Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCTACTTATTGTCCAACTACAAGCGTTGTTATGACGGTCGCTTCCATCTTATACAACATCCAGACTACTGGCCAGAGTTATCATTCACTGAAGTTTGCCCAAATGCGAACTTACTTAGAAAACCCGGTCGACCCAGAACTACGAGGATCCAGAATGAAATGGACTGGAAGGAGTACGGTCAATCAGTAA
mRNA sequence
ATGGCTGCTACTTATTGTCCAACTACAAGCGTTGTTATGACGGTCGCTTCCATCTTATACAACATCCAGACTACTGGCCAGAGTTATCATTCACTGAAGTTTGCCCAAATGCGAACTTACTTAGAAAACCCGGTCGACCCAGAACTACGAGGATCCAGAATGAAATGGACTGGAAGGAGTACGGTCAATCAGTAA
Coding sequence (CDS)
ATGGCTGCTACTTATTGTCCAACTACAAGCGTTGTTATGACGGTCGCTTCCATCTTATACAACATCCAGACTACTGGCCAGAGTTATCATTCACTGAAGTTTGCCCAAATGCGAACTTACTTAGAAAACCCGGTCGACCCAGAACTACGAGGATCCAGAATGAAATGGACTGGAAGGAGTACGGTCAATCAGTAA
Protein sequence
MAATYCPTTSVVMTVASILYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSRMKWTGRSTVNQ
Homology
BLAST of PI0015532 vs. ExPASy TrEMBL
Match:
A0A0A0KPT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G582750 PE=4 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 1.5e-13
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 0
Query: 1 MAATYCPTTSVVMTVASILYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSRMKWTGRS 60
M AT C ++VVMTVASI N Q GQ YHSLKFA M+TYL+NPVD EL+GS+MKW G+S
Sbjct: 1 MNATCCRHSNVVMTVASIQSNTQIIGQRYHSLKFAPMQTYLKNPVDQELQGSKMKWIGKS 60
Query: 61 TVNQ 65
VNQ
Sbjct: 61 LVNQ 64
BLAST of PI0015532 vs. ExPASy TrEMBL
Match:
A0A0A0KNE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G449150 PE=4 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 7.0e-11
Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = 0
Query: 13 MTVASILYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSRMKWTGRSTVNQ 65
MTVASI N Q GQ YHSLKFA MRTYL++PVD EL GS+MKW G+S VNQ
Sbjct: 1 MTVASIQSNTQIIGQRYHSLKFAPMRTYLKDPVDQELLGSKMKWIGKSLVNQ 52
BLAST of PI0015532 vs. ExPASy TrEMBL
Match:
A0A5A7T0Q1 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002710 PE=4 SV=1)
HSP 1 Score: 72.8 bits (177), Expect = 5.9e-10
Identity = 39/63 (61.90%), Postives = 45/63 (71.43%), Query Frame = 0
Query: 1 MAATYCPTTSVVMTVASILYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSRMKWTGRS 60
M AT C T + VM+V I N QT G SYHSLKFAQMRTYL++ +D EL GS MKW G+S
Sbjct: 52 MNATCCQTLNDVMSVDYIQSNTQTIGLSYHSLKFAQMRTYLKDLIDQELPGSIMKWIGKS 111
Query: 61 TVN 64
VN
Sbjct: 112 LVN 114
BLAST of PI0015532 vs. ExPASy TrEMBL
Match:
A0A5A7U7U0 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004770 PE=4 SV=1)
HSP 1 Score: 69.3 bits (168), Expect = 6.5e-09
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 0
Query: 1 MAATYCPTTSVVMTVASILYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSRMKWTGRS 60
M AT C T++ VM V SI NIQ G S HS KFAQM+TYL++PVD E +GS MKW G+S
Sbjct: 17 MNATCCRTSNNVMPVDSIQSNIQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 76
Query: 61 TVN 64
VN
Sbjct: 77 LVN 79
BLAST of PI0015532 vs. ExPASy TrEMBL
Match:
A0A5A7TI34 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00540 PE=4 SV=1)
HSP 1 Score: 67.4 bits (163), Expect = 2.5e-08
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0
Query: 1 MAATYCPTTSVVMTVASILYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSRMKWTGRS 60
M AT C T++ VM V SI N Q G S HS KFAQM+TYL++PVD E +GS MKW G+S
Sbjct: 342 MNATCCRTSNNVMPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 401
Query: 61 TVN 64
VN
Sbjct: 402 LVN 404
BLAST of PI0015532 vs. NCBI nr
Match:
KAE8653099.1 (hypothetical protein Csa_020145 [Cucumis sativus])
HSP 1 Score: 75.5 bits (184), Expect = 1.9e-10
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 0
Query: 13 MTVASILYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSRMKWTGRSTVNQ 65
MTVASI N Q GQ YHSLKFA M+TYL++PVD EL+GS+MKW G+S VNQ
Sbjct: 1 MTVASIKSNTQIIGQRYHSLKFAPMQTYLKDPVDQELQGSKMKWIGKSLVNQ 52
BLAST of PI0015532 vs. NCBI nr
Match:
KAA0035171.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 72.8 bits (177), Expect = 1.2e-09
Identity = 39/63 (61.90%), Postives = 45/63 (71.43%), Query Frame = 0
Query: 1 MAATYCPTTSVVMTVASILYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSRMKWTGRS 60
M AT C T + VM+V I N QT G SYHSLKFAQMRTYL++ +D EL GS MKW G+S
Sbjct: 52 MNATCCQTLNDVMSVDYIQSNTQTIGLSYHSLKFAQMRTYLKDLIDQELPGSIMKWIGKS 111
Query: 61 TVN 64
VN
Sbjct: 112 LVN 114
BLAST of PI0015532 vs. NCBI nr
Match:
KAA0051993.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 69.3 bits (168), Expect = 1.3e-08
Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 0
Query: 1 MAATYCPTTSVVMTVASILYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSRMKWTGRS 60
M AT C T++ VM V SI NIQ G S HS KFAQM+TYL++PVD E +GS MKW G+S
Sbjct: 17 MNATCCRTSNNVMPVDSIQSNIQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 76
Query: 61 TVN 64
VN
Sbjct: 77 LVN 79
BLAST of PI0015532 vs. NCBI nr
Match:
KAA0042980.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 67.4 bits (163), Expect = 5.1e-08
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0
Query: 1 MAATYCPTTSVVMTVASILYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSRMKWTGRS 60
M AT C T++ VM V SI N Q G S HS KFAQM+TYL++PVD E +GS MKW G+S
Sbjct: 342 MNATCCRTSNNVMPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 401
Query: 61 TVN 64
VN
Sbjct: 402 LVN 404
BLAST of PI0015532 vs. NCBI nr
Match:
KAA0031833.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 67.4 bits (163), Expect = 5.1e-08
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0
Query: 1 MAATYCPTTSVVMTVASILYNIQTTGQSYHSLKFAQMRTYLENPVDPELRGSRMKWTGRS 60
M AT C T++ VM V SI N Q G S HS KFAQM+TYL++PVD E +GS MKW G+S
Sbjct: 105 MNATCCRTSNNVMPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 164
Query: 61 TVN 64
VN
Sbjct: 165 LVN 167
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KPT2 | 1.5e-13 | 67.19 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G582750 PE=4 SV=1 | [more] |
A0A0A0KNE8 | 7.0e-11 | 71.15 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G449150 PE=4 SV=1 | [more] |
A0A5A7T0Q1 | 5.9e-10 | 61.90 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
A0A5A7U7U0 | 6.5e-09 | 60.32 | Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... | [more] |
A0A5A7TI34 | 2.5e-08 | 58.73 | Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... | [more] |
Match Name | E-value | Identity | Description | |
KAE8653099.1 | 1.9e-10 | 69.23 | hypothetical protein Csa_020145 [Cucumis sativus] | [more] |
KAA0035171.1 | 1.2e-09 | 61.90 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
KAA0051993.1 | 1.3e-08 | 60.32 | serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... | [more] |
KAA0042980.1 | 5.1e-08 | 58.73 | serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... | [more] |
KAA0031833.1 | 5.1e-08 | 58.73 | serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... | [more] |
Match Name | E-value | Identity | Description | |