PI0015173 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAGAAAAACAAACTCTCTCTCTCTCTCTCTCTCTATTCAAATTTCAAATCACCTTCACACAATCTACCCCATGGCCAAGAACAACCACTCCCTTTCAATTTCAAATCCAGGATCTTCTTCCTTAGGCTCCATGGACGAAATCATCAAAGTCTTCAACAAATTCGACAAGAACGGCGACGGCAAGATTTCCGTCACCGAACTCGGCGCTGCTCTCGGTGAACTCAGCGGCAACATCTCCACCGAAGAGATCCACCGCATTATGTCCGAGATCGATAAGGACGGTGACGGTTTCATCGACCTCGACGAGTTCACCGACTTCACCTCCTCTTCCACTGGTGGTAACAAAGATCTGCAGGACGCTTTCGATCTCTACGATATTGATAAGAACGGCTTAATCTCTGCCAAGGAGTTGCACTCTGTTCTCAAACGCCTTGGTGAAAAATGTAGCCTCAAAGATTGTTGCCGGATGATCAGTTCTGTTGATGTTGACGGTGATGGACATGTAAATTTCGAGGAATTCAAGAAGATGATGACGAGATCTTAGTGTTCATCGCCAGTAGAGAGGTAGTTTCACAAATTTAATCAATTTTAGGCTTAGAATTTCGAAACCAAAATTGAGTATTATCAGTTGATTCTTAGTGTGTACAGTCTATGAATCTATCCTTTCTTTCAGGGTTTGTAACCGATTTAGGGCACTAAAACGTCTCTACAATGAATTTCTCCTCTGGTTTTAGATCTTAATCGGAGATCCGAAAAGAAAAAAAAAACAAACAGATTATAAGTTCATATCATCTCTCTCTAATTGATTCCGATTTTCTGTTTCTGAAAGGGATGGATGAATCCGAAGTTGAGGGAGTAAATTTTGTGTGCTGAATTTGTGGAATATTTGATTGATTGATATAGTTACTGAAGGAATTATTTGCATCGGTTAGATTATTTATAAACATAATTTGGTAATTTCTTCAAA AAAAAGAAAAACAAACTCTCTCTCTCTCTCTCTCTCTATTCAAATTTCAAATCACCTTCACACAATCTACCCCATGGCCAAGAACAACCACTCCCTTTCAATTTCAAATCCAGGATCTTCTTCCTTAGGCTCCATGGACGAAATCATCAAAGTCTTCAACAAATTCGACAAGAACGGCGACGGCAAGATTTCCGTCACCGAACTCGGCGCTGCTCTCGGTGAACTCAGCGGCAACATCTCCACCGAAGAGATCCACCGCATTATGTCCGAGATCGATAAGGACGGTGACGGTTTCATCGACCTCGACGAGTTCACCGACTTCACCTCCTCTTCCACTGGTGGTAACAAAGATCTGCAGGACGCTTTCGATCTCTACGATATTGATAAGAACGGCTTAATCTCTGCCAAGGAGTTGCACTCTGTTCTCAAACGCCTTGGTGAAAAATGTAGCCTCAAAGATTGTTGCCGGATGATCAGTTCTGTTGATGTTGACGGTGATGGACATGTAAATTTCGAGGAATTCAAGAAGATGATGACGAGATCTTAGTGTTCATCGCCAGTAGAGAGGTAGTTTCACAAATTTAATCAATTTTAGGCTTAGAATTTCGAAACCAAAATTGAGTATTATCAGTTGATTCTTAGTGTGTACAGTCTATGAATCTATCCTTTCTTTCAGGGTTTGTAACCGATTTAGGGCACTAAAACGTCTCTACAATGAATTTCTCCTCTGGTTTTAGATCTTAATCGGAGATCCGAAAAGAAAAAAAAAACAAACAGATTATAAGTTCATATCATCTCTCTCTAATTGATTCCGATTTTCTGTTTCTGAAAGGGATGGATGAATCCGAAGTTGAGGGAGTAAATTTTGTGTGCTGAATTTGTGGAATATTTGATTGATTGATATAGTTACTGAAGGAATTATTTGCATCGGTTAGATTATTTATAAACATAATTTGGTAATTTCTTCAAA ATGGCCAAGAACAACCACTCCCTTTCAATTTCAAATCCAGGATCTTCTTCCTTAGGCTCCATGGACGAAATCATCAAAGTCTTCAACAAATTCGACAAGAACGGCGACGGCAAGATTTCCGTCACCGAACTCGGCGCTGCTCTCGGTGAACTCAGCGGCAACATCTCCACCGAAGAGATCCACCGCATTATGTCCGAGATCGATAAGGACGGTGACGGTTTCATCGACCTCGACGAGTTCACCGACTTCACCTCCTCTTCCACTGGTGGTAACAAAGATCTGCAGGACGCTTTCGATCTCTACGATATTGATAAGAACGGCTTAATCTCTGCCAAGGAGTTGCACTCTGTTCTCAAACGCCTTGGTGAAAAATGTAGCCTCAAAGATTGTTGCCGGATGATCAGTTCTGTTGATGTTGACGGTGATGGACATGTAAATTTCGAGGAATTCAAGAAGATGATGACGAGATCTTAG MAKNNHSLSISNPGSSSLGSMDEIIKVFNKFDKNGDGKISVTELGAALGELSGNISTEEIHRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS Homology
BLAST of PI0015173 vs. ExPASy Swiss-Prot
Match: Q9C8Y1 (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 4.0e-41 Identity = 88/148 (59.46%), Postives = 107/148 (72.30%), Query Frame = 0
BLAST of PI0015173 vs. ExPASy Swiss-Prot
Match: P25070 (Calcium-binding protein CML24 OS=Arabidopsis thaliana OX=3702 GN=CML24 PE=2 SV=2) HSP 1 Score: 167.5 bits (423), Expect = 1.2e-40 Identity = 88/147 (59.86%), Postives = 105/147 (71.43%), Query Frame = 0
BLAST of PI0015173 vs. ExPASy Swiss-Prot
Match: Q9LE22 (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 3.8e-39 Identity = 82/157 (52.23%), Postives = 109/157 (69.43%), Query Frame = 0
BLAST of PI0015173 vs. ExPASy Swiss-Prot
Match: Q9M7R0 (Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 6.6e-36 Identity = 80/140 (57.14%), Postives = 97/140 (69.29%), Query Frame = 0
BLAST of PI0015173 vs. ExPASy Swiss-Prot
Match: Q9C9U8 (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 PE=1 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 4.3e-35 Identity = 78/151 (51.66%), Postives = 107/151 (70.86%), Query Frame = 0
BLAST of PI0015173 vs. ExPASy TrEMBL
Match: A0A5A7UHX3 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001160 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77 Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0
BLAST of PI0015173 vs. ExPASy TrEMBL
Match: A0A1S3C5W9 (probable calcium-binding protein CML27 OS=Cucumis melo OX=3656 GN=LOC103496821 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77 Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0
BLAST of PI0015173 vs. ExPASy TrEMBL
Match: A0A0A0LCM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G319280 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.4e-76 Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0
BLAST of PI0015173 vs. ExPASy TrEMBL
Match: A0A6J1CNU4 (probable calcium-binding protein CML23 OS=Momordica charantia OX=3673 GN=LOC111013180 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62 Identity = 126/156 (80.77%), Postives = 139/156 (89.10%), Query Frame = 0
BLAST of PI0015173 vs. ExPASy TrEMBL
Match: A0A6J1G9H5 (probable calcium-binding protein CML23 OS=Cucurbita moschata OX=3662 GN=LOC111452166 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61 Identity = 126/156 (80.77%), Postives = 137/156 (87.82%), Query Frame = 0
BLAST of PI0015173 vs. NCBI nr
Match: XP_008457051.1 (PREDICTED: probable calcium-binding protein CML27 [Cucumis melo] >KAA0053141.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa] >TYK01546.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]) HSP 1 Score: 297.4 bits (760), Expect = 7.5e-77 Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 0
BLAST of PI0015173 vs. NCBI nr
Match: XP_004145834.1 (probable calcium-binding protein CML23 [Cucumis sativus]) HSP 1 Score: 295.4 bits (755), Expect = 2.8e-76 Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 0
BLAST of PI0015173 vs. NCBI nr
Match: KAE8650604.1 (hypothetical protein Csa_010664 [Cucumis sativus]) HSP 1 Score: 280.8 bits (717), Expect = 7.2e-72 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of PI0015173 vs. NCBI nr
Match: XP_038879983.1 (probable calcium-binding protein CML23 [Benincasa hispida]) HSP 1 Score: 270.4 bits (690), Expect = 9.8e-69 Identity = 141/160 (88.12%), Postives = 147/160 (91.88%), Query Frame = 0
BLAST of PI0015173 vs. NCBI nr
Match: XP_022143269.1 (probable calcium-binding protein CML23 [Momordica charantia]) HSP 1 Score: 249.2 bits (635), Expect = 2.3e-62 Identity = 126/156 (80.77%), Postives = 139/156 (89.10%), Query Frame = 0
BLAST of PI0015173 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 ) HSP 1 Score: 169.1 bits (427), Expect = 2.9e-42 Identity = 88/148 (59.46%), Postives = 107/148 (72.30%), Query Frame = 0
BLAST of PI0015173 vs. TAIR 10
Match: AT5G37770.1 (EF hand calcium-binding protein family ) HSP 1 Score: 167.5 bits (423), Expect = 8.3e-42 Identity = 88/147 (59.86%), Postives = 105/147 (71.43%), Query Frame = 0
BLAST of PI0015173 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 162.5 bits (410), Expect = 2.7e-40 Identity = 82/157 (52.23%), Postives = 109/157 (69.43%), Query Frame = 0
BLAST of PI0015173 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 162.5 bits (410), Expect = 2.7e-40 Identity = 82/157 (52.23%), Postives = 109/157 (69.43%), Query Frame = 0
BLAST of PI0015173 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family ) HSP 1 Score: 149.1 bits (375), Expect = 3.1e-36 Identity = 78/151 (51.66%), Postives = 107/151 (70.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|