PI0017787 (gene) Melon (PI 482460) v1

Overview


Name	PI0017787
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr04: 265511 .. 265966 (-)
RNA-Seq Expression	PI0017787
Synteny	PI0017787

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCTCTCTCTTCTCTTCCACTTCACTAAACTCACATCACTCAAATGTGGCTTCTCTGGTCCCCCAAGAACAACTCCCCCAAAACTTCCACATCTTCCACCACCGCCGCCGTTACTCCCACTTCACTCGCTCCCAACCCATCCTCCTCCCACTCCAACTGCCTCGCCAAATTGTTGCGCAAACTCAAGAAACGAAGCAGAGTACTGTGTAGCACCTCCGGAGACAGCACCACCCCCTTCCAATGCCGCTACGATCCTCTCAGCTACTCTCTTAATTTCGACACCACCGGCTGCGGAAGCTTGTTAGATGATCATTACTATCACTACTTCTGCGCTTTCTCTTCCAGATTCGCCTCCAATCCAGGGAATCTTTCTACTCATTCTCTTCCTCCTGTAACACTCCCTACTTCTCGCTAGCGCCATCTCTATATCCCTACCATTTTTCTTTCCCCCTTT

mRNA sequence

CTCCCTCTCTCTTCTCTTCCACTTCACTAAACTCACATCACTCAAATGTGGCTTCTCTGGTCCCCCAAGAACAACTCCCCCAAAACTTCCACATCTTCCACCACCGCCGCCGTTACTCCCACTTCACTCGCTCCCAACCCATCCTCCTCCCACTCCAACTGCCTCGCCAAATTGTTGCGCAAACTCAAGAAACGAAGCAGAGTACTGTGTAGCACCTCCGGAGACAGCACCACCCCCTTCCAATGCCGCTACGATCCTCTCAGCTACTCTCTTAATTTCGACACCACCGGCTGCGGAAGCTTGTTAGATGATCATTACTATCACTACTTCTGCGCTTTCTCTTCCAGATTCGCCTCCAATCCAGGGAATCTTTCTACTCATTCTCTTCCTCCTGTAACACTCCCTACTTCTCGCTAGCGCCATCTCTATATCCCTACCATTTTTCTTTCCCCCTTT

Coding sequence (CDS)

ATGTGGCTTCTCTGGTCCCCCAAGAACAACTCCCCCAAAACTTCCACATCTTCCACCACCGCCGCCGTTACTCCCACTTCACTCGCTCCCAACCCATCCTCCTCCCACTCCAACTGCCTCGCCAAATTGTTGCGCAAACTCAAGAAACGAAGCAGAGTACTGTGTAGCACCTCCGGAGACAGCACCACCCCCTTCCAATGCCGCTACGATCCTCTCAGCTACTCTCTTAATTTCGACACCACCGGCTGCGGAAGCTTGTTAGATGATCATTACTATCACTACTTCTGCGCTTTCTCTTCCAGATTCGCCTCCAATCCAGGGAATCTTTCTACTCATTCTCTTCCTCCTGTAACACTCCCTACTTCTCGCTAG

Protein sequence

MWLLWSPKNNSPKTSTSSTTAAVTPTSLAPNPSSSHSNCLAKLLRKLKKRSRVLCSTSGDSTTPFQCRYDPLSYSLNFDTTGCGSLLDDHYYHYFCAFSSRFASNPGNLSTHSLPPVTLPTSR

Homology

[Close]

BLAST of PI0017787 vs. ExPASy TrEMBL
Match: A0A5A7UFE1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00320 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.0e-55
Identity = 108/120 (90.00%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 4   LWSPKNNSPKTSTSSTTAAVTPTSLAPNPSSSHSNCLAKLLRKLKKRSRVLCSTSGDSTT 63
           +W PKNN+PKT+TSSTTAAVTPTSLAP PSSSH NCLAKLLRKLKKRSRVLC+T+GDS++
Sbjct: 1   MWLPKNNAPKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDSSS 60

Query: 64  PFQCRYDPLSYSLNFDTTGCGSLLDDHYYHYFCAFSSRFASNPGNLSTHSLPPVTLPTSR 123
           PFQCRYDPLSYSLNFDT+GCGSLLDDHYY YFCAFSSRFASNPGNLSTHSLPPVTLPTSR
Sbjct: 61  PFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPTSR 120

[Close]

BLAST of PI0017787 vs. ExPASy TrEMBL
Match: A0A0A0KMC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526510 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.0e-50
Identity = 105/124 (84.68%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 4   LWSPKNNSPKTSTSSTT----AAVTPTSLAPNPSSSHSNCLAKLLRKLKKRSRVLCSTSG 63
           +W P NN+PKT+TSSTT    AAVTPTSLAP PSSS+ N LAKLLRKLKKRSRVLCST+G
Sbjct: 1   MWLPNNNAPKTTTSSTTTTAAAAVTPTSLAPKPSSSNCNFLAKLLRKLKKRSRVLCSTTG 60

Query: 64  DSTTPFQCRYDPLSYSLNFDTTGCGSLLDDHYYHYFCAFSSRFASNPGNLSTHSLPPVTL 123
           +S++PFQCRYDPLSYSLNFDT+GCGSLLDDHYY YFCAFSSRFASNPGNLSTHSLPPVTL
Sbjct: 61  ESSSPFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTL 120

[Close]

BLAST of PI0017787 vs. ExPASy TrEMBL
Match: A0A6J1IQV7 (uncharacterized protein LOC111477613 OS=Cucurbita maxima OX=3661 GN=LOC111477613 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.7e-37
Identity = 90/124 (72.58%), Postives = 102/124 (82.26%), Query Frame = 0


Query: 1   MWLLWSPKNN-SPKTSTSSTTAAVTPTSLAPNPSSSHSNCLAKLLRKLKKRSRVLCSTSG 60
           MWLLW PKNN S    T +++AAVT TSLA   SSS+ NC AKLLRKLKKRSRVL ST+G
Sbjct: 1   MWLLWWPKNNASSGAKTCTSSAAVTATSLARKASSSNYNCFAKLLRKLKKRSRVLRSTAG 60

Query: 61  DSTTPFQCRYDPLSYSLNFDTTGCGSLLDDHYYHYFCAFSSRFASNPGNLSTHSLPPVTL 120
           +S++ FQCRYDPLSYSLNFDT+GCG LLD+HYY Y CAFSSRFASNPGN+S HS P VT+
Sbjct: 61  ESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQY-CAFSSRFASNPGNVS-HSAPVVTV 120

Query: 121 PTSR 124
            TSR
Sbjct: 121 TTSR 122

[Close]

BLAST of PI0017787 vs. ExPASy TrEMBL
Match: A0A6J1EFV9 (uncharacterized protein LOC111433012 OS=Cucurbita moschata OX=3662 GN=LOC111433012 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.9e-37
Identity = 89/124 (71.77%), Postives = 101/124 (81.45%), Query Frame = 0


Query: 1   MWLLWSPKNN-SPKTSTSSTTAAVTPTSLAPNPSSSHSNCLAKLLRKLKKRSRVLCSTSG 60
           MWLLW PKNN S    T +++AAVT TSLA   SSS+ NC AKLLRKLKKRSRVL ST+G
Sbjct: 1   MWLLWWPKNNASADAKTCTSSAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRSTAG 60

Query: 61  DSTTPFQCRYDPLSYSLNFDTTGCGSLLDDHYYHYFCAFSSRFASNPGNLSTHSLPPVTL 120
           +S++ FQCRYDPLSYSLNFDT+GCG LLD+HYY Y CAFSSRFASNPGN+S HS P  T+
Sbjct: 61  ESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQY-CAFSSRFASNPGNVS-HSAPVATV 120

Query: 121 PTSR 124
            TSR
Sbjct: 121 TTSR 122

[Close]

BLAST of PI0017787 vs. ExPASy TrEMBL
Match: A0A6J1CYQ9 (uncharacterized protein LOC111015812 OS=Momordica charantia OX=3673 GN=LOC111015812 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 6.4e-37
Identity = 94/126 (74.60%), Postives = 102/126 (80.95%), Query Frame = 0


Query: 1   MWLLWSPKNNSP--KTSTSSTTAAVTPTSLAPNPS-SSHSNCLAKLLRKLKKRSRVLCST 60
           MWLLW PK  S   KT+TSS TAAVT TSLA   S SSH NC+AKLLRKLKKR RVLCST
Sbjct: 4   MWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASPSSHCNCVAKLLRKLKKRGRVLCST 63

Query: 61  SGDSTTPFQCRYDPLSYSLNFDTTGCGSLLDDHYYHYFCAFSSRFASNPGNLSTHSLPPV 120
           SG+S+  FQCRYDPLSYSLNFDT+GCGSLLD+ YY  FCAFSSRFASNPGN S HS+P V
Sbjct: 64  SGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQ-FCAFSSRFASNPGNAS-HSVPDV 123

Query: 121 TLPTSR 124
           T+  SR
Sbjct: 124 TVTASR 126

[Close]

BLAST of PI0017787 vs. NCBI nr
Match: KAA0052435.1 (hypothetical protein E6C27_scaffold120G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 224.2 bits (570), Expect = 6.3e-55
Identity = 108/120 (90.00%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 4   LWSPKNNSPKTSTSSTTAAVTPTSLAPNPSSSHSNCLAKLLRKLKKRSRVLCSTSGDSTT 63
           +W PKNN+PKT+TSSTTAAVTPTSLAP PSSSH NCLAKLLRKLKKRSRVLC+T+GDS++
Sbjct: 1   MWLPKNNAPKTTTSSTTAAVTPTSLAPKPSSSHCNCLAKLLRKLKKRSRVLCTTTGDSSS 60

Query: 64  PFQCRYDPLSYSLNFDTTGCGSLLDDHYYHYFCAFSSRFASNPGNLSTHSLPPVTLPTSR 123
           PFQCRYDPLSYSLNFDT+GCGSLLDDHYY YFCAFSSRFASNPGNLSTHSLPPVTLPTSR
Sbjct: 61  PFQCRYDPLSYSLNFDTSGCGSLLDDHYYQYFCAFSSRFASNPGNLSTHSLPPVTLPTSR 120

[Close]

BLAST of PI0017787 vs. NCBI nr
Match: XP_023543928.1 (uncharacterized protein LOC111803650 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.4 bits (420), Expect = 1.6e-37
Identity = 93/126 (73.81%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 1   MWLLWSPKNNS---PKTSTSSTTAAVTPTSLAPNPSSSHSNCLAKLLRKLKKRSRVLCST 60
           MWLLW PKNN+    KT TSS +AAVT TSLA   SSS+ NC AKLLRKLKKRSRVL ST
Sbjct: 1   MWLLWWPKNNASAGAKTCTSS-SAAVTATSLARKASSSNCNCFAKLLRKLKKRSRVLRST 60

Query: 61  SGDSTTPFQCRYDPLSYSLNFDTTGCGSLLDDHYYHYFCAFSSRFASNPGNLSTHSLPPV 120
           +G+S++ FQCRYDPLSYSLNFDT+GCG LLD+HYY Y CAFSSRFASNPGN+S HS P V
Sbjct: 61  AGESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQY-CAFSSRFASNPGNVS-HSAPVV 120

Query: 121 TLPTSR 124
           T+ TSR
Sbjct: 121 TVTTSR 123

[Close]

BLAST of PI0017787 vs. NCBI nr
Match: XP_022977244.1 (uncharacterized protein LOC111477613 [Cucurbita maxima])

HSP 1 Score: 165.2 bits (417), Expect = 3.5e-37
Identity = 90/124 (72.58%), Postives = 102/124 (82.26%), Query Frame = 0


Query: 1   MWLLWSPKNN-SPKTSTSSTTAAVTPTSLAPNPSSSHSNCLAKLLRKLKKRSRVLCSTSG 60
           MWLLW PKNN S    T +++AAVT TSLA   SSS+ NC AKLLRKLKKRSRVL ST+G
Sbjct: 1   MWLLWWPKNNASSGAKTCTSSAAVTATSLARKASSSNYNCFAKLLRKLKKRSRVLRSTAG 60

Query: 61  DSTTPFQCRYDPLSYSLNFDTTGCGSLLDDHYYHYFCAFSSRFASNPGNLSTHSLPPVTL 120
           +S++ FQCRYDPLSYSLNFDT+GCG LLD+HYY Y CAFSSRFASNPGN+S HS P VT+
Sbjct: 61  ESSSTFQCRYDPLSYSLNFDTSGCGGLLDEHYYQY-CAFSSRFASNPGNVS-HSAPVVTV 120

Query: 121 PTSR 124
            TSR
Sbjct: 121 TTSR 122

[Close]

BLAST of PI0017787 vs. NCBI nr
Match: KAG6594391.1 (hypothetical protein SDJN03_10944, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164.9 bits (416), Expect = 4.5e-37
Identity = 91/125 (72.80%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 1   MWLLWSPKNNS--PKTSTSSTTAAVTPTSLAPNPSSSHSNCLAKLLRKLKKRSRVLCSTS 60
           MWLLW PKN+S   KTSTSS TAAVT TSLA   SSSH N +AKLLRKLKKR RVLCST+
Sbjct: 1   MWLLWWPKNSSAAAKTSTSSATAAVTATSLATKVSSSHCNRIAKLLRKLKKRGRVLCSTT 60

Query: 61  GDSTTPFQCRYDPLSYSLNFDTTGCGSLLDDHYYHYFCAFSSRFASNPGNLSTHSLPPVT 120
           G+S++ FQCRYDPLSYSLNFDT+GCGSLLD+HYY  FCAFSSRFASNPG +S    P  T
Sbjct: 61  GESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQ-FCAFSSRFASNPGTVS-RPAPDGT 120

Query: 121 LPTSR 124
           +  SR
Sbjct: 121 VTASR 123

[Close]

BLAST of PI0017787 vs. NCBI nr
Match: KAG7026395.1 (hypothetical protein SDJN02_10395, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 164.9 bits (416), Expect = 4.5e-37
Identity = 91/125 (72.80%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 1   MWLLWSPKNNS--PKTSTSSTTAAVTPTSLAPNPSSSHSNCLAKLLRKLKKRSRVLCSTS 60
           MWLLW PKN+S   KTSTSS TAAVT TSLA   SSSH N +AKLLRKLKKR RVLCST+
Sbjct: 4   MWLLWWPKNSSAAAKTSTSSATAAVTATSLATKVSSSHCNRIAKLLRKLKKRGRVLCSTT 63

Query: 61  GDSTTPFQCRYDPLSYSLNFDTTGCGSLLDDHYYHYFCAFSSRFASNPGNLSTHSLPPVT 120
           G+S++ FQCRYDPLSYSLNFDT+GCGSLLD+HYY  FCAFSSRFASNPG +S    P  T
Sbjct: 64  GESSSNFQCRYDPLSYSLNFDTSGCGSLLDEHYYQ-FCAFSSRFASNPGTVS-RPAPDGT 123

Query: 121 LPTSR 124
           +  SR
Sbjct: 124 VTASR 126

[Close]

BLAST of PI0017787 vs. TAIR 10
Match: AT4G19980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING: 4 anthesis; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 5.2e-15
Identity = 47/97 (48.45%), Postives = 62/97 (63.92%), Query Frame = 0


Query: 17  SSTTAAVTPTSLAPNPSSSHS-NCLAKLLRKLKKRSRVL--CSTSGDSTTPFQCRYDPLS 76
           ++T  AVT  S  P P+ +    CLA+L+RKLKK+ R+L   ST+    +  QCRYDP+S
Sbjct: 12  ATTATAVTKKSNVPTPTPNCCVTCLARLIRKLKKKGRLLLATSTARRQGSSLQCRYDPMS 71

Query: 77  YSLNFDTTGCGSLLDDH-YYHYFCAFSSRFASNPGNL 110
           YSLNFD   CG+L DD  YY  F AFSSR+ +   N+
Sbjct: 72  YSLNFDGGACGTLPDDEDYYLRFYAFSSRYVTTTNNI 108

The following BLAST results are available for this feature:

BLAST of PI0017787 vs.


Match Name	E-value	Identity	Description

BLAST of PI0017787 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UFE1	3.0e-55	90.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KMC6	1.0e-50	84.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G526510 PE=4 SV=1	[more]
A0A6J1IQV7	1.7e-37	72.58	uncharacterized protein LOC111477613 OS=Cucurbita maxima OX=3661 GN=LOC111477613...	[more]
A0A6J1EFV9	2.9e-37	71.77	uncharacterized protein LOC111433012 OS=Cucurbita moschata OX=3662 GN=LOC1114330...	[more]
A0A6J1CYQ9	6.4e-37	74.60	uncharacterized protein LOC111015812 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]

BLAST of PI0017787 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052435.1	6.3e-55	90.00	hypothetical protein E6C27_scaffold120G00320 [Cucumis melo var. makuwa]	[more]
XP_023543928.1	1.6e-37	73.81	uncharacterized protein LOC111803650 [Cucurbita pepo subsp. pepo]	[more]
XP_022977244.1	3.5e-37	72.58	uncharacterized protein LOC111477613 [Cucurbita maxima]	[more]
KAG6594391.1	4.5e-37	72.80	hypothetical protein SDJN03_10944, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7026395.1	4.5e-37	72.80	hypothetical protein SDJN02_10395, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of PI0017787 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19980.1	5.2e-15	48.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..37
None	No IPR available	PANTHER	PTHR33168	STRESS INDUCED PROTEIN-RELATED	coord: 13..106
None	No IPR available	PANTHER	PTHR33168:SF42	EXPRESSED PROTEIN	coord: 13..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017787.1	PI0017787.1	mRNA