Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTTGTTTTCTGAATCTGTATTTATATGTTCTTTTGGTTGTTTATCAGGTTTGGATCTCTTCTACATGTATTGGTTTAGTTTCCCCTAGTGGTAAAAAAAAAAAAACTCCCTTCACTCTGGCAGCTGCAACTAGCTCCAAGTCTTCTCGCACCTTCAAATGGGTGTGGGATAATGGAGTGATATCTATTGGTGTTTTGAGGAAATCAAGATCATCACACATTTGGAGATTGTGTCGTGTTTTAGAGGGGCTGTCGCTCGATTACGGTTAA
mRNA sequence
ATGGCGGTTTGTTTTCTGAATCTTGGTAAAAAAAAAAAAACTCCCTTCACTCTGGCAGCTGCAACTAGCTCCAAGTCTTCTCGCACCTTCAAATGGGTGTGGGATAATGGAGTGATATCTATTGGTGTTTTGAGGAAATCAAGATCATCACACATTTGGAGATTGTGTCGTGTTTTAGAGGGGCTGTCGCTCGATTACGGTTAA
Coding sequence (CDS)
ATGGCGGTTTGTTTTCTGAATCTTGGTAAAAAAAAAAAAACTCCCTTCACTCTGGCAGCTGCAACTAGCTCCAAGTCTTCTCGCACCTTCAAATGGGTGTGGGATAATGGAGTGATATCTATTGGTGTTTTGAGGAAATCAAGATCATCACACATTTGGAGATTGTGTCGTGTTTTAGAGGGGCTGTCGCTCGATTACGGTTAA
Protein sequence
MAVCFLNLGKKKKTPFTLAAATSSKSSRTFKWVWDNGVISIGVLRKSRSSHIWRLCRVLEGLSLDYG
Homology
BLAST of PI0017788 vs. ExPASy TrEMBL
Match:
A0A0A0K3N3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045530 PE=4 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 63/80 (78.75%), Postives = 64/80 (80.00%), Query Frame = 0
Query: 1 MAVCFLNLGKK-------------KKTPFTLAAATSSKSSRTFKWVWDNGVISIGVLRKS 60
MAVCFLNL KKTPFTLAAATSSKSSRTFKWVWDNGVIS+GVLRKS
Sbjct: 1 MAVCFLNLLGSLLHVCIGLVSLVVKKTPFTLAAATSSKSSRTFKWVWDNGVISLGVLRKS 60
Query: 61 RSSHIWRLCRVLEGLSLDYG 68
RSSHIWRLCRVLEGLSLDYG
Sbjct: 61 RSSHIWRLCRVLEGLSLDYG 80
BLAST of PI0017788 vs. ExPASy TrEMBL
Match:
A0A6A5NCW2 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00029075 PE=4 SV=1)
HSP 1 Score: 67.4 bits (163), Expect = 2.6e-08
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 0
Query: 6 LNLGKKKKTPFTLAAATSSKSSRTFKWVW-DN--GVISIGVLRKSRSSHIWRLCRVLEGL 65
L+ +++ FTLAA T+S SRT + VW DN GVI + VL++SRSS IWRLCRV GL
Sbjct: 67 LDSASQRRISFTLAALTNSNYSRTSRRVWGDNEAGVILLCVLQRSRSSDIWRLCRVSVGL 126
Query: 66 SLDYG 68
SLDYG
Sbjct: 127 SLDYG 131
BLAST of PI0017788 vs. ExPASy TrEMBL
Match:
A0A445HNT0 (Protein phosphatase 1 regulatory subunit pprA isoform F (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_033920 PE=4 SV=1)
HSP 1 Score: 66.2 bits (160), Expect = 5.8e-08
Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 0
Query: 12 KKTPFTLAAATSSKSSRTFKWVW--DNGVISIGVLRKSRSSHIWRLCRVLEGLSLDYG 68
K FTLAA T S SRT + VW + GVI + VLR+S+SS IWRLCRV GLSLDYG
Sbjct: 43 KGISFTLAAITKSNYSRTSRRVWGDEEGVIWLCVLRRSKSSDIWRLCRVSVGLSLDYG 100
BLAST of PI0017788 vs. ExPASy TrEMBL
Match:
A0A4D6LH87 (Internalin A OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2410 PE=4 SV=1)
HSP 1 Score: 54.7 bits (130), Expect = 1.7e-04
Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 0
Query: 12 KKTPFTLAAATSSKSSRTFKWVW--DNGVISIGVLRKSRSSHIWRLCRVLEGLSLD 66
K FTLAA T SRT + VW + GVI + VLR+S+SS IWRLCRV + L LD
Sbjct: 26 KGISFTLAAITKPNYSRTSRRVWGDEEGVIWLCVLRRSKSSDIWRLCRVSKVLCLD 81
BLAST of PI0017788 vs. NCBI nr
Match:
KAE8645756.1 (hypothetical protein Csa_020289 [Cucumis sativus])
HSP 1 Score: 117.5 bits (293), Expect = 4.5e-23
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0
Query: 12 KKTPFTLAAATSSKSSRTFKWVWDNGVISIGVLRKSRSSHIWRLCRVLEGLSLDYG 68
KKTPFTLAAATSSKSSRTFKWVWDNGVIS+GVLRKSRSSHIWRLCRVLEGLSLDYG
Sbjct: 51 KKTPFTLAAATSSKSSRTFKWVWDNGVISLGVLRKSRSSHIWRLCRVLEGLSLDYG 106
BLAST of PI0017788 vs. NCBI nr
Match:
KAG7011939.1 (hypothetical protein SDJN02_26847, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 107.1 bits (266), Expect = 6.1e-20
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0
Query: 12 KKTPFTLAAATSSKSSRTFKWVWDNGVISIGVLRKSRSSHIWRLCRVLEGLSLDYG 68
KK FTLAAATSS SSRTFKWVWDNGVIS+GVLRKSRSS+IWRLCRVLEGLSLDYG
Sbjct: 22 KKILFTLAAATSSNSSRTFKWVWDNGVISLGVLRKSRSSYIWRLCRVLEGLSLDYG 77
BLAST of PI0017788 vs. NCBI nr
Match:
KAG5224920.1 (Protein phosphatase regulatory [Salix suchowensis])
HSP 1 Score: 70.9 bits (172), Expect = 4.9e-09
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 0
Query: 6 LNLGKKKKTPFTLAAATSSKSSRTFKWVW--DNGVISIGVLRKSRSSHIWRLCRVLEGLS 65
L +++ FTLAAAT+ K S + VW + GVI + LR+SRSSH+WRLCRV EGLS
Sbjct: 58 LGFSSRQRFLFTLAAATNLKHSHASRRVWGDNEGVIFLCALRRSRSSHVWRLCRVSEGLS 117
Query: 66 LDYG 68
LDYG
Sbjct: 118 LDYG 121
BLAST of PI0017788 vs. NCBI nr
Match:
KAF1885186.1 (hypothetical protein Lal_00029075 [Lupinus albus])
HSP 1 Score: 67.4 bits (163), Expect = 5.4e-08
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 0
Query: 6 LNLGKKKKTPFTLAAATSSKSSRTFKWVW-DN--GVISIGVLRKSRSSHIWRLCRVLEGL 65
L+ +++ FTLAA T+S SRT + VW DN GVI + VL++SRSS IWRLCRV GL
Sbjct: 67 LDSASQRRISFTLAALTNSNYSRTSRRVWGDNEAGVILLCVLQRSRSSDIWRLCRVSVGL 126
Query: 66 SLDYG 68
SLDYG
Sbjct: 127 SLDYG 131
BLAST of PI0017788 vs. NCBI nr
Match:
RZB75244.1 (Protein phosphatase 1 regulatory subunit pprA isoform F, partial [Glycine soja])
HSP 1 Score: 66.2 bits (160), Expect = 1.2e-07
Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 0
Query: 12 KKTPFTLAAATSSKSSRTFKWVW--DNGVISIGVLRKSRSSHIWRLCRVLEGLSLDYG 68
K FTLAA T S SRT + VW + GVI + VLR+S+SS IWRLCRV GLSLDYG
Sbjct: 43 KGISFTLAAITKSNYSRTSRRVWGDEEGVIWLCVLRRSKSSDIWRLCRVSVGLSLDYG 100
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K3N3 | 1.2e-24 | 78.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045530 PE=4 SV=1 | [more] |
| A0A6A5NCW2 | 2.6e-08 | 58.46 | Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00029075 PE=4 SV=1 | [more] |
| A0A445HNT0 | 5.8e-08 | 62.07 | Protein phosphatase 1 regulatory subunit pprA isoform F (Fragment) OS=Glycine so... | [more] |
| A0A4D6LH87 | 1.7e-04 | 55.36 | Internalin A OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g2410 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8645756.1 | 4.5e-23 | 98.21 | hypothetical protein Csa_020289 [Cucumis sativus] | [more] |
| KAG7011939.1 | 6.1e-20 | 91.07 | hypothetical protein SDJN02_26847, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG5224920.1 | 4.9e-09 | 56.25 | Protein phosphatase regulatory [Salix suchowensis] | [more] |
| KAF1885186.1 | 5.4e-08 | 58.46 | hypothetical protein Lal_00029075 [Lupinus albus] | [more] |
| RZB75244.1 | 1.2e-07 | 62.07 | Protein phosphatase 1 regulatory subunit pprA isoform F, partial [Glycine soja] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
