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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGTGTTCTAATGAAAAATTACAATGGAAGTTATGGCAAAAATGAGGAATAAAAAAGCAAATGTAGGCAAAAACGTGTGCATCCGTCACTGTTCGTAATGCAGTGGCGCTTCAAGGCAGCTTATGGCATTTTCGTAATTGCTTCCAACTTTTGACTTTTCGTGTAATTTTGCTTGAAATTAAGTCACTTTTGCATTGTTTGGTCTATTGCTTCCCTTGATTAATATTATCTACAAAATAAGGGATTTGATGAATAACTATAGCTAAACTCGGGCATATTGACTTACAAAACATAACACTTTTACATAGTCCTAACAAAGACGTATAGTTTTTTCTCAATTCTTTTTACTGAATACTCATTTCGATAATTGACGTTGTCTATTAATTAATTTAAAATAAATACAAAGTAAAATTTTCAAATTAATTTCAATGGTGACGAAAAATAGTAAGACATAATTAATTATAGTTATTTGAATTCTTATATATTAATTAACATATATTATCACTAAACATTGAAAAATTATTATTAAGTGAAAAATCAAAATTAGAAATGTAAATCTCAAATCCCACAAACAAAATTGAAACAAAATTCAAATCTAACATGTTGAAATCAAGCTCAAAACTTAAGAACTAAAACGGTACAATTTTGAAACTCATGAACAAAATAGAAACTAGATTCAAAATCTAACAAATAAAAATATATTTTTCTCCTAGTTTTATAACTTATTTAGAAAGCGAAAAAACGTAAGTATTAATATAAAGGAACTTTTCTAGAAAATTTGTTGTAGATGGTAAAATTGTTGCACATATTTATAAATATAGAAAAAATTTATAGTCTATCAACATCTATTAGTAATAAATGATAATAGTCTATCAGTATCTATCAATCTATATTAGTTGTATTTTTCTATATTTGTAAATATTTTGATACATTTTTAAATATTTAATAAAACATATTAGTGTATATATATATATTTCCACGTCTCATATAATTAAATAAATAATCTTCCTTCACTTTCTATTCTCATTTTATAATTTGCAATTTGTCTTCATTTTATATTTGCTTTTGTACTTTTCGATGCATTTGTTTCTTTCTTTTTCTTATGTCTATTGGATATTTCTTTTTTCACGTACGGTAGTATTTGAAAATACCAATGCAATTTATTTTTGGATTCACATAGTATATATGATTAATTCTACTTTCATTTTTTTTAAACTACAATATTGGAGATGAAACGTTGGGTCTCTTTAAAGGTCATATCAATTATTGGTAAATTAAGTTTATTTTGATAGTATTAATTTAAAATTAAAGTACAATACGACGGAAAATAATAGACATATATCCTCTTCTTTAAAGAGTATAAAGTTTGAGTTTGGATATATACATACATGTACATATGTATTCTTTTTTAGATGAGAGTAAATATCTTTTTGGTCTCTAGATTTTGAGTTTAACTTCCATTTGATTGTTAGGATTTCAAAATCTTATCGTTTTAGTTATTAAGTTTTGATTTTGATTTCAATTTACTTATCAAAGTTCGAGAAAATATGACAAAATGTCAATGAATTTCTTTAAAAGAAAGTTGGAGATGTTGTAATTTTTACTTATAATCCAAAAACCAACAATACTCGCCCGCGGATTTAGTAGGTCCAAAGAGGACTCGAACCTCTTTTTAACTTTATGCTATTTATATTATATATTATATATAATCATATTAATAGCTAACTCGGTGATAAAAGTGTTTTCTAACCCTTCTATACCTAAGTTCAAATCTCGCTTTCTAAATCGTTAAAACTATGTAAGGTGGTAGCGATAGGGACCGGATTATATTTATTGCATTCAACACTTATTATATGTCCCTACGGCGTACGTGTGAAGGGAGCGGCACGTGTTTGTACGAACACGTTTTTGCAAACAGAGGATCCCAGCTCCTAGACAATCCCATGGAGTTTTCGTAGAAAAAGAGACACTCCAATCTTTGTTCCTTTTTTTTTAAAAAAAAGAATCCCATTTTCTTGTTCTTCCATCTTCAATCTTCAAGGAATCGTTGGTAAGATATCCATTTTCTTCTGGGTCCTCTCTCTTTTTCTCTTAGCATTTATAGTCTCATCTTTCATTTCTGACTACAAACTGTTTGATGAAATGCCTGTTTAGCATTATAATGTGATCCACCGCCATTTTTTCACATACGAGTTTGACCACCAATAATATCTTATCTTCTTTATTTTATTTTATATATTTTGTTTTGTTTCATCATCTGTCACGTCCTTCCCCCCCCATTCCCCACTTGAATGCTGCTGCTTGCCAAAATCTTTGCTTCCCAACTTGCATTTTTTAGCTATTTGATTCATCACCGTCCTTTTGATTCTGTGCCCACTAAGTTTTTGATCTTATTCTATTTGCCATTTTGTTTCATTGTTTTCTGGGCATTTCTTGCATTGGGTTTCTCCCCATTGTCATTTTTTGTTATATAATTTTACCTCAAATCTGACTCCCATTGTGTTTTTGTATTACTCTGTTGAACAAACCCTTTATCTATTGGTTAACTGGCCTGCTCAGTCCTATATTTAGAAGGTTTAGCTGGAGTTTGAACGTTGTCCTTTAAAAGAAAAAGGAAAAAGATTGAATTTTTGTTTTGTTGCATTGATCTGTTTCTTGAAATATCTTTTTAATGTCAAAACCAATTTGGAATATCAGTGGAATGATTGACCTGGTTCATATTAATTTTTAGCCAAAACTTGACAACTAAAGACTCGAGTGTATGTAACCAAGCACTCACTTGCGACACAAATGGTTGTGATTGAGAAAGATTACCTTCCCATATTTCCTTCTTGCTTGAAGGTTTTGTTTTGTACATTAGACTGTAACTAGTGAGAACAATTGTGAATGAAAAATATGGGAAACTATGATCTCCCCTTTATTGTTCTTTATTTGAGGATTTTTTTTAATTAAATGAATATATACATTAACTAATCCATAAAATAATTTCTTAACTCTTACCTGTTACAGAGCTGTGAAGATCACTTCGAGGGAAAAAAAACTTATAAACACCCTTCTTCAGAAGAGACACCTAACAGACACCTTAAAGATACTAAAATGTAATATCTTTTTTTCATGTAATTTGTTGCTTTTCTGACAACACAATTGAGAACTAATTTCCATTTCAGAAAACAAAAAATAATATCATACAAAATATTCTCTTTCTGATGGAAGTATTAATCATTAGGAACTCCTAAATTATCACTATGTTGCTTAATTAATTTAAAAAAATTATGTGATCCAAGAACCTCCACACCACAGGCATGCCAAAAGAAGGAGTGAGTCAAGCCCTTTAGGCTAATAATGATTAATTATATTGTATATGATTTGATTTTGTATCCCATTTTCTTTTCCAGCCAAACCCAACCAGGCTGGCTTGCCGTTTGCCAACAGAGTCTATGAGCTCGTGCATTGGGACTCATGAAAATGGGGTTTTGTATAAATTAGGATTCTTTTGTTTTTGTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTGTGGATCAGAGAAAGGCCTCGTAACTTCAACCAACCACATGATTTATTGCTTGTCTTCTCTGCTTTTCTTTCTTCACAAACAAAAGGAGATTTTCTTTTAAAAATTGAAGGATCTTCTTCTGCAGACTGCATGCAAAAACATGACTGCACAACAAATGATGAATTTATATATAAACATAGAGAGAGAGAGAGAAGCATGGTAGTGTCCTTTTCTTCTTCTTCTTCACATTTCATTAATTATATTTTGTTTGTAATTTTTTTTGCAGAGTTTTAGCAAATGGCAATTGCC mRNA sequence ATGTCGATAGGGACCGGATTATATTTATTGCATTCAACACTTATTATATGTCCCTACGGCGTACGTGTGAAGGGAGCGGCACGTGTTTGTACGAACACGTTTTTGCAAACAGAGGATCCCAACACTCCAATCTTTGTTCCTTTTTTTTTAAAAAAAAGAATCCCATTTTCTTGTTCTTCCATCTTCAATCTTCAAGGAATCGTTGAGCTGTGAAGATCACTTCGAGGGAAAAAAAACTTATAAACACCCTTCTTCAGAAGAGACACCTAACAGACACCTTAAAGATACTAAAATCCAAACCCAACCAGGCTGGCTTGCCGTTTGCCAACAGAGTCTATGAGCTCGTGCATTGGGACTCATGAAAATGGGAGTTTTAGCAAATGGCAATTGCC Coding sequence (CDS) ATGTCGATAGGGACCGGATTATATTTATTGCATTCAACACTTATTATATGTCCCTACGGCGTACGTGTGAAGGGAGCGGCACGTGTTTGTACGAACACGTTTTTGCAAACAGAGGATCCCAACACTCCAATCTTTGTTCCTTTTTTTTTAAAAAAAAGAATCCCATTTTCTTGTTCTTCCATCTTCAATCTTCAAGGAATCGTTGAGCTGTGA Protein sequence MSIGTGLYLLHSTLIICPYGVRVKGAARVCTNTFLQTEDPNTPIFVPFFLKKRIPFSCSSIFNLQGIVEL
Homology
BLAST of PI0014444 vs. ExPASy TrEMBL
Match: A0A0A0LWD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580250 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.5e-14 Identity = 50/72 (69.44%), Postives = 52/72 (72.22%), Query Frame = 0 Query: 15 IICPYGVRVK--GAARVCTNTFLQTEDP--------------NTPIFVPFFLKKRIP-FS 70 +ICPYGVRVK GAARVCTNTFLQTEDP +TPIFV FFLKKR FS Sbjct: 13 VICPYGVRVKGVGAARVCTNTFLQTEDPSSKKIVPWSFRRNRDTPIFVIFFLKKRNSLFS 72
BLAST of PI0014444 vs. NCBI nr
Match: KAE8653414.1 (hypothetical protein Csa_007237, partial [Cucumis sativus]) HSP 1 Score: 67.8 bits (164), Expect = 4.3e-08 Identity = 42/72 (58.33%), Postives = 44/72 (61.11%), Query Frame = 0 Query: 15 IICPYGVRVKGAAR--VCTNTFLQTEDP--------------NTPIFVPFFLKKRIP-FS 70 +ICPYGVRVK R FLQTEDP +TPIFV FFLKKR FS Sbjct: 12 VICPYGVRVKEWERHVFVRTRFLQTEDPSSKKIVPWSFRRNRDTPIFVIFFLKKRNSLFS 71
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LWD6 | 1.5e-14 | 69.44 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580250 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAE8653414.1 | 4.3e-08 | 58.33 | hypothetical protein Csa_007237, partial [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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