PI0016558 (gene) Melon (PI 482460) v1

Overview


Name	PI0016558
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Epidermal patterning factor-like protein
Location	chr01: 2788262 .. 2789303 (+)
RNA-Seq Expression	PI0016558
Synteny	PI0016558

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCTCTCTCTAAAAAAACTAATTTTACCTCTTAATTTCTTCAACTTCTACTCTCAAATATCATGAAGCCTTTCACTTGCTTTTCTATTCTCTTCATTGCTTTCTTATTATTCTCAACACCCATTTCCTCTAGACGCATTTCTCAACAAAACTCACGTAATTCACTCTCTTTTACCCTTTCTTCTTTCTTTCCTTTTTACTGTGATGAAAAAAGTGTAAACGACAAACAAAGAAAGTATAAACAGTAGGCAAAAATTTACGTAGTTGACTAACTATATGCATGTTAACTACATCCGTGAGCAGTTTTATATACTGAGGTTCTAATAGGATGAGTTAGTTTATATATGACACTCTTTTAAACCCCTTATGCCTAAAAATCGTAATTATGTAGTTTTGTTATATGTTTTAGATAAGTATTTTTGAAACATATCATTTAATTTTTATGTGTAGGTCATGGGCATCACCGCAAGGGGGCGGCATCCTCTGGTAAAGCAGCAATGGTGGTGAAAGAGAAGGCGGCGATGATGACGATGGGGAGAAAAGGGGCGGAGACAGTTGAAATAGCAGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGCTCACCTTGCAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCCTATCCTGTTCCTTAATCCAAACCCCTTCTTTAATTAATTTCGTTTGAACAATTTTACAGGGCGGTTGGATGTATAAGGAAGAAATTAAAAGTTATAGTTTTATTTTATTGTATATCCAATGATTTAGAGAGTACTAACTACAGTGTGACCGTCACATTGTATGTACAAATATATCGATCAAGTGTAGTTTTTTAGTAACATTTCTTGTTTCTTTTTATTGTTAATTCTTTTAGTTTTTTTCTTTCTTGATTTTTCCTTTTTTTGCAAGTTAATTAGAGAGTTGTAATCAAAGAGTGCTTTTTAGTAACATTTTGACAACTTAGACATATTTATA

mRNA sequence

TTCCCTCTCTCTAAAAAAACTAATTTTACCTCTTAATTTCTTCAACTTCTACTCTCAAATATCATGAAGCCTTTCACTTGCTTTTCTATTCTCTTCATTGCTTTCTTATTATTCTCAACACCCATTTCCTCTAGACGCATTTCTCAACAAAACTCACGTCATGGGCATCACCGCAAGGGGGCGGCATCCTCTGGTAAAGCAGCAATGGTGGTGAAAGAGAAGGCGGCGATGATGACGATGGGGAGAAAAGGGGCGGAGACAGTTGAAATAGCAGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGCTCACCTTGCAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCCTATCCTGTTCCTTAATCCAAACCCCTTCTTTAATTAATTTCGTTTGAACAATTTTACAGGGCGGTTGGATGTATAAGGAAGAAATTAAAAGTTATAGTTTTATTTTATTGTATATCCAATGATTTAGAGAGTACTAACTACAGTGTGACCGTCACATTGTATGTACAAATATATCGATCAAGTGTAGTTTTTTAGTAACATTTCTTGTTTCTTTTTATTGTTAATTCTTTTAGTTTTTTTCTTTCTTGATTTTTCCTTTTTTTGCAAGTTAATTAGAGAGTTGTAATCAAAGAGTGCTTTTTAGTAACATTTTGACAACTTAGACATATTTATA

Coding sequence (CDS)

ATGAAGCCTTTCACTTGCTTTTCTATTCTCTTCATTGCTTTCTTATTATTCTCAACACCCATTTCCTCTAGACGCATTTCTCAACAAAACTCACGTCATGGGCATCACCGCAAGGGGGCGGCATCCTCTGGTAAAGCAGCAATGGTGGTGAAAGAGAAGGCGGCGATGATGACGATGGGGAGAAAAGGGGCGGAGACAGTTGAAATAGCAGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGCTCACCTTGCAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCCTATCCTGTTCCTTAA

Protein sequence

MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVKEKAAMMTMGRKGAETVEIAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

Homology

[Close]

BLAST of PI0016558 vs. ExPASy Swiss-Prot
Match: Q8S8I4 (Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.1e-25
Identity = 62/116 (53.45%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 8   SILFIAFLL--FSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVKEKAAMMTMGRKGAE 67
           S+L +AF L  F   + +R +   +S   HH  G   + K               R+  +
Sbjct: 3   SLLLLAFFLSFFFGSLLARHL-PTSSHPSHHHVGMTGALKRQ-------------RRRPD 62

Query: 68  TVEIAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 122
           TV++AGS LPDCSHACGSCSPCRLVM+SFVCAS++EAETCPMAY+CMCNNKSYPVP
Sbjct: 63  TVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPVP 104

[Close]

BLAST of PI0016558 vs. ExPASy Swiss-Prot
Match: C4B8C5 (EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EPFL7 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.4e-11
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 70  AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 122
           +GSS+PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Sbjct: 121 SGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of PI0016558 vs. ExPASy Swiss-Prot
Match: Q8LC53 (Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.2e-10
Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 6   CFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVKEKAAMMTMGRKGAE 65
           C  ++F A  L    I  R    +N+ +G  +K A          KE      + + G  
Sbjct: 11  CLVLVFAACSLVVNSI--RTPPLKNTVNGGEKKNADIEQAQTHHKKE------ISKNGGV 70

Query: 66  TVEI--AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 122
            +E+   GSSLPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Sbjct: 71  EMEMYPTGSSLPDCSYACGACSPCKRVMISFECS---VAESCSVIYRCTCRGRYYHVP 117

[Close]

BLAST of PI0016558 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.0e-04
Identity = 43/125 (34.40%), Postives = 58/125 (46.40%), Query Frame = 0


Query: 4   FTCFSILFIAFLL------FSTPISSRRISQQNSRHGH-HRKGAASSGKAAMVVKEKAAM 63
           F+ F +L + F+L        TP S+     +NS  G      A   GK+ +V+K K   
Sbjct: 31  FSLFYLLLLFFVLCVIATFTITPTSTSSPYNRNSNSGTLGNFYAKEEGKSTVVIK-KTRK 90

Query: 64  MTMGRKGAETVEI---AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMC 119
           +    K AE   I    GSS P CS  CG C+PC+ V +     +   AE  P A+RC C
Sbjct: 91  IGDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKC 150

[Close]

BLAST of PI0016558 vs. ExPASy TrEMBL
Match: A0A0A0K5P8 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047370 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.5e-56
Identity = 119/124 (95.97%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAA-SSGKAAM-VVKEKAAMMT 60
           MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAA SSGKAAM VVKEKAAMMT
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60

Query: 61  -MGRKGAETVEIAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
            MGRKG ETVE+AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 122
           YPVP
Sbjct: 121 YPVP 124

[Close]

BLAST of PI0016558 vs. ExPASy TrEMBL
Match: A0A1S3C0N9 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 7.9e-56
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSGKAAM-VVKEKAAMMTM 60
           MKPFTCFSI+FI FLL STPISSRRISQQNSRHGHHRKGAASSGKAAM VV EK  MMTM
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMMTM 60

Query: 61  GRKGAETVEIAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 120
           GRKG ETVE+AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP
Sbjct: 61  GRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 120

Query: 121 VP 122
           VP
Sbjct: 121 VP 122

[Close]

BLAST of PI0016558 vs. ExPASy TrEMBL
Match: A0A6J1ESJ9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437184 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.2e-42
Identity = 93/129 (72.09%), Postives = 100/129 (77.52%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGA--------ASSGKAAMVVKE 60
           MK   CFS++FIAFLLF  PISSRRISQ NSR GHH K A        A+ GK+   V +
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKGKSYWPVTK 60

Query: 61  KAAMMTMGRKGAETVEIAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCM 120
             A   MGRKG ETVE+AGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCM
Sbjct: 61  AVAAAVMGRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCM 120

Query: 121 CNNKSYPVP 122
           CNNKSYPVP
Sbjct: 121 CNNKSYPVP 129

[Close]

BLAST of PI0016558 vs. ExPASy TrEMBL
Match: A0A6J1JEL1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486204 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.9e-42
Identity = 89/121 (73.55%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVKEKAAMMTMG 60
           MK   CFS++FIAFLLF  PISSRRISQ NSR GHH K A  S +A    K+ +    + 
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKQNSYWPALW 60

Query: 61  RKGAETVEIAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPV 120
           RKG ETVE+AGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCMCNNKSYPV
Sbjct: 61  RKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCMCNNKSYPV 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of PI0016558 vs. ExPASy TrEMBL
Match: A0A5A7SMZ1 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003530 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.8e-39
Identity = 84/90 (93.33%), Postives = 85/90 (94.44%), Query Frame = 0


Query: 33  HGHHRKGAASSGKAAM-VVKEKAAMMTMGRKGAETVEIAGSSLPDCSHACGSCSPCRLVM 92
           HGHHRKGAASSGKAAM VV EK  MMTMGRKG ETVE+AGSSLPDCSHACGSCSPCRLVM
Sbjct: 15  HGHHRKGAASSGKAAMVVVNEKVTMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVM 74

Query: 93  ISFVCASLQEAETCPMAYRCMCNNKSYPVP 122
           ISFVCASLQEAETCPMAYRCMCNNKSYPVP
Sbjct: 75  ISFVCASLQEAETCPMAYRCMCNNKSYPVP 104

[Close]

BLAST of PI0016558 vs. NCBI nr
Match: XP_004136818.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical protein Csa_020445 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 7.3e-56
Identity = 119/124 (95.97%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAA-SSGKAAM-VVKEKAAMMT 60
           MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAA SSGKAAM VVKEKAAMMT
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60

Query: 61  -MGRKGAETVEIAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
            MGRKG ETVE+AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 122
           YPVP
Sbjct: 121 YPVP 124

[Close]

BLAST of PI0016558 vs. NCBI nr
Match: XP_008455333.1 (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo])

HSP 1 Score: 226.1 bits (575), Expect = 1.6e-55
Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSGKAAM-VVKEKAAMMTM 60
           MKPFTCFSI+FI FLL STPISSRRISQQNSRHGHHRKGAASSGKAAM VV EK  MMTM
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMMTM 60

Query: 61  GRKGAETVEIAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 120
           GRKG ETVE+AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP
Sbjct: 61  GRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 120

Query: 121 VP 122
           VP
Sbjct: 121 VP 122

[Close]

BLAST of PI0016558 vs. NCBI nr
Match: XP_038888568.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida])

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43
Identity = 94/121 (77.69%), Postives = 103/121 (85.12%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVKEKAAMMTMG 60
           M P T FSILFIAF LF TPISSR ISQ+NS HGHHRK A ++ K  +   EK A+  +G
Sbjct: 1   MNPSTWFSILFIAFFLFPTPISSRHISQRNSHHGHHRKMATTTVKEKLYSPEKKAV--IG 60

Query: 61  RKGAETVEIAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPV 120
           RKGA+TVE+AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP+
Sbjct: 61  RKGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPI 119

Query: 121 P 122
           P
Sbjct: 121 P 119

[Close]

BLAST of PI0016558 vs. NCBI nr
Match: XP_022930814.1 (uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 uncharacterized protein LOC111793854 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.4 bits (459), Expect = 4.6e-42
Identity = 93/129 (72.09%), Postives = 100/129 (77.52%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGA--------ASSGKAAMVVKE 60
           MK   CFS++FIAFLLF  PISSRRISQ NSR GHH K A        A+ GK+   V +
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKGKSYWPVTK 60

Query: 61  KAAMMTMGRKGAETVEIAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCM 120
             A   MGRKG ETVE+AGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCM
Sbjct: 61  AVAAAVMGRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCM 120

Query: 121 CNNKSYPVP 122
           CNNKSYPVP
Sbjct: 121 CNNKSYPVP 129

[Close]

BLAST of PI0016558 vs. NCBI nr
Match: XP_022989012.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 6.0e-42
Identity = 89/121 (73.55%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVKEKAAMMTMG 60
           MK   CFS++FIAFLLF  PISSRRISQ NSR GHH K A  S +A    K+ +    + 
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKQNSYWPALW 60

Query: 61  RKGAETVEIAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPV 120
           RKG ETVE+AGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCMCNNKSYPV
Sbjct: 61  RKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCMCNNKSYPV 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of PI0016558 vs. TAIR 10
Match: AT2G20875.1 (epidermal patterning factor 1 )

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-26
Identity = 62/116 (53.45%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 8   SILFIAFLL--FSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVKEKAAMMTMGRKGAE 67
           S+L +AF L  F   + +R +   +S   HH  G   + K               R+  +
Sbjct: 3   SLLLLAFFLSFFFGSLLARHL-PTSSHPSHHHVGMTGALKRQ-------------RRRPD 62

Query: 68  TVEIAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 122
           TV++AGS LPDCSHACGSCSPCRLVM+SFVCAS++EAETCPMAY+CMCNNKSYPVP
Sbjct: 63  TVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPVP 104

[Close]

BLAST of PI0016558 vs. TAIR 10
Match: AT1G71866.1 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Putative membrane lipoprotein (TAIR:AT1G34245.1). )

HSP 1 Score: 68.2 bits (165), Expect = 5.3e-12
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 70  AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 122
           +GSS+PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Sbjct: 121 SGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of PI0016558 vs. TAIR 10
Match: AT1G34245.1 (Putative membrane lipoprotein )

HSP 1 Score: 64.7 bits (156), Expect = 5.9e-11
Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 6   CFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVKEKAAMMTMGRKGAE 65
           C  ++F A  L    I  R    +N+ +G  +K A          KE      + + G  
Sbjct: 11  CLVLVFAACSLVVNSI--RTPPLKNTVNGGEKKNADIEQAQTHHKKE------ISKNGGV 70

Query: 66  TVEI--AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 122
            +E+   GSSLPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Sbjct: 71  EMEMYPTGSSLPDCSYACGACSPCKRVMISFECS---VAESCSVIYRCTCRGRYYHVP 117

[Close]

BLAST of PI0016558 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 46.2 bits (108), Expect = 2.2e-05
Identity = 43/125 (34.40%), Postives = 58/125 (46.40%), Query Frame = 0


Query: 4   FTCFSILFIAFLL------FSTPISSRRISQQNSRHGH-HRKGAASSGKAAMVVKEKAAM 63
           F+ F +L + F+L        TP S+     +NS  G      A   GK+ +V+K K   
Sbjct: 31  FSLFYLLLLFFVLCVIATFTITPTSTSSPYNRNSNSGTLGNFYAKEEGKSTVVIK-KTRK 90

Query: 64  MTMGRKGAETVEI---AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMC 119
           +    K AE   I    GSS P CS  CG C+PC+ V +     +   AE  P A+RC C
Sbjct: 91  IGDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKC 150

[Close]

BLAST of PI0016558 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 45.8 bits (107), Expect = 2.8e-05
Identity = 31/78 (39.74%), Postives = 40/78 (51.28%), Query Frame = 0


Query: 44  GKAAMVVKEKAAMMTMGRKGAETVEI---AGSSLPDCSHACGSCSPCRLVMISFVCASLQ 103
           GK+ +V+K K   +    K AE   I    GSS P CS  CG C+PC+ V +     +  
Sbjct: 152 GKSTVVIK-KTRKIGDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPV 211

Query: 104 EAETCPMAYRCMCNNKSY 119
            AE  P A+RC C NK Y
Sbjct: 212 TAEYYPEAWRCKCGNKLY 228

The following BLAST results are available for this feature:

BLAST of PI0016558 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8I4	4.1e-25	53.45	Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE...	[more]
C4B8C5	7.4e-11	53.85	EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q8LC53	8.2e-10	38.14	Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE...	[more]
Q1PEY6	3.0e-04	34.40	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of PI0016558 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5P8	3.5e-56	95.97	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047...	[more]
A0A1S3C0N9	7.9e-56	92.62	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522...	[more]
A0A6J1ESJ9	2.2e-42	72.09	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JEL1	2.9e-42	73.55	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A5A7SMZ1	1.8e-39	93.33	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of PI0016558 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136818.1	7.3e-56	95.97	protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical...	[more]
XP_008455333.1	1.6e-55	92.62	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]	[more]
XP_038888568.1	1.1e-43	77.69	protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida]	[more]
XP_022930814.1	4.6e-42	72.09	uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 unchar...	[more]
XP_022989012.1	6.0e-42	73.55	protein EPIDERMAL PATTERNING FACTOR 1 [Cucurbita maxima]	[more]

BLAST of PI0016558 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20875.1	2.9e-26	53.45	epidermal patterning factor 1	[more]
AT1G71866.1	5.3e-12	53.85	LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Put...	[more]
AT1G34245.1	5.9e-11	38.14	Putative membrane lipoprotein	[more]
AT2G30370.2	2.2e-05	34.40	allergen-related	[more]
AT2G30370.1	2.8e-05	39.74	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 70..119 e-value: 3.6E-15 score: 55.7
None	No IPR available	PANTHER	PTHR33109:SF41	PROTEIN EPIDERMAL PATTERNING FACTOR 1	coord: 5..121
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 5..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0016558.1	PI0016558.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region