Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATATGCGGAAGCGACTCAGTGCCTATGACCGTCAAGTGTCCCTCCTGCCTCTCGTCGGTCTGCCGCCCGTCCTACCTCTGCTTGAAAGAATGAAACATGAAAGGGTGAGTATAAACTTATACTCAGTAAAGGGGAAAAACTACTACTAAGAAGCTAGGGTTGGATAGGTATCTCCCTATGTCATCCCGGTGCCCGGCAGTCTAGGAAATCCCGTAGGAGTTTCCACATGAGTTTGGTGGCCCGTAGGTCGCACCCATATCAGTCTTGATCCCGTCAGATGCACTATAGTCCGGGGTTCCCGTCGGATACTTCCATCAGAGCTAGTGATCCCGTAGGATGCACCTATCAGTCTGGTGTTCCGTAGGAGACACCTTCAGGCAACTCAGGGATGTGTGACATAGCTAGAAATAGGTATCCCCAGAGTACATACAACAATCATGCAAGGCTGGAAAACACAATCACAGTCTGGGAATCACGTAGGAGTTCCACTCAGTCTGGTGGCCCGTTGGTCGCACCCATAAGTCATACATGAAACATGATACATATAAAACATAGTCATACTGAACATGGCATAATTTCATAACATGATGTACAGAGTTCAGAACCATAATTTACTGATTGGGGTTATCTGACGGAGGCATCAATCCATATGGAGATTTATCGACCAAGTATAGTTGTTGCCCTGTGATTGCTACAATATATAACCTTCCCCATGGCTGTGTATGAGAAGGAAGTATTTGATGTTAACGATGTTAATCTCCGGACCGAAGCAACCAGGATACGACATCAATGTCTCCCTAGCACCTTTGATTGGATCTCAAACTCATGTGGGAAGACGGTGTTCAGTGTTTTGATGCACGTTCAGAACAATTTTTTACCCTTAGGGCAGTTTTGTTGTGGACTATAAATGATTTTCCAGCGTACGGTAATCTATGTGGATGTACTGTGAAAGGTTATAAGGCGTGTCCAATATGTGGGGAGGAAAATCTTCCATCAGATTGTCACAGGGAAAAAAAAAAAATGCATACATGGGACATAGAAAATTCTTACCCAGACATCAACCTTATAGAAGACAAAAAAAGGCTTTGATGGTAAGCAAGAGCACGGGATACCACCTCCCCTTTATCAGGGAGACAATCTACAACAGACTATGGATGACCTTCCCATGGGAAGAGGTCAACTAGGGTTGAATGACGAATGTCGAATGACTATTGGAAGAGGATTTTCTGCATTCTTGAACTACCATACTGGAAGAAACTGCATGTGCGTCATTGTCTTGATATATGCACATTGAGAAGAATGGTTGATGAATATAATAGGTACACTACTTGACATACAGGGAAGAGTAAGGATGGGTTGAGTACTCGACTTGATTTAGTGGAGTGAACATTCGGCCCGAATTAGCTCCCGTTACCACACAAGTAAACTTACATACCAGCAACATGTTATACGTTTGTCAAAGTCGGAGAAGATGTCCATTGTAGGACTTTGTCGGACCTTAAGGTTCCTGAAGGATACTCATCGAATTTTAGAAGTCTGGTATCTTTAGAGAATCTAACACTCTCGGCCTTAAATCACATGATTGTCATATTCTAATGCAACAACTTCTCCCAATTGCATTACGGGGAGTTCTTCCAAAAAGTGTCAGGGTTGCTATCATTAGATTATTTCTTTTTTCAACGCTATTTTGCTCCAAGACTCTACGAATACCGATCTAGATAAACTGCAGTTGATGTTGTCAAACTCTATGTATGCTTGAAAAGTATTTTCCACCGTCATTTTTCACCATTATGGTACATCTGTGTATCCACCTCGTGCGGGAGGCGAAGCTATGTGGACCCGTTTACGTGCGGTGGATGTACCCATTTGAAAGGTATATGAAAGTGTTGAAAAGGCAATGTACGTAACAGAAATCGCCCTGAAGGTTCAATTGCAGAAGCACACATTTCTGAGGAGGCAGTTCAATTTGTTCTGACTTTGTATCTACGATAGACCCCATTGGATTAGGGTCATTTCAAACCCGAGAAGAATCGGATCGACAGACCATTGTCTGCACGATCATTGGTTAGACCTGCTCCATCTTTACTAAAACAAGTCCATTTGCACATACTAGAAAAATACGGAAGAAGTGCAGCCGTATAGAGAGTAAGCTCGCGGGCACTGACATGTCCTTTTTTTTTTTTTACTTGAATTTTTTTTTGTTGTTTTAAATGCCCTTTTTTTTACCTTATGCAGGTAACATATGGAACTCTTGAAACATCTTCCAATCCTAGAAAGGCGAAGAAGGGGAAAAGGTTGGTAGAAGAGCTAACTGATCATTTCCCAGTTGGATACGTGACAAGGTATTCCCCTCCCGTACAATTGTTCTTATTGTCTCTATATTTCAACATCAAACATTTATGTCTAACTTGTGTGCCCACGAAAGGTGATACTTGAAACACAGGAAGGAAAAGTCATTTCGACGACTCTAAGATGGATTGCACATGGCCCACATCCGATTGTGACGACATACGATGGATATAGGGTTAACGACATTTCCTACAACACAAAGTTTCGCGATGACTGTAGAACGGTTCAGAACAGCGGTTATGTTCGTTGCCACAACAATGCAGATGGCTAG
mRNA sequence
ATGTATATGCGGAAGCGACTCAGTGCCTATGACCGTCAAGTGTCCCTCCTGCCTCTCGTCGGTCTGCCGCCCGTCCTACCTCTGCTTGAAAGAATGAAACATGAAAGGGTAACATATGGAACTCTTGAAACATCTTCCAATCCTAGAAAGGCGAAGAAGGGGAAAAGGTTGGTAGAAGAGCTAACTGATCATTTCCCAGTTGGATACGTGACAAGGTATTCCCCTCCCGTGATACTTGAAACACAGGAAGGAAAAGTCATTTCGACGACTCTAAGATGGATTGCACATGGCCCACATCCGATTGTGACGACATACGATGGATATAGGGTTAACGACATTTCCTACAACACAAAGTTTCGCGATGACTGTAGAACGGTTCAGAACAGCGGTTATGTTCGTTGCCACAACAATGCAGATGGCTAG
Coding sequence (CDS)
ATGTATATGCGGAAGCGACTCAGTGCCTATGACCGTCAAGTGTCCCTCCTGCCTCTCGTCGGTCTGCCGCCCGTCCTACCTCTGCTTGAAAGAATGAAACATGAAAGGGTAACATATGGAACTCTTGAAACATCTTCCAATCCTAGAAAGGCGAAGAAGGGGAAAAGGTTGGTAGAAGAGCTAACTGATCATTTCCCAGTTGGATACGTGACAAGGTATTCCCCTCCCGTGATACTTGAAACACAGGAAGGAAAAGTCATTTCGACGACTCTAAGATGGATTGCACATGGCCCACATCCGATTGTGACGACATACGATGGATATAGGGTTAACGACATTTCCTACAACACAAAGTTTCGCGATGACTGTAGAACGGTTCAGAACAGCGGTTATGTTCGTTGCCACAACAATGCAGATGGCTAG
Protein sequence
MYMRKRLSAYDRQVSLLPLVGLPPVLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEGKVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSGYVRCHNNADG
Homology
BLAST of PI0016892 vs. ExPASy TrEMBL
Match:
A0A5A7T3F8 (Transposase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001930 PE=4 SV=1)
HSP 1 Score: 104.4 bits (259), Expect = 4.0e-19
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 0
Query: 25 VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
+L +E + R + + SSNPR+A+ K L++E FP V+ E QEG
Sbjct: 717 ILENIEEVHPYRERHMKILKSSNPRRARNEKWLLDEHNRSFP----NWIRDEVMREIQEG 776
Query: 85 KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
+V+STT+RWIAHGPHP+V Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 777 QVVSTTIRWIAHGPHPVVMIYEGYKVNGICYNTKHRDDTRTVQNSG 818
BLAST of PI0016892 vs. ExPASy TrEMBL
Match:
A0A5A7SKM9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G005120 PE=4 SV=1)
HSP 1 Score: 102.1 bits (253), Expect = 2.0e-18
Identity = 53/106 (50.00%), Postives = 68/106 (64.15%), Query Frame = 0
Query: 25 VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
+L +E + R + + SSNPR+A+ K L +E FP V+ E QEG
Sbjct: 891 ILENIEEVHPYRERHMEILKSSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEG 950
Query: 85 KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
+V+STT+RWIAHGPHP+V Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 951 QVVSTTIRWIAHGPHPVVMIYEGYKVNGICYNTKRRDDTRTVQNSG 992
BLAST of PI0016892 vs. ExPASy TrEMBL
Match:
A0A5A7USJ8 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00320 PE=4 SV=1)
HSP 1 Score: 101.3 bits (251), Expect = 3.4e-18
Identity = 54/106 (50.94%), Postives = 67/106 (63.21%), Query Frame = 0
Query: 25 VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
+L +E + R + + SSNPR+A+ K L +E FP V+ E QEG
Sbjct: 888 ILENIEEVHPYRERHMEILKSSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEG 947
Query: 85 KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
+V+STT+RWIAHGPHPIV Y GY+VN I YNTK RDD RTVQNSG
Sbjct: 948 QVVSTTIRWIAHGPHPIVMIYKGYKVNGICYNTKRRDDTRTVQNSG 989
BLAST of PI0016892 vs. ExPASy TrEMBL
Match:
A0A5A7UXS1 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3037G00020 PE=4 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 5.8e-18
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0
Query: 45 SSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEGKVISTTLRWIAHGPHPIVTT 104
SSNPR+A+ K L +E FP V+ E QEG+V+STT+RWIAHGPHP+V
Sbjct: 4 SSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEGQVVSTTIRWIAHGPHPVVMI 63
Query: 105 YDGYRVNDISYNTKFRDDCRTVQNSG 131
Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 64 YEGYKVNGICYNTKRRDDTRTVQNSG 85
BLAST of PI0016892 vs. ExPASy TrEMBL
Match:
A0A5A7V975 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G00360 PE=3 SV=1)
HSP 1 Score: 99.8 bits (247), Expect = 9.9e-18
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0
Query: 45 SSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEGKVISTTLRWIAHGPHPIVTT 104
SSNPR+A+ K L +E FP V+ E QEG+V+STT+RWIAHGPHP+V
Sbjct: 6 SSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEGQVMSTTIRWIAHGPHPVVMI 65
Query: 105 YDGYRVNDISYNTKFRDDCRTVQNSG 131
Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 66 YEGYKVNGICYNTKRRDDTRTVQNSG 87
BLAST of PI0016892 vs. NCBI nr
Match:
KAA0038004.1 (transposase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 104.4 bits (259), Expect = 8.3e-19
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 0
Query: 25 VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
+L +E + R + + SSNPR+A+ K L++E FP V+ E QEG
Sbjct: 717 ILENIEEVHPYRERHMKILKSSNPRRARNEKWLLDEHNRSFP----NWIRDEVMREIQEG 776
Query: 85 KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
+V+STT+RWIAHGPHP+V Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 777 QVVSTTIRWIAHGPHPVVMIYEGYKVNGICYNTKHRDDTRTVQNSG 818
BLAST of PI0016892 vs. NCBI nr
Match:
KAA0031724.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 102.1 bits (253), Expect = 4.1e-18
Identity = 53/106 (50.00%), Postives = 68/106 (64.15%), Query Frame = 0
Query: 25 VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
+L +E + R + + SSNPR+A+ K L +E FP V+ E QEG
Sbjct: 891 ILENIEEVHPYRERHMEILKSSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEG 950
Query: 85 KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
+V+STT+RWIAHGPHP+V Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 951 QVVSTTIRWIAHGPHPVVMIYEGYKVNGICYNTKRRDDTRTVQNSG 992
BLAST of PI0016892 vs. NCBI nr
Match:
KAA0057657.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 101.3 bits (251), Expect = 7.0e-18
Identity = 54/106 (50.94%), Postives = 67/106 (63.21%), Query Frame = 0
Query: 25 VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
+L +E + R + + SSNPR+A+ K L +E FP V+ E QEG
Sbjct: 888 ILENIEEVHPYRERHMEILKSSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEG 947
Query: 85 KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
+V+STT+RWIAHGPHPIV Y GY+VN I YNTK RDD RTVQNSG
Sbjct: 948 QVVSTTIRWIAHGPHPIVMIYKGYKVNGICYNTKRRDDTRTVQNSG 989
BLAST of PI0016892 vs. NCBI nr
Match:
KAA0058986.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 100.5 bits (249), Expect = 1.2e-17
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0
Query: 45 SSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEGKVISTTLRWIAHGPHPIVTT 104
SSNPR+A+ K L +E FP V+ E QEG+V+STT+RWIAHGPHP+V
Sbjct: 4 SSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEGQVVSTTIRWIAHGPHPVVMI 63
Query: 105 YDGYRVNDISYNTKFRDDCRTVQNSG 131
Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 64 YEGYKVNGICYNTKRRDDTRTVQNSG 85
BLAST of PI0016892 vs. NCBI nr
Match:
KAA0042291.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 99.8 bits (247), Expect = 2.0e-17
Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 0
Query: 25 VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
+L +E + R + + SSNPR+A+ K L +E FP V+ E QEG
Sbjct: 311 ILENIEEVHPYRERHMEILKSSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEG 370
Query: 85 KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
+V+STT+RWIA+GPHP+V Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 371 QVVSTTIRWIAYGPHPVVMIYEGYKVNGICYNTKRRDDTRTVQNSG 412
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T3F8 | 4.0e-19 | 50.00 | Transposase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
A0A5A7SKM9 | 2.0e-18 | 50.00 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G005120 P... | [more] |
A0A5A7USJ8 | 3.4e-18 | 50.94 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00320 ... | [more] |
A0A5A7UXS1 | 5.8e-18 | 58.14 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3037G00020 P... | [more] |
A0A5A7V975 | 9.9e-18 | 58.14 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G00360 P... | [more] |
Match Name | E-value | Identity | Description | |