PI0017473 (gene) Melon (PI 482460) v1

Overview


Name	PI0017473
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein MNN4-like
Location	chr01: 13416958 .. 13417909 (+)
RNA-Seq Expression	PI0017473
Synteny	PI0017473

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCTCTCTGATCTTCTTCAACTAAAGCAACTTTTGAAAGAACAAAGGCCAATGCCACTTGCTCTGCTGAAAGAGCGGACTCTACTTCCTAAACAACTGTTCCTAATTCAGCTATTCCAAAACCTTCTCTCTCTACTTTGTTCCCGAGACCCCTCATCAGGATCGATACCCAGTTTTGAGATCAGGTTTCATGAATGAGAAATAGGAGTTTCACGGGTTGACGTATCATCCACTGGCCTTCATCAGGATTGGTACGCAGACTTGGAAGATGAAGATGTTGCTGATTTGGTTGATTTTCTGGCTTCAAAGATGCAAGCCAGAAAAGAGAGAAAAGAAAAGGAGGAAAGAAAAATGCAAGAAGAGCTCGCAGACTACGCGACAAAGGCAATAGGCGAAGAGAGAAGGAGGAATCAAGAAGGAAAGAAACGGAGTCCTCTTCGCCTATTGCAGATACGAATTTCGAGAGGGTTGCAAAGAAGGCTCTCAAGAAGAAGGAGAAAGTGGCCGAAGGCATGCCAAGGCCAAAGAAGCTGCATAGAAAGTGAAAGTTCTCGCAAAGGCGAGAAAAGATGAAAGGTTGCGGGAGCAGGAGGAGCTCCGCAACAAAGTGGACCAAGTTTCCTCTTTGGTGGACAAGGGGAAGGCGATAAGAACCCTCAGAAATGAGATTGCTGAGGAATTCGATAAGAAATTAGAAGAAATGAGTCCTTTAGAGGACGAAGTGGTGAAGCCCGCCAAAACTAGGAATATCATAATTAAAAAGAAAATCCTCATGGACCAAGTCGTGAAAAGAAGAGAAGAAAAGGCGAAGAAAAATGGTCCTGAAGATGAGGCGGCACAAGAAATAGAAGAAAGCCTCGCCCAGGGTGATGAGGAAGAACCCATCACCGTGAAGAACATTTCAAGGCATTTCAAGATAGAGAAGGAGCTCTATCCCGCATTCAAGTGA

mRNA sequence

ATGAACCTCTCTGATCTTCTTCAACTAAAGCAACTTTTGAAAGAACAAAGGCCAATGCCACTTGCTCTGCTGAAAGAGCGGACTCTACTTCCTAAACAACTGTTCCTAATTCAGCTATTCCAAAACCTTCTCTCTCTACTTTGTTCCCGAGACCCCTCATCAGGATCGATACCCAGAGTTTCACGGGTTGACGTATCATCCACTGGCCTTCATCAGGATTGGTACGCAGACTTGGAAGATGAAGATGTTGCTGATTTGGTTGATTTTCTGGCTTCAAAGATGCAAGCCAGAAAAGAGAGAAAAGAAAAGGAGGAAAGAAAAATGCAAGAAGAGCTCGCAGACTACGCGACAAAGGCAATAGGCGAAGAGAGAAGGAGGAATCAAGAAGGAAAGAAACGGATGAAAGTTCTCGCAAAGGCGAGAAAAGATGAAAGGTTGCGGGAGCAGGAGGAGCTCCGCAACAAAGTGGACCAAGTTTCCTCTTTGGTGGACAAGGGGAAGGCGATAAGAACCCTCAGAAATGAGATTGCTGAGGAATTCGATAAGAAATTAGAAGAAATGAGTCCTTTAGAGGACGAAGTGGTGAAGCCCGCCAAAACTAGGAATATCATAATTAAAAAGAAAATCCTCATGGACCAAGTCGTGAAAAGAAGAGAAGAAAAGGCGAAGAAAAATGGTCCTGAAGATGAGGCGGCACAAGAAATAGAAGAAAGCCTCGCCCAGGGTGATGAGGAAGAACCCATCACCGTGAAGAACATTTCAAGGCATTTCAAGATAGAGAAGGAGCTCTATCCCGCATTCAAGTGA

Coding sequence (CDS)

ATGAACCTCTCTGATCTTCTTCAACTAAAGCAACTTTTGAAAGAACAAAGGCCAATGCCACTTGCTCTGCTGAAAGAGCGGACTCTACTTCCTAAACAACTGTTCCTAATTCAGCTATTCCAAAACCTTCTCTCTCTACTTTGTTCCCGAGACCCCTCATCAGGATCGATACCCAGAGTTTCACGGGTTGACGTATCATCCACTGGCCTTCATCAGGATTGGTACGCAGACTTGGAAGATGAAGATGTTGCTGATTTGGTTGATTTTCTGGCTTCAAAGATGCAAGCCAGAAAAGAGAGAAAAGAAAAGGAGGAAAGAAAAATGCAAGAAGAGCTCGCAGACTACGCGACAAAGGCAATAGGCGAAGAGAGAAGGAGGAATCAAGAAGGAAAGAAACGGATGAAAGTTCTCGCAAAGGCGAGAAAAGATGAAAGGTTGCGGGAGCAGGAGGAGCTCCGCAACAAAGTGGACCAAGTTTCCTCTTTGGTGGACAAGGGGAAGGCGATAAGAACCCTCAGAAATGAGATTGCTGAGGAATTCGATAAGAAATTAGAAGAAATGAGTCCTTTAGAGGACGAAGTGGTGAAGCCCGCCAAAACTAGGAATATCATAATTAAAAAGAAAATCCTCATGGACCAAGTCGTGAAAAGAAGAGAAGAAAAGGCGAAGAAAAATGGTCCTGAAGATGAGGCGGCACAAGAAATAGAAGAAAGCCTCGCCCAGGGTGATGAGGAAGAACCCATCACCGTGAAGAACATTTCAAGGCATTTCAAGATAGAGAAGGAGCTCTATCCCGCATTCAAGTGA

Protein sequence

MNLSDLLQLKQLLKEQRPMPLALLKERTLLPKQLFLIQLFQNLLSLLCSRDPSSGSIPRVSRVDVSSTGLHQDWYADLEDEDVADLVDFLASKMQARKERKEKEERKMQEELADYATKAIGEERRRNQEGKKRMKVLAKARKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPAKTRNIIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEEPITVKNISRHFKIEKELYPAFK

Homology

[Close]

BLAST of PI0017473 vs. ExPASy TrEMBL
Match: A0A5A7T4G8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001100 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.1e-16
Identity = 59/126 (46.83%), Postives = 86/126 (68.25%), Query Frame = 0


Query: 141 RKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPA-K 200
           +K+ +LRE++ L NK+++V   + KGKA +T   E+ EEF++KL+ +S LEDE+V  + K
Sbjct: 4   KKEVKLRERKGLLNKIEKVLLSLKKGKARKTPSEELVEEFERKLDNLSHLEDEMVNSSKK 63

Query: 201 TRNIIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEEPITVKNISRHFKI 260
            + + IKK +L +Q VKRREEK KK GP  E   E EE L +G++ EP     IS++FKI
Sbjct: 64  KKKVTIKKSVLKEQFVKRREEKEKKKGPLSEVTLEEEEDL-KGEKNEPFCGNTISKYFKI 123

Query: 261 EKELYP 266
           E EL+P
Sbjct: 124 ENELFP 128

[Close]

BLAST of PI0017473 vs. ExPASy TrEMBL
Match: A0A5A7TGV4 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00910 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.3e-15
Identity = 60/135 (44.44%), Postives = 92/135 (68.15%), Query Frame = 0


Query: 132 KRMKVLAKARKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLE 191
           +R   LA+ +K+ +LR+ EEL NKVD+++  V+KGK       E  +EF+K+++E SPLE
Sbjct: 32  QRAMALAEGKKEIKLRQPEELLNKVDKLALSVEKGKEKEKTFEEFYKEFEKEIDEFSPLE 91

Query: 192 DEVV-KPAKTRNIIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEEPITV 251
           D VV +PAK RN+ +KKK+L DQ  KRR+EK K+ GP+ E+ +E+E S    ++E  ++ 
Sbjct: 92  DNVVERPAKKRNVTMKKKVLRDQFAKRRKEK-KRRGPQKESEKEVERS----EKEGSLSE 151

Query: 252 KNISRHFKIEKELYP 266
           +++S  F  EK LYP
Sbjct: 152 RHVSILFMREKGLYP 161

[Close]

BLAST of PI0017473 vs. ExPASy TrEMBL
Match: A0A0A0K7W9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-13
Identity = 51/96 (53.12%), Postives = 66/96 (68.75%), Query Frame = 0


Query: 132 KRMKVLAKARKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLE 191
           +R K L + +K  +LREQ+EL NK+DQ      KGK  +T   EI EEF++KLE++SPLE
Sbjct: 3   QRFKALMQDKKKVKLREQKELLNKIDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPLE 62

Query: 192 DEVVKPAKTRNIIIKKKILMDQVVKRREEKAKKNGP 228
           DEVVKP K + + +KK +L  Q  KRREEK KK GP
Sbjct: 63  DEVVKPLK-KKVTVKKSVLKKQFDKRREEKEKKKGP 97

[Close]

BLAST of PI0017473 vs. ExPASy TrEMBL
Match: A0A5D3E4B8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00860 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.2e-13
Identity = 49/100 (49.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 167 KAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPA-KTRNIIIKKKILMDQVVKRREEKAKKN 226
           K+ +T   E+ EEF++KL+ +SPL+DEVVK + K + + IKK +L +Q +KRREEK KK 
Sbjct: 19  KSRKTPSEELVEEFERKLDNLSPLKDEVVKSSKKKKKVTIKKSVLKEQFIKRREEKEKKK 78

Query: 227 GPEDEAAQEIEESLAQGDEEEPITVKNISRHFKIEKELYP 266
           GP  E   E EE L +G++ EP     IS++FKIE EL+P
Sbjct: 79  GPLSEVTLEEEEDL-KGEKNEPFCGNTISKYFKIENELFP 117

[Close]

BLAST of PI0017473 vs. ExPASy TrEMBL
Match: A0A5A7SVU7 (Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold597G00220 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.0e-11
Identity = 71/184 (38.59%), Postives = 108/184 (58.70%), Query Frame = 0


Query: 82  DVADLVDFLASKMQARKERKEKEERKMQEELADYATKAIGEERRRNQEGKKRMKVLAKAR 141
           D +DL   LA   + +K R+EK + K +E+          E + R ++G+K      K+R
Sbjct: 3   DDSDLAALLAMVEKRKKTREEKNKLKEKEQ----------EHKEREEKGRKE----KKSR 62

Query: 142 KDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPAKTR 201
           K+ER +E+E    K ++       GKA RT   +I E+F+KKLEE+SPLEDEVVKP+KT+
Sbjct: 63  KNERRKEEE---RKKERKKRKRRNGKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTK 122

Query: 202 N-IIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEE---PITVKNISRHF 261
           + + IKK++L +Q  K+REE  +K GP +E  QE ++   +G+ EE    +T  N S   
Sbjct: 123 SKVTIKKQVLREQFAKKREEN-EKRGPRNEEVQEEKKGDQEGETEELSPQVTTFNHSSLS 168

[Close]

BLAST of PI0017473 vs. NCBI nr
Match: KAA0038260.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 4.3e-16
Identity = 59/126 (46.83%), Postives = 86/126 (68.25%), Query Frame = 0


Query: 141 RKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPA-K 200
           +K+ +LRE++ L NK+++V   + KGKA +T   E+ EEF++KL+ +S LEDE+V  + K
Sbjct: 4   KKEVKLRERKGLLNKIEKVLLSLKKGKARKTPSEELVEEFERKLDNLSHLEDEMVNSSKK 63

Query: 201 TRNIIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEEPITVKNISRHFKI 260
            + + IKK +L +Q VKRREEK KK GP  E   E EE L +G++ EP     IS++FKI
Sbjct: 64  KKKVTIKKSVLKEQFVKRREEKEKKKGPLSEVTLEEEEDL-KGEKNEPFCGNTISKYFKI 123

Query: 261 EKELYP 266
           E EL+P
Sbjct: 124 ENELFP 128

[Close]

BLAST of PI0017473 vs. NCBI nr
Match: KAA0041276.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 4.8e-15
Identity = 60/135 (44.44%), Postives = 92/135 (68.15%), Query Frame = 0


Query: 132 KRMKVLAKARKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLE 191
           +R   LA+ +K+ +LR+ EEL NKVD+++  V+KGK       E  +EF+K+++E SPLE
Sbjct: 32  QRAMALAEGKKEIKLRQPEELLNKVDKLALSVEKGKEKEKTFEEFYKEFEKEIDEFSPLE 91

Query: 192 DEVV-KPAKTRNIIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEEPITV 251
           D VV +PAK RN+ +KKK+L DQ  KRR+EK K+ GP+ E+ +E+E S    ++E  ++ 
Sbjct: 92  DNVVERPAKKRNVTMKKKVLRDQFAKRRKEK-KRRGPQKESEKEVERS----EKEGSLSE 151

Query: 252 KNISRHFKIEKELYP 266
           +++S  F  EK LYP
Sbjct: 152 RHVSILFMREKGLYP 161

[Close]

BLAST of PI0017473 vs. NCBI nr
Match: KGN44432.1 (hypothetical protein Csa_016511 [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 2.6e-13
Identity = 51/96 (53.12%), Postives = 66/96 (68.75%), Query Frame = 0


Query: 132 KRMKVLAKARKDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLE 191
           +R K L + +K  +LREQ+EL NK+DQ      KGK  +T   EI EEF++KLE++SPLE
Sbjct: 3   QRFKALMQDKKKVKLREQKELLNKIDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPLE 62

Query: 192 DEVVKPAKTRNIIIKKKILMDQVVKRREEKAKKNGP 228
           DEVVKP K + + +KK +L  Q  KRREEK KK GP
Sbjct: 63  DEVVKPLK-KKVTVKKSVLKKQFDKRREEKEKKKGP 97

[Close]

BLAST of PI0017473 vs. NCBI nr
Match: TYK30659.1 (hypothetical protein E5676_scaffold84664G00860 [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-12
Identity = 49/100 (49.00%), Postives = 69/100 (69.00%), Query Frame = 0


Query: 167 KAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPA-KTRNIIIKKKILMDQVVKRREEKAKKN 226
           K+ +T   E+ EEF++KL+ +SPL+DEVVK + K + + IKK +L +Q +KRREEK KK 
Sbjct: 19  KSRKTPSEELVEEFERKLDNLSPLKDEVVKSSKKKKKVTIKKSVLKEQFIKRREEKEKKK 78

Query: 227 GPEDEAAQEIEESLAQGDEEEPITVKNISRHFKIEKELYP 266
           GP  E   E EE L +G++ EP     IS++FKIE EL+P
Sbjct: 79  GPLSEVTLEEEEDL-KGEKNEPFCGNTISKYFKIENELFP 117

[Close]

BLAST of PI0017473 vs. NCBI nr
Match: KAA0035382.1 (gag-protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 4.2e-11
Identity = 71/184 (38.59%), Postives = 108/184 (58.70%), Query Frame = 0


Query: 82  DVADLVDFLASKMQARKERKEKEERKMQEELADYATKAIGEERRRNQEGKKRMKVLAKAR 141
           D +DL   LA   + +K R+EK + K +E+          E + R ++G+K      K+R
Sbjct: 3   DDSDLAALLAMVEKRKKTREEKNKLKEKEQ----------EHKEREEKGRKE----KKSR 62

Query: 142 KDERLREQEELRNKVDQVSSLVDKGKAIRTLRNEIAEEFDKKLEEMSPLEDEVVKPAKTR 201
           K+ER +E+E    K ++       GKA RT   +I E+F+KKLEE+SPLEDEVVKP+KT+
Sbjct: 63  KNERRKEEE---RKKERKKRKRRNGKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTK 122

Query: 202 N-IIIKKKILMDQVVKRREEKAKKNGPEDEAAQEIEESLAQGDEEE---PITVKNISRHF 261
           + + IKK++L +Q  K+REE  +K GP +E  QE ++   +G+ EE    +T  N S   
Sbjct: 123 SKVTIKKQVLREQFAKKREEN-EKRGPRNEEVQEEKKGDQEGETEELSPQVTTFNHSSLS 168

The following BLAST results are available for this feature:

BLAST of PI0017473 vs.


Match Name	E-value	Identity	Description

BLAST of PI0017473 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T4G8	2.1e-16	46.83	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00...	[more]
A0A5A7TGV4	2.3e-15	44.44	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G009...	[more]
A0A0A0K7W9	1.3e-13	53.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1	[more]
A0A5D3E4B8	8.2e-13	49.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SVU7	2.0e-11	38.59	Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of PI0017473 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038260.1	4.3e-16	46.83	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0041276.1	4.8e-15	44.44	protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucu...	[more]
KGN44432.1	2.6e-13	53.13	hypothetical protein Csa_016511 [Cucumis sativus]	[more]
TYK30659.1	1.7e-12	49.00	hypothetical protein E5676_scaffold84664G00860 [Cucumis melo var. makuwa]	[more]
KAA0035382.1	4.2e-11	38.59	gag-protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of PI0017473 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017473.1	PI0017473.1	mRNA