PI0016892 (gene) Melon (PI 482460) v1

Overview
NamePI0016892
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionTransposase-like protein
Locationchr03: 9124439 .. 9127062 (+)
RNA-Seq ExpressionPI0016892
SyntenyPI0016892
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATATGCGGAAGCGACTCAGTGCCTATGACCGTCAAGTGTCCCTCCTGCCTCTCGTCGGTCTGCCGCCCGTCCTACCTCTGCTTGAAAGAATGAAACATGAAAGGGTGAGTATAAACTTATACTCAGTAAAGGGGAAAAACTACTACTAAGAAGCTAGGGTTGGATAGGTATCTCCCTATGTCATCCCGGTGCCCGGCAGTCTAGGAAATCCCGTAGGAGTTTCCACATGAGTTTGGTGGCCCGTAGGTCGCACCCATATCAGTCTTGATCCCGTCAGATGCACTATAGTCCGGGGTTCCCGTCGGATACTTCCATCAGAGCTAGTGATCCCGTAGGATGCACCTATCAGTCTGGTGTTCCGTAGGAGACACCTTCAGGCAACTCAGGGATGTGTGACATAGCTAGAAATAGGTATCCCCAGAGTACATACAACAATCATGCAAGGCTGGAAAACACAATCACAGTCTGGGAATCACGTAGGAGTTCCACTCAGTCTGGTGGCCCGTTGGTCGCACCCATAAGTCATACATGAAACATGATACATATAAAACATAGTCATACTGAACATGGCATAATTTCATAACATGATGTACAGAGTTCAGAACCATAATTTACTGATTGGGGTTATCTGACGGAGGCATCAATCCATATGGAGATTTATCGACCAAGTATAGTTGTTGCCCTGTGATTGCTACAATATATAACCTTCCCCATGGCTGTGTATGAGAAGGAAGTATTTGATGTTAACGATGTTAATCTCCGGACCGAAGCAACCAGGATACGACATCAATGTCTCCCTAGCACCTTTGATTGGATCTCAAACTCATGTGGGAAGACGGTGTTCAGTGTTTTGATGCACGTTCAGAACAATTTTTTACCCTTAGGGCAGTTTTGTTGTGGACTATAAATGATTTTCCAGCGTACGGTAATCTATGTGGATGTACTGTGAAAGGTTATAAGGCGTGTCCAATATGTGGGGAGGAAAATCTTCCATCAGATTGTCACAGGGAAAAAAAAAAAATGCATACATGGGACATAGAAAATTCTTACCCAGACATCAACCTTATAGAAGACAAAAAAAGGCTTTGATGGTAAGCAAGAGCACGGGATACCACCTCCCCTTTATCAGGGAGACAATCTACAACAGACTATGGATGACCTTCCCATGGGAAGAGGTCAACTAGGGTTGAATGACGAATGTCGAATGACTATTGGAAGAGGATTTTCTGCATTCTTGAACTACCATACTGGAAGAAACTGCATGTGCGTCATTGTCTTGATATATGCACATTGAGAAGAATGGTTGATGAATATAATAGGTACACTACTTGACATACAGGGAAGAGTAAGGATGGGTTGAGTACTCGACTTGATTTAGTGGAGTGAACATTCGGCCCGAATTAGCTCCCGTTACCACACAAGTAAACTTACATACCAGCAACATGTTATACGTTTGTCAAAGTCGGAGAAGATGTCCATTGTAGGACTTTGTCGGACCTTAAGGTTCCTGAAGGATACTCATCGAATTTTAGAAGTCTGGTATCTTTAGAGAATCTAACACTCTCGGCCTTAAATCACATGATTGTCATATTCTAATGCAACAACTTCTCCCAATTGCATTACGGGGAGTTCTTCCAAAAAGTGTCAGGGTTGCTATCATTAGATTATTTCTTTTTTCAACGCTATTTTGCTCCAAGACTCTACGAATACCGATCTAGATAAACTGCAGTTGATGTTGTCAAACTCTATGTATGCTTGAAAAGTATTTTCCACCGTCATTTTTCACCATTATGGTACATCTGTGTATCCACCTCGTGCGGGAGGCGAAGCTATGTGGACCCGTTTACGTGCGGTGGATGTACCCATTTGAAAGGTATATGAAAGTGTTGAAAAGGCAATGTACGTAACAGAAATCGCCCTGAAGGTTCAATTGCAGAAGCACACATTTCTGAGGAGGCAGTTCAATTTGTTCTGACTTTGTATCTACGATAGACCCCATTGGATTAGGGTCATTTCAAACCCGAGAAGAATCGGATCGACAGACCATTGTCTGCACGATCATTGGTTAGACCTGCTCCATCTTTACTAAAACAAGTCCATTTGCACATACTAGAAAAATACGGAAGAAGTGCAGCCGTATAGAGAGTAAGCTCGCGGGCACTGACATGTCCTTTTTTTTTTTTTACTTGAATTTTTTTTTGTTGTTTTAAATGCCCTTTTTTTTACCTTATGCAGGTAACATATGGAACTCTTGAAACATCTTCCAATCCTAGAAAGGCGAAGAAGGGGAAAAGGTTGGTAGAAGAGCTAACTGATCATTTCCCAGTTGGATACGTGACAAGGTATTCCCCTCCCGTACAATTGTTCTTATTGTCTCTATATTTCAACATCAAACATTTATGTCTAACTTGTGTGCCCACGAAAGGTGATACTTGAAACACAGGAAGGAAAAGTCATTTCGACGACTCTAAGATGGATTGCACATGGCCCACATCCGATTGTGACGACATACGATGGATATAGGGTTAACGACATTTCCTACAACACAAAGTTTCGCGATGACTGTAGAACGGTTCAGAACAGCGGTTATGTTCGTTGCCACAACAATGCAGATGGCTAG

mRNA sequence

ATGTATATGCGGAAGCGACTCAGTGCCTATGACCGTCAAGTGTCCCTCCTGCCTCTCGTCGGTCTGCCGCCCGTCCTACCTCTGCTTGAAAGAATGAAACATGAAAGGGTAACATATGGAACTCTTGAAACATCTTCCAATCCTAGAAAGGCGAAGAAGGGGAAAAGGTTGGTAGAAGAGCTAACTGATCATTTCCCAGTTGGATACGTGACAAGGTATTCCCCTCCCGTGATACTTGAAACACAGGAAGGAAAAGTCATTTCGACGACTCTAAGATGGATTGCACATGGCCCACATCCGATTGTGACGACATACGATGGATATAGGGTTAACGACATTTCCTACAACACAAAGTTTCGCGATGACTGTAGAACGGTTCAGAACAGCGGTTATGTTCGTTGCCACAACAATGCAGATGGCTAG

Coding sequence (CDS)

ATGTATATGCGGAAGCGACTCAGTGCCTATGACCGTCAAGTGTCCCTCCTGCCTCTCGTCGGTCTGCCGCCCGTCCTACCTCTGCTTGAAAGAATGAAACATGAAAGGGTAACATATGGAACTCTTGAAACATCTTCCAATCCTAGAAAGGCGAAGAAGGGGAAAAGGTTGGTAGAAGAGCTAACTGATCATTTCCCAGTTGGATACGTGACAAGGTATTCCCCTCCCGTGATACTTGAAACACAGGAAGGAAAAGTCATTTCGACGACTCTAAGATGGATTGCACATGGCCCACATCCGATTGTGACGACATACGATGGATATAGGGTTAACGACATTTCCTACAACACAAAGTTTCGCGATGACTGTAGAACGGTTCAGAACAGCGGTTATGTTCGTTGCCACAACAATGCAGATGGCTAG

Protein sequence

MYMRKRLSAYDRQVSLLPLVGLPPVLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEGKVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSGYVRCHNNADG
Homology
[Close]
BLAST of PI0016892 vs. ExPASy TrEMBL
Match: A0A5A7T3F8 (Transposase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001930 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.0e-19
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 0 

Query: 25  VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
           +L  +E +   R  +  +  SSNPR+A+  K L++E    FP          V+ E QEG
Sbjct: 717 ILENIEEVHPYRERHMKILKSSNPRRARNEKWLLDEHNRSFP----NWIRDEVMREIQEG 776

Query: 85  KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
           +V+STT+RWIAHGPHP+V  Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 777 QVVSTTIRWIAHGPHPVVMIYEGYKVNGICYNTKHRDDTRTVQNSG 818

[Close]
BLAST of PI0016892 vs. ExPASy TrEMBL
Match: A0A5A7SKM9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G005120 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.0e-18
Identity = 53/106 (50.00%), Postives = 68/106 (64.15%), Query Frame = 0 

Query: 25  VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
           +L  +E +   R  +  +  SSNPR+A+  K L +E    FP          V+ E QEG
Sbjct: 891 ILENIEEVHPYRERHMEILKSSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEG 950

Query: 85  KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
           +V+STT+RWIAHGPHP+V  Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 951 QVVSTTIRWIAHGPHPVVMIYEGYKVNGICYNTKRRDDTRTVQNSG 992

[Close]
BLAST of PI0016892 vs. ExPASy TrEMBL
Match: A0A5A7USJ8 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00320 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.4e-18
Identity = 54/106 (50.94%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 25  VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
           +L  +E +   R  +  +  SSNPR+A+  K L +E    FP          V+ E QEG
Sbjct: 888 ILENIEEVHPYRERHMEILKSSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEG 947

Query: 85  KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
           +V+STT+RWIAHGPHPIV  Y GY+VN I YNTK RDD RTVQNSG
Sbjct: 948 QVVSTTIRWIAHGPHPIVMIYKGYKVNGICYNTKRRDDTRTVQNSG 989

[Close]
BLAST of PI0016892 vs. ExPASy TrEMBL
Match: A0A5A7UXS1 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3037G00020 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.8e-18
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 45  SSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEGKVISTTLRWIAHGPHPIVTT 104
           SSNPR+A+  K L +E    FP          V+ E QEG+V+STT+RWIAHGPHP+V  
Sbjct: 4   SSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEGQVVSTTIRWIAHGPHPVVMI 63

Query: 105 YDGYRVNDISYNTKFRDDCRTVQNSG 131
           Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 64  YEGYKVNGICYNTKRRDDTRTVQNSG 85

[Close]
BLAST of PI0016892 vs. ExPASy TrEMBL
Match: A0A5A7V975 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G00360 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 9.9e-18
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 45  SSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEGKVISTTLRWIAHGPHPIVTT 104
           SSNPR+A+  K L +E    FP          V+ E QEG+V+STT+RWIAHGPHP+V  
Sbjct: 6   SSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEGQVMSTTIRWIAHGPHPVVMI 65

Query: 105 YDGYRVNDISYNTKFRDDCRTVQNSG 131
           Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 66  YEGYKVNGICYNTKRRDDTRTVQNSG 87

[Close]
BLAST of PI0016892 vs. NCBI nr
Match: KAA0038004.1 (transposase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 104.4 bits (259), Expect = 8.3e-19
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 0 

Query: 25  VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
           +L  +E +   R  +  +  SSNPR+A+  K L++E    FP          V+ E QEG
Sbjct: 717 ILENIEEVHPYRERHMKILKSSNPRRARNEKWLLDEHNRSFP----NWIRDEVMREIQEG 776

Query: 85  KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
           +V+STT+RWIAHGPHP+V  Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 777 QVVSTTIRWIAHGPHPVVMIYEGYKVNGICYNTKHRDDTRTVQNSG 818

[Close]
BLAST of PI0016892 vs. NCBI nr
Match: KAA0031724.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 4.1e-18
Identity = 53/106 (50.00%), Postives = 68/106 (64.15%), Query Frame = 0 

Query: 25  VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
           +L  +E +   R  +  +  SSNPR+A+  K L +E    FP          V+ E QEG
Sbjct: 891 ILENIEEVHPYRERHMEILKSSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEG 950

Query: 85  KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
           +V+STT+RWIAHGPHP+V  Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 951 QVVSTTIRWIAHGPHPVVMIYEGYKVNGICYNTKRRDDTRTVQNSG 992

[Close]
BLAST of PI0016892 vs. NCBI nr
Match: KAA0057657.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 101.3 bits (251), Expect = 7.0e-18
Identity = 54/106 (50.94%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 25  VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
           +L  +E +   R  +  +  SSNPR+A+  K L +E    FP          V+ E QEG
Sbjct: 888 ILENIEEVHPYRERHMEILKSSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEG 947

Query: 85  KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
           +V+STT+RWIAHGPHPIV  Y GY+VN I YNTK RDD RTVQNSG
Sbjct: 948 QVVSTTIRWIAHGPHPIVMIYKGYKVNGICYNTKRRDDTRTVQNSG 989

[Close]
BLAST of PI0016892 vs. NCBI nr
Match: KAA0058986.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-17
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = 0 

Query: 45  SSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEGKVISTTLRWIAHGPHPIVTT 104
           SSNPR+A+  K L +E    FP          V+ E QEG+V+STT+RWIAHGPHP+V  
Sbjct: 4   SSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEGQVVSTTIRWIAHGPHPVVMI 63

Query: 105 YDGYRVNDISYNTKFRDDCRTVQNSG 131
           Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 64  YEGYKVNGICYNTKRRDDTRTVQNSG 85

[Close]
BLAST of PI0016892 vs. NCBI nr
Match: KAA0042291.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-17
Identity = 52/106 (49.06%), Postives = 68/106 (64.15%), Query Frame = 0 

Query: 25  VLPLLERMKHERVTYGTLETSSNPRKAKKGKRLVEELTDHFPVGYVTRYSPPVILETQEG 84
           +L  +E +   R  +  +  SSNPR+A+  K L +E    FP          V+ E QEG
Sbjct: 311 ILENIEEVHPYRERHMEILKSSNPRRARNEKWLRDEHNRSFP----NWIRDEVMREIQEG 370

Query: 85  KVISTTLRWIAHGPHPIVTTYDGYRVNDISYNTKFRDDCRTVQNSG 131
           +V+STT+RWIA+GPHP+V  Y+GY+VN I YNTK RDD RTVQNSG
Sbjct: 371 QVVSTTIRWIAYGPHPVVMIYEGYKVNGICYNTKRRDDTRTVQNSG 412

The following BLAST results are available for this feature:
BLAST of PI0016892 vs.
Match NameE-valueIdentityDescription
BLAST of PI0016892 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T3F84.0e-1950.00Transposase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A5A7SKM92.0e-1850.00Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G005120 P... [more]
A0A5A7USJ83.4e-1850.94Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00320 ... [more]
A0A5A7UXS15.8e-1858.14Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3037G00020 P... [more]
A0A5A7V9759.9e-1858.14Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G00360 P... [more]
BLAST of PI0016892 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0038004.18.3e-1950.00transposase-like protein [Cucumis melo var. makuwa][more]
KAA0031724.14.1e-1850.00transposase [Cucumis melo var. makuwa][more]
KAA0057657.17.0e-1850.94transposase [Cucumis melo var. makuwa][more]
KAA0058986.11.2e-1758.14transposase [Cucumis melo var. makuwa][more]
KAA0042291.12.0e-1749.06transposase [Cucumis melo var. makuwa][more]
BLAST of PI0016892 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0016892.1PI0016892.1mRNA