Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTCTCTGATCTTCTTCAACTAAAGCAACTTTTGAAAGAACAAAGGCCAATGCCACTTGCTCTGCTGAAAGAGCGGACTCTACTTCCTAAACAACTGTTCCTAATTCAGCTATTCCAAAACCTTCTCTCTCTACTTTGTTCCCGAGACCCCTCATCAGGATCGATACCCAGTTTTGAGATCAGGTTTCATGAATGAGAAATAGGAGTTTCACGGGTTGACGTATCATCCACTGGCCTTCATCAGGATTGGTACGCAGACTTGGAAGATGAAGATGTTGCTGATTTGGTTGATTTTCTGGCTTCAAAGATGCAAGCCAGAAAAGAGAGAAAAGAAAAGGAGGAAAGAAAAATGCAAGAAGAGCTCGCAGACTACGCGACAAAGGCAATAGGCGAAGAGAGAAGGAGGAATCAAGAAGGAAAGAAACGGAGTCCTCTTCGCCTATTGCAGATACGAATTTCGAGAGGGTTGCAAAGAAGGCTCTCAAGAAGAAGGAGAAAGTGGCCGAAGGCATGCCAAGGCCAAAGAAGCTGCATAGAAAGTGAAAGTTCTCGCAAAGGCGAGAAAAGATGAAAGGTTGCGGGAGCAGGAGGAGCTCCGCAACAAAGTGGACCAAGTTTCCTCTTTGGTGGACAAGGGGAAGGCGATAAGAACCCTCAGAAATGAGATTGCTGAGGAATTCGATAAGAAATTAGAAGAAATGAGTCCTTTAGAGGACGAAGTGGTGAAGCCCGCCAAAACTAGGAATATCATAATTAAAAAGAAAATCCTCATGGACCAAGTCGTGAAAAGAAGAGAAGAAAAGGCGAAGAAAAATGGTCCTGAAGATGAGGCGGCACAAGAAATAGAAGAAAGCCTCGCCCAGGGTGATGAGGAAGAACCCATCACCGTGAAGAACATTTCAAGGCATTTCAAGATAGAGAAGGAGCTCTATCCCGCATTCAAGTGA
mRNA sequence
ATGAACCTCTCTGATCTTCTTCAACTAAAGCAACTTTTGAAAGAACAAAGGCCAATGCCACTTGCTCTGCTGAAAGAGCGGACTCTACTTCCTAAACAACTGTTCCTAATTCAGCTATTCCAAAACCTTCTCTCTCTACTTTGTTCCCGAGACCCCTCATCAGGATCGATACCCAGAGTTTCACGGGTTGACGTATCATCCACTGGCCTTCATCAGGATTGGTACGCAGACTTGGAAGATGAAGATGTTGCTGATTTGGTTGATTTTCTGGCTTCAAAGATGCAAGCCAGAAAAGAGAGAAAAGAAAAGGAGGAAAGAAAAATGCAAGAAGAGCTCGCAGACTACGCGACAAAGGCAATAGGCGAAGAGAGAAGGAGGAATCAAGAAGGAAAGAAACGGATGAAAGTTCTCGCAAAGGCGAGAAAAGATGAAAGGTTGCGGGAGCAGGAGGAGCTCCGCAACAAAGTGGACCAAGTTTCCTCTTTGGTGGACAAGGGGAAGGCGATAAGAACCCTCAGAAATGAGATTGCTGAGGAATTCGATAAGAAATTAGAAGAAATGAGTCCTTTAGAGGACGAAGTGGTGAAGCCCGCCAAAACTAGGAATATCATAATTAAAAAGAAAATCCTCATGGACCAAGTCGTGAAAAGAAGAGAAGAAAAGGCGAAGAAAAATGGTCCTGAAGATGAGGCGGCACAAGAAATAGAAGAAAGCCTCGCCCAGGGTGATGAGGAAGAACCCATCACCGTGAAGAACATTTCAAGGCATTTCAAGATAGAGAAGGAGCTCTATCCCGCATTCAAGTGA
Coding sequence (CDS)
ATGAACCTCTCTGATCTTCTTCAACTAAAGCAACTTTTGAAAGAACAAAGGCCAATGCCACTTGCTCTGCTGAAAGAGCGGACTCTACTTCCTAAACAACTGTTCCTAATTCAGCTATTCCAAAACCTTCTCTCTCTACTTTGTTCCCGAGACCCCTCATCAGGATCGATACCCAGAGTTTCACGGGTTGACGTATCATCCACTGGCCTTCATCAGGATTGGTACGCAGACTTGGAAGATGAAGATGTTGCTGATTTGGTTGATTTTCTGGCTTCAAAGATGCAAGCCAGAAAAGAGAGAAAAGAAAAGGAGGAAAGAAAAATGCAAGAAGAGCTCGCAGACTACGCGACAAAGGCAATAGGCGAAGAGAGAAGGAGGAATCAAGAAGGAAAGAAACGGATGAAAGTTCTCGCAAAGGCGAGAAAAGATGAAAGGTTGCGGGAGCAGGAGGAGCTCCGCAACAAAGTGGACCAAGTTTCCTCTTTGGTGGACAAGGGGAAGGCGATAAGAACCCTCAGAAATGAGATTGCTGAGGAATTCGATAAGAAATTAGAAGAAATGAGTCCTTTAGAGGACGAAGTGGTGAAGCCCGCCAAAACTAGGAATATCATAATTAAAAAGAAAATCCTCATGGACCAAGTCGTGAAAAGAAGAGAAGAAAAGGCGAAGAAAAATGGTCCTGAAGATGAGGCGGCACAAGAAATAGAAGAAAGCCTCGCCCAGGGTGATGAGGAAGAACCCATCACCGTGAAGAACATTTCAAGGCATTTCAAGATAGAGAAGGAGCTCTATCCCGCATTCAAGTGA
Protein sequence
MNLSDLLQLKQLLKEQRPMPLALLKERTLLPKQLFLIQLFQNLLSLLCSRDPSSGSIPRVSRVDVSSTGLHQDWYADLEDEDVADLVDFLASKMQARKERKEKEERKMQEELADYATKAIGEERRRNQEGKKRMKVLAKARKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPAKTRNIIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEEPITVKNISRHFKIEKELYPAFK
Homology
BLAST of PI0017473 vs. ExPASy TrEMBL
Match:
A0A5A7T4G8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001100 PE=4 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 2.1e-16
Identity = 59/126 (46.83%), Postives = 86/126 (68.25%), Query Frame = 0
Query: 141 RKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPA-K 200
+K+ +LRE++ L NK+++V + KGKA +T E+ EEF++KL+ +S LEDE+V + K
Sbjct: 4 KKEVKLRERKGLLNKIEKVLLSLKKGKARKTPSEELVEEFERKLDNLSHLEDEMVNSSKK 63
Query: 201 TRNIIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEEPITVKNISRHFKI 260
+ + IKK +L +Q VKRREEK KK GP E E EE L +G++ EP IS++FKI
Sbjct: 64 KKKVTIKKSVLKEQFVKRREEKEKKKGPLSEVTLEEEEDL-KGEKNEPFCGNTISKYFKI 123
Query: 261 EKELYP 266
E EL+P
Sbjct: 124 ENELFP 128
BLAST of PI0017473 vs. ExPASy TrEMBL
Match:
A0A5A7TGV4 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00910 PE=4 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 2.3e-15
Identity = 60/135 (44.44%), Postives = 92/135 (68.15%), Query Frame = 0
Query: 132 KRMKVLAKARKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLE 191
+R LA+ +K+ +LR+ EEL NKVD+++ V+KGK E +EF+K+++E SPLE
Sbjct: 32 QRAMALAEGKKEIKLRQPEELLNKVDKLALSVEKGKEKEKTFEEFYKEFEKEIDEFSPLE 91
Query: 192 DEVV-KPAKTRNIIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEEPITV 251
D VV +PAK RN+ +KKK+L DQ KRR+EK K+ GP+ E+ +E+E S ++E ++
Sbjct: 92 DNVVERPAKKRNVTMKKKVLRDQFAKRRKEK-KRRGPQKESEKEVERS----EKEGSLSE 151
Query: 252 KNISRHFKIEKELYP 266
+++S F EK LYP
Sbjct: 152 RHVSILFMREKGLYP 161
BLAST of PI0017473 vs. ExPASy TrEMBL
Match:
A0A0A0K7W9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 1.3e-13
Identity = 51/96 (53.12%), Postives = 66/96 (68.75%), Query Frame = 0
Query: 132 KRMKVLAKARKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLE 191
+R K L + +K +LREQ+EL NK+DQ KGK +T EI EEF++KLE++SPLE
Sbjct: 3 QRFKALMQDKKKVKLREQKELLNKIDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPLE 62
Query: 192 DEVVKPAKTRNIIIKKKILMDQVVKRREEKAKKNGP 228
DEVVKP K + + +KK +L Q KRREEK KK GP
Sbjct: 63 DEVVKPLK-KKVTVKKSVLKKQFDKRREEKEKKKGP 97
BLAST of PI0017473 vs. ExPASy TrEMBL
Match:
A0A5D3E4B8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00860 PE=4 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 8.2e-13
Identity = 49/100 (49.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query: 167 KAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPA-KTRNIIIKKKILMDQVVKRREEKAKKN 226
K+ +T E+ EEF++KL+ +SPL+DEVVK + K + + IKK +L +Q +KRREEK KK
Sbjct: 19 KSRKTPSEELVEEFERKLDNLSPLKDEVVKSSKKKKKVTIKKSVLKEQFIKRREEKEKKK 78
Query: 227 GPEDEAAQEIEESLAQGDEEEPITVKNISRHFKIEKELYP 266
GP E E EE L +G++ EP IS++FKIE EL+P
Sbjct: 79 GPLSEVTLEEEEDL-KGEKNEPFCGNTISKYFKIENELFP 117
BLAST of PI0017473 vs. ExPASy TrEMBL
Match:
A0A5A7SVU7 (Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold597G00220 PE=4 SV=1)
HSP 1 Score: 79.7 bits (195), Expect = 2.0e-11
Identity = 71/184 (38.59%), Postives = 108/184 (58.70%), Query Frame = 0
Query: 82 DVADLVDFLASKMQARKERKEKEERKMQEELADYATKAIGEERRRNQEGKKRMKVLAKAR 141
D +DL LA + +K R+EK + K +E+ E + R ++G+K K+R
Sbjct: 3 DDSDLAALLAMVEKRKKTREEKNKLKEKEQ----------EHKEREEKGRKE----KKSR 62
Query: 142 KDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPAKTR 201
K+ER +E+E K ++ GKA RT +I E+F+KKLEE+SPLEDEVVKP+KT+
Sbjct: 63 KNERRKEEE---RKKERKKRKRRNGKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTK 122
Query: 202 N-IIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEE---PITVKNISRHF 261
+ + IKK++L +Q K+REE +K GP +E QE ++ +G+ EE +T N S
Sbjct: 123 SKVTIKKQVLREQFAKKREEN-EKRGPRNEEVQEEKKGDQEGETEELSPQVTTFNHSSLS 168
BLAST of PI0017473 vs. NCBI nr
Match:
KAA0038260.1 (protein MNN4-like [Cucumis melo var. makuwa])
HSP 1 Score: 96.3 bits (238), Expect = 4.3e-16
Identity = 59/126 (46.83%), Postives = 86/126 (68.25%), Query Frame = 0
Query: 141 RKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPA-K 200
+K+ +LRE++ L NK+++V + KGKA +T E+ EEF++KL+ +S LEDE+V + K
Sbjct: 4 KKEVKLRERKGLLNKIEKVLLSLKKGKARKTPSEELVEEFERKLDNLSHLEDEMVNSSKK 63
Query: 201 TRNIIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEEPITVKNISRHFKI 260
+ + IKK +L +Q VKRREEK KK GP E E EE L +G++ EP IS++FKI
Sbjct: 64 KKKVTIKKSVLKEQFVKRREEKEKKKGPLSEVTLEEEEDL-KGEKNEPFCGNTISKYFKI 123
Query: 261 EKELYP 266
E EL+P
Sbjct: 124 ENELFP 128
BLAST of PI0017473 vs. NCBI nr
Match:
KAA0041276.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucumis melo var. makuwa])
HSP 1 Score: 92.8 bits (229), Expect = 4.8e-15
Identity = 60/135 (44.44%), Postives = 92/135 (68.15%), Query Frame = 0
Query: 132 KRMKVLAKARKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLE 191
+R LA+ +K+ +LR+ EEL NKVD+++ V+KGK E +EF+K+++E SPLE
Sbjct: 32 QRAMALAEGKKEIKLRQPEELLNKVDKLALSVEKGKEKEKTFEEFYKEFEKEIDEFSPLE 91
Query: 192 DEVV-KPAKTRNIIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEEPITV 251
D VV +PAK RN+ +KKK+L DQ KRR+EK K+ GP+ E+ +E+E S ++E ++
Sbjct: 92 DNVVERPAKKRNVTMKKKVLRDQFAKRRKEK-KRRGPQKESEKEVERS----EKEGSLSE 151
Query: 252 KNISRHFKIEKELYP 266
+++S F EK LYP
Sbjct: 152 RHVSILFMREKGLYP 161
BLAST of PI0017473 vs. NCBI nr
Match:
KGN44432.1 (hypothetical protein Csa_016511 [Cucumis sativus])
HSP 1 Score: 87.0 bits (214), Expect = 2.6e-13
Identity = 51/96 (53.12%), Postives = 66/96 (68.75%), Query Frame = 0
Query: 132 KRMKVLAKARKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLE 191
+R K L + +K +LREQ+EL NK+DQ KGK +T EI EEF++KLE++SPLE
Sbjct: 3 QRFKALMQDKKKVKLREQKELLNKIDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPLE 62
Query: 192 DEVVKPAKTRNIIIKKKILMDQVVKRREEKAKKNGP 228
DEVVKP K + + +KK +L Q KRREEK KK GP
Sbjct: 63 DEVVKPLK-KKVTVKKSVLKKQFDKRREEKEKKKGP 97
BLAST of PI0017473 vs. NCBI nr
Match:
TYK30659.1 (hypothetical protein E5676_scaffold84664G00860 [Cucumis melo var. makuwa])
HSP 1 Score: 84.3 bits (207), Expect = 1.7e-12
Identity = 49/100 (49.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query: 167 KAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPA-KTRNIIIKKKILMDQVVKRREEKAKKN 226
K+ +T E+ EEF++KL+ +SPL+DEVVK + K + + IKK +L +Q +KRREEK KK
Sbjct: 19 KSRKTPSEELVEEFERKLDNLSPLKDEVVKSSKKKKKVTIKKSVLKEQFIKRREEKEKKK 78
Query: 227 GPEDEAAQEIEESLAQGDEEEPITVKNISRHFKIEKELYP 266
GP E E EE L +G++ EP IS++FKIE EL+P
Sbjct: 79 GPLSEVTLEEEEDL-KGEKNEPFCGNTISKYFKIENELFP 117
BLAST of PI0017473 vs. NCBI nr
Match:
KAA0035382.1 (gag-protease polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 79.7 bits (195), Expect = 4.2e-11
Identity = 71/184 (38.59%), Postives = 108/184 (58.70%), Query Frame = 0
Query: 82 DVADLVDFLASKMQARKERKEKEERKMQEELADYATKAIGEERRRNQEGKKRMKVLAKAR 141
D +DL LA + +K R+EK + K +E+ E + R ++G+K K+R
Sbjct: 3 DDSDLAALLAMVEKRKKTREEKNKLKEKEQ----------EHKEREEKGRKE----KKSR 62
Query: 142 KDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPAKTR 201
K+ER +E+E K ++ GKA RT +I E+F+KKLEE+SPLEDEVVKP+KT+
Sbjct: 63 KNERRKEEE---RKKERKKRKRRNGKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTK 122
Query: 202 N-IIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEE---PITVKNISRHF 261
+ + IKK++L +Q K+REE +K GP +E QE ++ +G+ EE +T N S
Sbjct: 123 SKVTIKKQVLREQFAKKREEN-EKRGPRNEEVQEEKKGDQEGETEELSPQVTTFNHSSLS 168
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T4G8 | 2.1e-16 | 46.83 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00... | [more] |
A0A5A7TGV4 | 2.3e-15 | 44.44 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G009... | [more] |
A0A0A0K7W9 | 1.3e-13 | 53.13 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1 | [more] |
A0A5D3E4B8 | 8.2e-13 | 49.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7SVU7 | 2.0e-11 | 38.59 | Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
Match Name | E-value | Identity | Description | |
KAA0038260.1 | 4.3e-16 | 46.83 | protein MNN4-like [Cucumis melo var. makuwa] | [more] |
KAA0041276.1 | 4.8e-15 | 44.44 | protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucu... | [more] |
KGN44432.1 | 2.6e-13 | 53.13 | hypothetical protein Csa_016511 [Cucumis sativus] | [more] |
TYK30659.1 | 1.7e-12 | 49.00 | hypothetical protein E5676_scaffold84664G00860 [Cucumis melo var. makuwa] | [more] |
KAA0035382.1 | 4.2e-11 | 38.59 | gag-protease polyprotein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |