PI0015564 (gene) Melon (PI 482460) v1

Overview


Name	PI0015564
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein Ycf2-like
Location	chr02: 10725624 .. 10726355 (-)
RNA-Seq Expression	PI0015564
Synteny	PI0015564

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTAGAAAAGTGAAGGAAGATTTGGCTTCTTTTAAGGATGAAGTGTTGAAAATGCTTAAGTCAATCATGGACAGTATCAATGAAAAATTGACTACAAGAAACCCTACCAAGCAATCTCAAGACTCTATTTATCAAAATAATGCTCCAACAAATAGTCTTCAAAACATTGAAGATGAAATGAACATTCAACGCTTGGATGATAAAGAGGTAACTATATCTTTTATCATATGATTGCTTATTGATTTCTATTCACATTAACTGATTACTATCTTTTAGTAATGATTAATTTTCTTAGCTTTCTAAAGAAGAAAAAGAAAAGGATTGATGAAGTACATAAGGTAATTTTATAAACTAGATTCTGTTTTTAATCTAGGTGATTACCATTTGATGTCCATCTTATTGACATTTGATTACTTGTTTTAGGTCCCTGAACAAGAAGAAAAAGATAAAGAAGTTGAAGGAAAAGATCAGCAAAATGCTGATGGATGTACAGTTGATGAAATACTCCAAATTAGCAAGGTGATTTTCAGTAATTAGTTCTGATTTTAATCTAAGTGATTACCATCTGATGTCCATCTTATTTTCATCTGATTGCATTTGATTTATTTTTGATTAATTTTTTTTCTAATCTCCTTAATTTGTATATAATAGTTTGTTGAAGAACTTCAACAAAAAAGAAATCAAGAAGATAAAGTAGTAGAAAAACAATCCATTATACGTACCTAA

mRNA sequence

ATGGAGGTTAGAAAAGTGAAGGAAGATTTGGCTTCTTTTAAGGATGAAGTGTTGAAAATGCTTAAGTCAATCATGGACAGTATCAATGAAAAATTGACTACAAGAAACCCTACCAAGCAATCTCAAGACTCTATTTATCAAAATAATGCTCCAACAAATAGTCTTCAAAACATTGAAGATGAAATGAACATTCAACGCTTGGATGATAAAGAGGTCCCTGAACAAGAAGAAAAAGATAAAGAAGTTGAAGGAAAAGATCAGCAAAATGCTGATGGATGTACAGTTGATGAAATACTCCAAATTAGCAAGTTTGTTGAAGAACTTCAACAAAAAAGAAATCAAGAAGATAAAGTAGTAGAAAAACAATCCATTATACGTACCTAA

Coding sequence (CDS)

ATGGAGGTTAGAAAAGTGAAGGAAGATTTGGCTTCTTTTAAGGATGAAGTGTTGAAAATGCTTAAGTCAATCATGGACAGTATCAATGAAAAATTGACTACAAGAAACCCTACCAAGCAATCTCAAGACTCTATTTATCAAAATAATGCTCCAACAAATAGTCTTCAAAACATTGAAGATGAAATGAACATTCAACGCTTGGATGATAAAGAGGTCCCTGAACAAGAAGAAAAAGATAAAGAAGTTGAAGGAAAAGATCAGCAAAATGCTGATGGATGTACAGTTGATGAAATACTCCAAATTAGCAAGTTTGTTGAAGAACTTCAACAAAAAAGAAATCAAGAAGATAAAGTAGTAGAAAAACAATCCATTATACGTACCTAA

Protein sequence

MEVRKVKEDLASFKDEVLKMLKSIMDSINEKLTTRNPTKQSQDSIYQNNAPTNSLQNIEDEMNIQRLDDKEVPEQEEKDKEVEGKDQQNADGCTVDEILQISKFVEELQQKRNQEDKVVEKQSIIRT

Homology

[Close]

BLAST of PI0015564 vs. ExPASy TrEMBL
Match: A0A5D3CVR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00300 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.7e-06
Identity = 48/131 (36.64%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 2   EVRKVKEDLASFK-------DEVLKMLKSIMDSINEKLTTRNPTKQSQDSIYQNNAPTNS 61
           E+++VK+DL S K       +EVL++L +I+  INE++ T    KQSQ S ++N+APT S
Sbjct: 158 EIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTE---KQSQGSYHENHAPTLS 217

Query: 62  LQNIEDEMNIQRLDDKEVPEQE-EKDKEVEGKDQQNADGCTVDEILQISKFVEELQQKRN 121
           LQ +E+ MNI  LDD E+ E+E E+++  E  +Q          I  I KF+   Q+   
Sbjct: 218 LQRLEERMNIHNLDDAEINEEEIEQEQNAEELEQ---------AIKNIDKFINNNQEDAK 276

Query: 122 QEDKVVEKQSI 125
           + ++ +E Q +
Sbjct: 278 KNEEEIENQEV 276

[Close]

BLAST of PI0015564 vs. ExPASy TrEMBL
Match: A0A5D3B9P7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1278G00080 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.7e-06
Identity = 48/131 (36.64%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 2   EVRKVKEDLASFK-------DEVLKMLKSIMDSINEKLTTRNPTKQSQDSIYQNNAPTNS 61
           E+++VK+DL S K       +EVL++L +I+  INE++ T    KQSQ S ++N+APT S
Sbjct: 158 EIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTE---KQSQGSYHENHAPTLS 217

Query: 62  LQNIEDEMNIQRLDDKEVPEQE-EKDKEVEGKDQQNADGCTVDEILQISKFVEELQQKRN 121
           LQ +E+ MNI  LDD E+ E+E E+++  E  +Q          I  I KF+   Q+   
Sbjct: 218 LQRLEERMNIHNLDDAEINEEEIEQEQNAEELEQ---------AIKNIDKFINNNQEDAK 276

Query: 122 QEDKVVEKQSI 125
           + ++ +E Q +
Sbjct: 278 KNEEEIENQEV 276

[Close]

BLAST of PI0015564 vs. ExPASy TrEMBL
Match: A0A5A7SM53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00980 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.5e-06
Identity = 48/131 (36.64%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 2   EVRKVKEDLASFK-------DEVLKMLKSIMDSINEKLTTRNPTKQSQDSIYQNNAPTNS 61
           E+++VK DL S K       +EVL++L +I+  INE++ T    KQSQ S ++N+APT S
Sbjct: 177 EIQEVKNDLESLKNTVENGQNEVLELLNNIITIINERMPTE---KQSQGSYHENHAPTLS 236

Query: 62  LQNIEDEMNIQRLDDKEVPEQE-EKDKEVEGKDQQNADGCTVDEILQISKFVEELQQKRN 121
           LQ +E+ MNI  LDD E+ E+E E+++  E  +Q          I  I KF+   Q+   
Sbjct: 237 LQRLEERMNIHNLDDAEINEEEIEQEQNAEKLEQ---------AIKNIDKFINNNQEDAK 295

Query: 122 QEDKVVEKQSI 125
           + ++ +E Q +
Sbjct: 297 KNEEEIENQEV 295

[Close]

BLAST of PI0015564 vs. ExPASy TrEMBL
Match: A0A5A7T6C2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00010 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.0e-06
Identity = 47/131 (35.88%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 2   EVRKVKEDLASFK-------DEVLKMLKSIMDSINEKLTTRNPTKQSQDSIYQNNAPTNS 61
           E+++VK+DL S K       +EVL++L +I+  INE++ T    KQSQ S ++N+APT S
Sbjct: 158 EIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTE---KQSQGSYHENHAPTLS 217

Query: 62  LQNIEDEMNIQRLDDKEVPEQE-EKDKEVEGKDQQNADGCTVDEILQISKFVEELQQKRN 121
           LQ++E+ MNI  LDD E+ E+E E+++  E  +Q          I  I KF+   Q+   
Sbjct: 218 LQHLEERMNIHNLDDAEINEEEIEQEQNAEELEQ---------AIKNIDKFINNNQEDAK 276

Query: 122 QEDKVVEKQSI 125
           + ++ +E + +
Sbjct: 278 KNEEEIENKEV 276

[Close]

BLAST of PI0015564 vs. ExPASy TrEMBL
Match: A0A5D3CVC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1779G00060 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.9e-05
Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 2   EVRKVKEDLASFK-------DEVLKMLKSIMDSINEKLTTRNPTKQSQDSIYQNNAPTNS 61
           E+++VK+DL S K       +EVL++L +I+  INE++ T    KQSQ S ++N+APT S
Sbjct: 158 EIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTE---KQSQGSYHENHAPTLS 217

Query: 62  LQNIEDEMNIQRLDDKEVPEQE-EKDKEVEGKDQ 88
           LQ +E+ MNI  LDD E+ E+E E+++  E  +Q
Sbjct: 218 LQRLEERMNIHNLDDAEINEEEIEQEQNAEELEQ 248

[Close]

BLAST of PI0015564 vs. NCBI nr
Match: XP_038896481.1 (uncharacterized protein LOC120084732 [Benincasa hispida])

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-06
Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 2   EVRKVKEDLASFKDEVLKMLKSIM------DSINEKLTTRNPTKQSQDSIYQNNAPTNSL 61
           ++ K+ EDL S K+E +K+ K+I+      +S+NEKL T+N  KQSQDS + N  P  SL
Sbjct: 162 DIGKINEDLESLKEETVKISKNIVMLFELFNSMNEKLATKNMEKQSQDSFHPNKPPIASL 221

Query: 62  QNIEDEMNIQRLDDKEV 73
           Q  +DEMNIQ+L+D +V
Sbjct: 222 QRTKDEMNIQQLEDNKV 238

[Close]

BLAST of PI0015564 vs. NCBI nr
Match: TYJ96590.1 (hypothetical protein E5676_scaffold1278G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 5.6e-06
Identity = 48/131 (36.64%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 2   EVRKVKEDLASFK-------DEVLKMLKSIMDSINEKLTTRNPTKQSQDSIYQNNAPTNS 61
           E+++VK+DL S K       +EVL++L +I+  INE++ T    KQSQ S ++N+APT S
Sbjct: 158 EIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTE---KQSQGSYHENHAPTLS 217

Query: 62  LQNIEDEMNIQRLDDKEVPEQE-EKDKEVEGKDQQNADGCTVDEILQISKFVEELQQKRN 121
           LQ +E+ MNI  LDD E+ E+E E+++  E  +Q          I  I KF+   Q+   
Sbjct: 218 LQRLEERMNIHNLDDAEINEEEIEQEQNAEELEQ---------AIKNIDKFINNNQEDAK 276

Query: 122 QEDKVVEKQSI 125
           + ++ +E Q +
Sbjct: 278 KNEEEIENQEV 276

[Close]

BLAST of PI0015564 vs. NCBI nr
Match: TYK15460.1 (hypothetical protein E5676_scaffold477G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 5.6e-06
Identity = 48/131 (36.64%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 2   EVRKVKEDLASFK-------DEVLKMLKSIMDSINEKLTTRNPTKQSQDSIYQNNAPTNS 61
           E+++VK+DL S K       +EVL++L +I+  INE++ T    KQSQ S ++N+APT S
Sbjct: 158 EIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTE---KQSQGSYHENHAPTLS 217

Query: 62  LQNIEDEMNIQRLDDKEVPEQE-EKDKEVEGKDQQNADGCTVDEILQISKFVEELQQKRN 121
           LQ +E+ MNI  LDD E+ E+E E+++  E  +Q          I  I KF+   Q+   
Sbjct: 218 LQRLEERMNIHNLDDAEINEEEIEQEQNAEELEQ---------AIKNIDKFINNNQEDAK 276

Query: 122 QEDKVVEKQSI 125
           + ++ +E Q +
Sbjct: 278 KNEEEIENQEV 276

[Close]

BLAST of PI0015564 vs. NCBI nr
Match: KAA0032264.1 (hypothetical protein E6C27_scaffold219G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 7.3e-06
Identity = 48/131 (36.64%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 2   EVRKVKEDLASFK-------DEVLKMLKSIMDSINEKLTTRNPTKQSQDSIYQNNAPTNS 61
           E+++VK DL S K       +EVL++L +I+  INE++ T    KQSQ S ++N+APT S
Sbjct: 177 EIQEVKNDLESLKNTVENGQNEVLELLNNIITIINERMPTE---KQSQGSYHENHAPTLS 236

Query: 62  LQNIEDEMNIQRLDDKEVPEQE-EKDKEVEGKDQQNADGCTVDEILQISKFVEELQQKRN 121
           LQ +E+ MNI  LDD E+ E+E E+++  E  +Q          I  I KF+   Q+   
Sbjct: 237 LQRLEERMNIHNLDDAEINEEEIEQEQNAEKLEQ---------AIKNIDKFINNNQEDAK 295

Query: 122 QEDKVVEKQSI 125
           + ++ +E Q +
Sbjct: 297 KNEEEIENQEV 295

[Close]

BLAST of PI0015564 vs. NCBI nr
Match: KAA0036929.1 (hypothetical protein E6C27_scaffold86G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-05
Identity = 47/131 (35.88%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 2   EVRKVKEDLASFK-------DEVLKMLKSIMDSINEKLTTRNPTKQSQDSIYQNNAPTNS 61
           E+++VK+DL S K       +EVL++L +I+  INE++ T    KQSQ S ++N+APT S
Sbjct: 158 EIQEVKKDLESLKNTVENGQNEVLELLNNIITIINERMPTE---KQSQGSYHENHAPTLS 217

Query: 62  LQNIEDEMNIQRLDDKEVPEQE-EKDKEVEGKDQQNADGCTVDEILQISKFVEELQQKRN 121
           LQ++E+ MNI  LDD E+ E+E E+++  E  +Q          I  I KF+   Q+   
Sbjct: 218 LQHLEERMNIHNLDDAEINEEEIEQEQNAEELEQ---------AIKNIDKFINNNQEDAK 276

Query: 122 QEDKVVEKQSI 125
           + ++ +E + +
Sbjct: 278 KNEEEIENKEV 276

The following BLAST results are available for this feature:

BLAST of PI0015564 vs.


Match Name	E-value	Identity	Description

BLAST of PI0015564 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CVR6	2.7e-06	36.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3B9P7	2.7e-06	36.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SM53	3.5e-06	36.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7T6C2	6.0e-06	35.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CVC6	3.9e-05	43.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0015564 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896481.1	1.1e-06	48.05	uncharacterized protein LOC120084732 [Benincasa hispida]	[more]
TYJ96590.1	5.6e-06	36.64	hypothetical protein E5676_scaffold1278G00080 [Cucumis melo var. makuwa]	[more]
TYK15460.1	5.6e-06	36.64	hypothetical protein E5676_scaffold477G00300 [Cucumis melo var. makuwa]	[more]
KAA0032264.1	7.3e-06	36.64	hypothetical protein E6C27_scaffold219G00980 [Cucumis melo var. makuwa]	[more]
KAA0036929.1	1.2e-05	35.88	hypothetical protein E6C27_scaffold86G00010 [Cucumis melo var. makuwa]	[more]

BLAST of PI0015564 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0015564.1	PI0015564.1	mRNA