitive proline-rich cell wall protein 3 [Cucumis sativus] | [more] |
KAE8651815.1 | 2.5e-34 | 81.31 | hypothetical protein Csa_006392, partial [Cucumis sativus] | [more] |
XP_008460638.1 | 2.6e-31 | 81.82 | PREDICTED: repetitive proline-rich cell wall protein 3-like [Cucumis melo] >KAA0... | [more] |
NP_001267631.1 | 4.9e-30 | 80.81 | uncharacterized protein LOC101210961 precursor [Cucumis sativus] >CAD44256.1 pro... | [more] |
WP_219729224.1 | 2.1e-25 | 71.96 | hypothetical protein, partial [Pectobacterium odoriferum] | [more] |
Match Name | E-value | Identity | Description | |