Homology
BLAST of PI0013838 vs. ExPASy Swiss-Prot
Match:
P30181 (DNA topoisomerase 1 alpha OS=Arabidopsis thaliana OX=3702 GN=TOP1A PE=1 SV=1)
HSP 1 Score: 1013.4 bits (2619), Expect = 1.5e-294
Identity = 574/943 (60.87%), Postives = 687/943 (72.85%), Query Frame = 0
Query: 1 MAVETFGKAPMFDD---DDEDNMPIVFKRSS--ASRQNQLDSEIKHSQAQRLNKLPGRQG 60
M ET K P+ D+ D +D+ P+ FKR++ AS NQ S + S+A K+ +
Sbjct: 1 MGTETVSK-PVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPMR- 60
Query: 61 SDLCSTNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMD 120
S + S NG + +N KTS ++S + S +SK+SP + PL + +++K +
Sbjct: 61 SPVTSPNGTTPSN--------KTSIVKSSMPS-SSSKASPAKSPLRNDMPSTVKDRSQLQ 120
Query: 121 SRPKNLVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKS 180
K+++ + E+ DSEDD+PLS L GN + VS S KK+
Sbjct: 121 -----------KDQS---ECKIEHEDSEDDRPLSSILSGNKGPTSSRQVS--SPQPEKKN 180
Query: 181 SGD-------------SDDEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTS 240
+GD SDDE P+SS F+ K SG+ G Q DEKKPLV K+HQNGST
Sbjct: 181 NGDRPLDRASRIIKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTV 240
Query: 241 RDKLQKPAVLSSKRPLPNADSHSPSQFSTKKPKLSDSSSPLSSK--------------LV 300
++++ VL KRPL + S Q S KK K+S S + + K LV
Sbjct: 241 KNEVPNGKVL-GKRPLEK--NSSADQSSLKKAKISASPTSVKMKQDSVKKEIDDKGRVLV 300
Query: 301 S--LKAKQ-------EVDDDDDHIPISQRMKMVSATVN-------------KSSSSKPAV 360
S +KAKQ DDDDD +PIS+R K S+ N SS++KP
Sbjct: 301 SPKMKAKQLSTREDGTDDDDDDDVPISKRFKSDSSNSNTSSAKPKAVKLNSTSSAAKPKA 360
Query: 361 SKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPPYQTHGV 420
VVS + K +KK K SKY S+K PS+GDGQKKWTTLVHNGVIFPPPY+ HG+
Sbjct: 361 RNVVSPRSRAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWTTLVHNGVIFPPPYKPHGI 420
Query: 421 KMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVIQNLDDC 480
K+LYKGKPVDLT +QEEVATMFAVM++TDY KP+F+ENFWNDWR+LLGK HVIQ LDDC
Sbjct: 421 KILYKGKPVDLTIEQEEVATMFAVMRETDYYTKPQFRENFWNDWRRLLGKKHVIQKLDDC 480
Query: 481 DFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGL 540
DFTPIY+W+ EKEKKKQM+TEEKK LKEEK+KQEEKYMWA++DGVKEK+GNFRVEPPGL
Sbjct: 481 DFTPIYEWHLEEKEKKKQMSTEEKKALKEEKMKQEEKYMWAVVDGVKEKIGNFRVEPPGL 540
Query: 541 FRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDP 600
FRGRGEHPKMGKLK+RI P +IT+NIGKGAPIPECPI GERWKEV+HDNTVTWLAFW DP
Sbjct: 541 FRGRGEHPKMGKLKKRIHPCEITLNIGKGAPIPECPIAGERWKEVKHDNTVTWLAFWADP 600
Query: 601 INQKEFKYVFLAASSSLKGQSDKEKYEKARMLKVN------AYTKDFTSKDPTRRQIAVA 660
IN KEFKYVFL A SSLKG SDKEKYEKAR L + YTK+FT+KD RQIAVA
Sbjct: 601 INPKEFKYVFLGAGSSLKGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVA 660
Query: 661 TYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYENTVEVE 720
TYLIDKLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN ++F+FLGKDSI+Y NTVEVE
Sbjct: 661 TYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVE 720
Query: 721 LPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNR 780
V+KAI QFQ+GKS TDDLFD+LDT+KLNAHLK+L+PGLTAKVFRTYNASITLD+ML++
Sbjct: 721 PLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQ 780
Query: 781 GTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKELKIDL 840
TKDGDV++KIV YQ ANKEVAIICNHQRTVSK+HGAQ+ +L +I EL+++LKELK +L
Sbjct: 781 ETKDGDVTQKIVVYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNL 840
Query: 841 DRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKI 884
DRAKKGKPPL+GSDGK+ R+L P A EKKI+Q +AKIEK+ERDM TKEDLKTVALGTSKI
Sbjct: 841 DRAKKGKPPLEGSDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKI 900
BLAST of PI0013838 vs. ExPASy Swiss-Prot
Match:
Q9FJ79 (DNA topoisomerase 1 beta OS=Arabidopsis thaliana OX=3702 GN=TOP1B PE=1 SV=1)
HSP 1 Score: 1011.1 bits (2613), Expect = 7.5e-294
Identity = 579/942 (61.46%), Postives = 685/942 (72.72%), Query Frame = 0
Query: 1 MAVETFGKAPM------FDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQ 60
MA E F K + ++D+DED++P+VFKR+S + A N+ P
Sbjct: 1 MATEAFVKPVVPNGHDGYEDEDEDDIPLVFKRNS-------------NTAATTNR-PSPI 60
Query: 61 GSDLCSTNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSM 120
+ + ++ S+ + M S P TSP RS S ++S P P + S+ S S
Sbjct: 61 NNAMRNSAIGSTKSSPPMRS-PLTSPNRSASSSTRSSMMKPAL-PSSSSVQRSTLKSPLR 120
Query: 121 DSRPKNLVNAAVKEENVSIK-PS---QENSDSEDDKPLSIRLKGNSNQPNK-----GLVS 180
D R + KE N K PS ++ DSEDDKPLS RLK +S + K G S
Sbjct: 121 DDR-----SVVAKERNGFGKAPSVSKSDDEDSEDDKPLSARLKLDSKEVTKQPSSSGRGS 180
Query: 181 T---VSKNKVKKSSGDS-------DDEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKV 240
T V K+ ++ D+ P+SS Q K + G SK ++K+PLV +
Sbjct: 181 TQQAVQKSNMRPQGLSDYTKKKVLDERAPMSSTVQTKTSVGTSSSKPVHIEQKRPLVNNI 240
Query: 241 HQNG---STSRDKLQKPAVLSSKRPLPNADSHSPSQFSTKKPKLS--------------- 300
+NG T Q PA KRPL S +Q S K+PKLS
Sbjct: 241 DRNGLKPKTEGHSSQAPA----KRPLEKGS--SSNQSSVKRPKLSEPARPVKVEQGSHIS 300
Query: 301 ----------DSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSSSSKPAVS 360
D+S PL + ++ K++ D DDH+PI+ RMK S+ NKSSS+KP+ S
Sbjct: 301 ATQDAKGKNLDASKPLRANQATV--KEDNSDGDDHVPIASRMKSDSSN-NKSSSAKPSSS 360
Query: 361 KVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPPYQTHGVK 420
K+++SS + +K K VK SKY KS+K LPS GDGQKKW TL HNGVIFPPPY+ HGVK
Sbjct: 361 KMIASSSRTIAQKPNKWVKDSKYSKSSKSLPS-GDGQKKWKTLQHNGVIFPPPYKRHGVK 420
Query: 421 MLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVIQNLDDCD 480
+L++GKPVDLTP+QEEVATMFAVM++T+Y KPKF+ENFWNDWRKLLGKNH+I++LDDCD
Sbjct: 421 ILFQGKPVDLTPEQEEVATMFAVMRETEYYKKPKFRENFWNDWRKLLGKNHMIKSLDDCD 480
Query: 481 FTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGLF 540
FTPIY+WY EKE KKQMT EEK+ +KEEKLKQEEKYMWA+LDGV+E++GNFRVEPPGLF
Sbjct: 481 FTPIYEWYMQEKETKKQMTAEEKRIVKEEKLKQEEKYMWAVLDGVRERIGNFRVEPPGLF 540
Query: 541 RGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDPI 600
RGRGEHPKMGKLK+RIRP DITINIGK APIPECPIPGERWKEV+HDNTVTWLAFW+DPI
Sbjct: 541 RGRGEHPKMGKLKKRIRPCDITINIGKEAPIPECPIPGERWKEVKHDNTVTWLAFWSDPI 600
Query: 601 NQKEFKYVFLAASSSLKGQSDKEKYEKARMLKVN------AYTKDFTSKDPTRRQIAVAT 660
N KEFKYVFLAASSSLKGQSDKEKYEKAR L + AYTKDF +KD T+RQIAVAT
Sbjct: 601 NPKEFKYVFLAASSSLKGQSDKEKYEKARKLHNHIGSIRAAYTKDFNNKDVTKRQIAVAT 660
Query: 661 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYENTVEVEL 720
YLIDKLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN L+F+FLGKDSI+Y NTVEVE
Sbjct: 661 YLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEP 720
Query: 721 PVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRG 780
V+KAI QFQ+GKS TDDLFD+LDT+KLN HLK+LM GLTAKVFRTYNASITLD ML++
Sbjct: 721 LVYKAIGQFQAGKSKTDDLFDELDTSKLNTHLKELMAGLTAKVFRTYNASITLDLMLSKE 780
Query: 781 TKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKELKIDLD 840
T+DGDV EK+V YQ ANKEVAIICNHQRTVSKSHGAQ+ +L KI ELR+ +KEL IDLD
Sbjct: 781 TRDGDVPEKVVVYQQANKEVAIICNHQRTVSKSHGAQVEKLAVKIEELREQIKELNIDLD 840
Query: 841 RAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKIN 884
RAKKG+ PL GSDGK+KRNLTPEALEKKI QT KIEK+ERDM+TKED+KTVALGTSKIN
Sbjct: 841 RAKKGRTPLMGSDGKRKRNLTPEALEKKIMQTQGKIEKMERDMQTKEDMKTVALGTSKIN 900
BLAST of PI0013838 vs. ExPASy Swiss-Prot
Match:
P93119 (DNA topoisomerase 1 OS=Daucus carota OX=4039 GN=TOP1 PE=2 SV=1)
HSP 1 Score: 818.9 bits (2114), Expect = 5.4e-236
Identity = 478/810 (59.01%), Postives = 571/810 (70.49%), Query Frame = 0
Query: 120 NLVNAAVKEENVSIKPSQENSDSEDDKPLSIR-----LKGNSNQ----PNKGLVSTVSKN 179
N++ +KEE S S+ DS+DDKPLS + L GNS+ N S +
Sbjct: 16 NVMEKTLKEEGQSRSNSE---DSDDDKPLSHKLSSGALNGNSHHIRMGSNLSCPSPYTSP 75
Query: 180 KVKKSSGDSDDEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPA 239
K + G +DE+ LSS+ Q+ +G ++ DE KPL +L+ P+
Sbjct: 76 KPRIIKG-PEDEMLLSSELQLN--AGASNAESSDSDESKPLA-----------SELEDPS 135
Query: 240 VLSSKRPLPNADSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMK 299
+KRPL + PS +KK KLS+ S+P + KL + + ++ DDD IS R K
Sbjct: 136 SSLNKRPLIQPKNSDPS--PSKKAKLSEPSAPTNRKLKTAEQEEAAADDDP--SISNRNK 195
Query: 300 MVSATVNKSSSSKPAVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTL 359
+ +K S K VS+S+ K V SK +K +L +GQ L
Sbjct: 196 KSTTPASKVSDKKKRPD--VSASVNK--------VDFSKSLKVPLVLVKGRNGQ----PL 255
Query: 360 VHNGVIFPPPYQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDW 419
VHNGVIFPP Y+ HGVKMLY+ PVDLTP+QEEVATMFAVM +T+YM KPKF+ENF +DW
Sbjct: 256 VHNGVIFPPLYKPHGVKMLYRENPVDLTPEQEEVATMFAVMLETEYMTKPKFRENFMSDW 315
Query: 420 RKLLGKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLK-QEEKYMWAIL 479
RK+LG+ H+IQNL+DCDFTPIY+W+Q EKEKKKQM+T+EKK +KE K + ++EKYMWA++
Sbjct: 316 RKILGEKHIIQNLEDCDFTPIYEWHQREKEKKKQMSTDEKKAIKEGKDETRKEKYMWAVV 375
Query: 480 DGV-KEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPS-DITINIGKGAPIPECPIPGER 539
DG+ +EKVGNFRV + + K ++K+ + DITINIGK APIPE PIPGER
Sbjct: 376 DGMSREKVGNFRVGTTRVVQRSWRASKDPQVKKNVYSQIDITINIGKDAPIPEPPIPGER 435
Query: 540 WKEVRHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK-------V 599
WKE+RHDNTVTWLAFWNDPIN KEFKYVFLAASSSLKG+ +EKYEK+R LK
Sbjct: 436 WKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGKVTREKYEKSRKLKDYIEGIRA 495
Query: 600 NAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNL 659
AYTKDF SKD +RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV+ PN+
Sbjct: 496 AAYTKDFASKDSKKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVETKRPNI 555
Query: 660 LEFNFLGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGL 719
L+F+FLGKDSIRY+N VEVE VF AI QF+SGK G DDLFD+LDT+KLNAHLK+LMPGL
Sbjct: 556 LKFDFLGKDSIRYQNEVEVEPRVFSAIEQFRSGKEGGDDLFDQLDTSKLNAHLKELMPGL 615
Query: 720 TAKVFRTYNASITLDDM-----LNRGTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSH 779
TAKVFRTYNASITLD+M L+R TK GDV+EK+V YQHANKEVAIICNHQRTVSKSH
Sbjct: 616 TAKVFRTYNASITLDEMVRCKLLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSH 675
Query: 780 GAQMTRLNEKISELRDILKELKIDLDRAKKGKPPLKGSDGKQKRNLTPE----------- 839
AQM RLNEKI EL+ +LKEL+ DL R KGKPPLK SDGK KRNL +
Sbjct: 676 SAQMVRLNEKIEELKGLLKELQEDLTRVNKGKPPLKNSDGKPKRNLNLKRYKGKLLKLIQ 735
Query: 840 -----------ALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWCK 884
++ KKI+QTN KIEK+ERD +TKEDLKTVALGTSKINYLDPRITVAWCK
Sbjct: 736 KLRKWSETRRLSVTKKIAQTNTKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCK 790
BLAST of PI0013838 vs. ExPASy Swiss-Prot
Match:
Q54RC3 (DNA topoisomerase 1 OS=Dictyostelium discoideum OX=44689 GN=top1 PE=3 SV=1)
HSP 1 Score: 516.5 bits (1329), Expect = 5.8e-145
Identity = 344/880 (39.09%), Postives = 483/880 (54.89%), Query Frame = 0
Query: 70 KRMTSLPKTSPMRSE-IGSQKASKSSPIQEPLTKSLGTSLKASDSMDSRPKNLVNAAVKE 129
K++T PK +P+ + + K P ++P+ S SDS DS + +++ +
Sbjct: 59 KKLTPTPKPAPVTPKPTAAVNGKKPIPKKKPVDSS-----SDSDSSDSSSDSDSDSSDSD 118
Query: 130 ENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKSSGDSDDEVPLSSK 189
+ S S ++S S+ D P + N+P+ G VS SKN K ++ + + SK
Sbjct: 119 SDSS---SSDSSSSDSDVPKKKPISKIPNKPS-GTVSKTSKNSPKTTTTTTTTTTTVKSK 178
Query: 190 FQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPNADSHSPSQ 249
PKV S+S D + SS DS S S
Sbjct: 179 ----------------------PAPKVKPEQSSSDDSSSDSSDDSSD------DSSSDSS 238
Query: 250 FSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSSSSKPAVSK 309
+KPK S P + K + K+E P+ + +++ T ++
Sbjct: 239 SEEEKPKKKPSKKPAAVK-KEITVKKETTTTTKKTPVKKEVEVKKETKTTTTKKVKKEES 298
Query: 310 VVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQK-------------KWTTLVHNGV 369
+KT K K +K K + + +G KWTTL+HNG
Sbjct: 299 DDDGEDEKTTTKKKTTTRKRKLKEEEEGEEEEEEGVNKWWDKEDDEDDGTKWTTLIHNGP 358
Query: 370 IFPPPYQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLL- 429
+FPP Y HG+K +Y GK V LTP+QEEVAT +A +TD++ K FK+NF+ +++ LL
Sbjct: 359 VFPPAYVPHGIKFMYDGKVVKLTPKQEEVATFYANYLETDHVKKQAFKDNFFKEFKGLLT 418
Query: 430 -GKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVK 489
+ +++ +D CDF+ I+ + +KE++K + EEK EK K +EK+ +A +DG K
Sbjct: 419 SEQKEIVKKMDKCDFSHIHTHLKTKKEQRKARSKEEKDAETAEKKKIQEKHGFATIDGFK 478
Query: 490 EKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRH 549
EKVGN+ +EPPGLF GRG+HPK G LK+RI PSD+T+NIG+G IP PIPGE+WKE+ H
Sbjct: 479 EKVGNYMIEPPGLFLGRGQHPKTGMLKQRIMPSDVTLNIGEGEVIPPSPIPGEKWKEIVH 538
Query: 550 DNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK------VNAYTKDF 609
+NTVTWLAFW + +N FKYV+LA SS +KGQ+D++K+E AR LK Y K F
Sbjct: 539 NNTVTWLAFWRESVN-GGFKYVWLAPSSKIKGQADRKKFEVARGLKNCIGDIRKGYQKSF 598
Query: 610 TSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLG 669
+ +RQ+AVA YLID LALR GNEK +D+ADTVGCC+L+VE++K N + +FLG
Sbjct: 599 NDESTEKRQLAVALYLIDFLALRVGNEKGEDQADTVGCCSLRVEHIKLESNNTITLDFLG 658
Query: 670 KDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRT 729
KDS+RY NTV++ +K + F GK TD LFD L +LN HLK M GL+AKVFRT
Sbjct: 659 KDSMRYLNTVQIREDAYKVLKTFVKGKKPTDLLFDSLTVTQLNNHLKKQMTGLSAKVFRT 718
Query: 730 YNASITLDDMLNR-GTKD-GDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEK 789
YNASITL L++ TK+ + EKI+ Y N+EVAI+CNHQ+ K+ M++++EK
Sbjct: 719 YNASITLQKELDKMDTKEFQSIDEKILFYNRCNREVAILCNHQKAPPKNLAETMSKIDEK 778
Query: 790 ISELRDILKELKIDLDRAKKGKPPLKGSDG-----------------KQKRNLTPEALEK 849
I ELRD+ DL R K GK P + K++ E +K
Sbjct: 779 IQELRDLQ-----DLCRIKIGKTPKSQQEDIESREAERLPKLIQLAITNKKDKDKEKTDK 838
Query: 850 KIS------------------QTNAKIEKIERDMKT-------KEDLKTVALGTSKINYL 884
+IS + KI K E +K K++LKTVALGTSKINYL
Sbjct: 839 EISFDVKAAFEKSRTLPDAKGKIKEKIAKYEEQIKKQEILKTGKDELKTVALGTSKINYL 893
BLAST of PI0013838 vs. ExPASy Swiss-Prot
Match:
P07799 (DNA topoisomerase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=top1 PE=1 SV=2)
HSP 1 Score: 513.5 bits (1321), Expect = 4.9e-144
Identity = 337/840 (40.12%), Postives = 465/840 (55.36%), Query Frame = 0
Query: 129 ENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKSSGDSDDEVPLSSK 188
+ +S+K S E SDS ++ PLS S NK KS D DD +P+ +
Sbjct: 23 KRISMKESDEESDSSENHPLS-----------------ESLNKKSKSESDEDD-IPIRKR 82
Query: 189 FQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPNADSHSPSQ 248
SK++ + KV NG K K AV+ + SP
Sbjct: 83 --------RASSKKNMSNSSSKKRAKVMGNGGLKNGK--KTAVVKEEEDFNEIAKPSPKH 142
Query: 249 FSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSSSSKPAVSK 308
K S + + + K+E D DD +P+ + + VS T KS A
Sbjct: 143 KRVSKANGSKNGAKSA-------VKKEESDTDDSVPL-RAVSTVSLTPYKSELPSGA--- 202
Query: 309 VVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPPYQ--THGV 368
S++ ++ + + K+ S + D +KWTTL HNGVIF PPY+ V
Sbjct: 203 --STTQNRSPNDEEDEDEDYKWWTSENI-----DDTQKWTTLEHNGVIFAPPYEPLPKNV 262
Query: 369 KMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGK---NHVIQNL 428
K++Y G PV+L P+ EEVA +A M +TD+ P F++NF+ D+ K+ + NH I+
Sbjct: 263 KLIYDGNPVNLPPEAEEVAGFYAAMLETDHAKNPVFQDNFFRDFLKVCDECNFNHNIKEF 322
Query: 429 DDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFRVEP 488
CDFT ++ ++ ++E+KK M E+KK +K++K ++EEKY W ILDG KEKVGNFR+EP
Sbjct: 323 SKCDFTQMFHHFEQKREEKKSMPKEQKKAIKQKKDEEEEKYKWCILDGRKEKVGNFRIEP 382
Query: 489 PGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWLAFW 548
PGLFRGRG HPK G LKRR+ P ITINIG+G P+PE P+PG +W EV+HDNTVTWLA W
Sbjct: 383 PGLFRGRGSHPKTGSLKRRVYPEQITINIGEGVPVPE-PLPGHQWAEVKHDNTVTWLATW 442
Query: 549 NDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK------VNAYTKDFTSKDPTRRQI 608
++ IN KYVFLAA SSLKGQSD +KYEK+R LK Y KD S+ RQ
Sbjct: 443 HENIN-NNVKYVFLAAGSSLKGQSDLKKYEKSRKLKDYIDDIRKGYRKDLKSELTVERQR 502
Query: 609 AVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYENTV 668
A YLID ALRAGNEK +DEADTVGCC+L+ E+V PP + F+FLGKDSIRY N V
Sbjct: 503 GTAMYLIDVFALRAGNEKGEDEADTVGCCSLRYEHVTLKPPRTVVFDFLGKDSIRYYNEV 562
Query: 669 EVELPVFKAITQF-QSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITLDD 728
EV+ VFK + F + K D +FD+L TN LN +L LM GL+AKVFRTYNAS T+ +
Sbjct: 563 EVDPQVFKNLKIFKRPPKKEGDLIFDRLSTNSLNKYLTSLMDGLSAKVFRTYNASYTMAE 622
Query: 729 MLNRGTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISEL---RDIL 788
L + K+ +++KI+ Y AN+ VAI+CNHQR+V+K+H QM R E+I L R L
Sbjct: 623 ELKKMPKNLTLADKILFYNRANRTVAILCNHQRSVTKNHDVQMERFAERIKALQYQRMRL 682
Query: 789 KELKIDLD-RAKKGKPP------------------------------------------- 848
+++ ++L+ + K KP
Sbjct: 683 RKMMLNLEPKLAKSKPELLAKEEGITDSWIVKHHETLYELEKEKIKKKFDRENEKLAAED 742
Query: 849 -------------LKGSDGKQK--------RNLTP-----EALEKKISQTNAKIEKIERD 884
LK +D +K + + P E LEK++++ N +I +
Sbjct: 743 PKSVLPESELEVRLKAADELKKALDAELKSKKVDPGRSSMEQLEKRLNKLNERINVMRTQ 802
BLAST of PI0013838 vs. ExPASy TrEMBL
Match:
A0A1S3BM72 (DNA topoisomerase I OS=Cucumis melo OX=3656 GN=LOC103491068 PE=3 SV=1)
HSP 1 Score: 1672.5 bits (4330), Expect = 0.0e+00
Identity = 863/889 (97.08%), Postives = 869/889 (97.75%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
Query: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMDSRPKN 120
TNGQSSNNQKRMTSLPKTSPMRSEIGSQKA KSSPIQEPLTKSLG SLKASDSMDSRPKN
Sbjct: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKAPKSSPIQEPLTKSLGISLKASDSMDSRPKN 120
Query: 121 LVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKSSGDSD 180
LVNAAVKEENVSI PSQENSDSEDDKPLSIRLKGNSNQPNKGLVST+ KNKVKKSSGDSD
Sbjct: 121 LVNAAVKEENVSINPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTIPKNKVKKSSGDSD 180
Query: 181 DEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
DEVPLSSKFQMK+ASG +GSKQ GFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN
Sbjct: 181 DEVPLSSKFQMKHASGPMGSKQLGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
Query: 241 ADSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSS 300
DSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDD IPISQR+K ATVNKSS
Sbjct: 241 EDSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDDIPISQRLKKTPATVNKSS 300
Query: 301 SSKPAVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
SSKP VSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP
Sbjct: 301 SSKPTVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKK LKEEKLKQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
Query: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK------VNAYTKDFTSKDPTR 600
AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKAR+LK NAYTKDFTSKDPTR
Sbjct: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIKNIRNAYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
DDMLNRGTKDG+VSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK
Sbjct: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 889
BLAST of PI0013838 vs. ExPASy TrEMBL
Match:
A0A5A7VHI9 (DNA topoisomerase I OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002170 PE=3 SV=1)
HSP 1 Score: 1661.4 bits (4301), Expect = 0.0e+00
Identity = 863/907 (95.15%), Postives = 869/907 (95.81%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
Query: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMDSRPKN 120
TNGQSSNNQKRMTSLPKTSPMRSEIGSQKA KSSPIQEPLTKSLG SLKASDSMDSRPKN
Sbjct: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKAPKSSPIQEPLTKSLGISLKASDSMDSRPKN 120
Query: 121 LVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKSSGDSD 180
LVNAAVKEENVSI PSQENSDSEDDKPLSIRLKGNSNQPNKGLVST+ KNKVKKSSGDSD
Sbjct: 121 LVNAAVKEENVSINPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTIPKNKVKKSSGDSD 180
Query: 181 DEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
DEVPLSSKFQMK+ASG +GSKQ GFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN
Sbjct: 181 DEVPLSSKFQMKHASGPMGSKQLGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
Query: 241 ADSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSS 300
DSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDD IPISQR+K ATVNKSS
Sbjct: 241 EDSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDDIPISQRLKKTPATVNKSS 300
Query: 301 SSKPAVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
SSKP VSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP
Sbjct: 301 SSKPTVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKK LKEEKLKQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
Query: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK------VNAYTKDFTSKDPTR 600
AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKAR+LK NAYTKDFTSKDPTR
Sbjct: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIKNIRNAYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
DDMLNRGTKDG+VSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK
Sbjct: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEK------------------IFNKSLLAKFAWAMD 884
LGTSKINYLDPRITVAWCKRHEVPIEK IFNKSLLAKFAWAMD
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKFKNFLLIFVIHNHNLLPQIFNKSLLAKFAWAMD 900
BLAST of PI0013838 vs. ExPASy TrEMBL
Match:
A0A0A0L2W2 (DNA topoisomerase I OS=Cucumis sativus OX=3659 GN=Csa_3G063680 PE=3 SV=1)
HSP 1 Score: 1656.3 bits (4288), Expect = 0.0e+00
Identity = 854/889 (96.06%), Postives = 866/889 (97.41%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
MAVETFGKAPMFDDDDEDNMPIVFKR+SASRQNQLDSEIKHSQAQRL+KLPGRQGSDLCS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRTSASRQNQLDSEIKHSQAQRLSKLPGRQGSDLCS 60
Query: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMDSRPKN 120
TNGQSSNNQKRMTSLPKTSPMRSEIGSQKAS+SSPI EPLTKSLGTSLKAS SMDSRPK+
Sbjct: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKASRSSPIPEPLTKSLGTSLKASHSMDSRPKS 120
Query: 121 LVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKSSGDSD 180
LVNA VKEENVSI PSQENSDSEDDKPLSIRLKGN NQPNKGLVSTV KNKVKKS DSD
Sbjct: 121 LVNAVVKEENVSINPSQENSDSEDDKPLSIRLKGNPNQPNKGLVSTVPKNKVKKSLADSD 180
Query: 181 DEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
DEVPLSSKFQMK+ASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN
Sbjct: 181 DEVPLSSKFQMKHASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
Query: 241 ADSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSS 300
DSHSPSQF TKKPKL+DSSSPL+SKLVSLKAKQEVDDDDD IPISQRMK VSATVNKSS
Sbjct: 241 EDSHSPSQFPTKKPKLTDSSSPLNSKLVSLKAKQEVDDDDDDIPISQRMKKVSATVNKSS 300
Query: 301 SSKPAVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
SSKP +SKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP
Sbjct: 301 SSKPTISKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
YQTHGVKMLYKGKPVDLTP QEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKMLYKGKPVDLTPPQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKK +KEEKLKQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKAVKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLKRRI PSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKRRICPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
Query: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK------VNAYTKDFTSKDPTR 600
AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK NAYTKDFTSKDPTR
Sbjct: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNAYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSGTDDLFDKLDT+KLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
DDMLNRGTK+G+VSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK
Sbjct: 721 DDMLNRGTKNGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 889
BLAST of PI0013838 vs. ExPASy TrEMBL
Match:
A0A6J1KZE0 (DNA topoisomerase I OS=Cucurbita maxima OX=3661 GN=LOC111500229 PE=3 SV=1)
HSP 1 Score: 1577.0 bits (4082), Expect = 0.0e+00
Identity = 818/889 (92.01%), Postives = 843/889 (94.83%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
MAVETFGKA MFDDDDEDNMPIVFKRSSASRQNQL+SE+KHSQ+QRLN+L GR GSD CS
Sbjct: 1 MAVETFGKATMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMDSRPKN 120
TNGQSSN QKRMTSLPKTSPMR EIGSQKASKSS IQEPL KSLGT+LK SDSMDSRPK
Sbjct: 61 TNGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSS-IQEPLVKSLGTTLKVSDSMDSRPKQ 120
Query: 121 LVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKSSGDSD 180
LVNAAVKEEN SI P+QENSDSEDDKPLSIRLKGNSN P+KG + TV KNK+KKSS DSD
Sbjct: 121 LVNAAVKEENDSIHPAQENSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSD 180
Query: 181 DEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
DEVPLSSKF+MK ASGVLG KQHGFDEKKPL KVHQNGSTS DKLQKPAV+SSKRPLPN
Sbjct: 181 DEVPLSSKFRMKSASGVLGGKQHGFDEKKPLDSKVHQNGSTSSDKLQKPAVVSSKRPLPN 240
Query: 241 ADSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSS 300
ADSHS SQ S+KKPKLSDSS+PLS+ VSLKAKQEV DDDDHIPISQRMKM SA VNKSS
Sbjct: 241 ADSHSSSQISSKKPKLSDSSTPLSTHTVSLKAKQEVVDDDDHIPISQRMKM-SAAVNKSS 300
Query: 301 SSKPAVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
SK VSKV SSSIKKT KKSKKPVKKSKYVKSTKLLPS+GDGQKKWTTLVHNGVIFPPP
Sbjct: 301 GSKKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
YQTHGVK+L+KGKPVDLTP+QEEVATMFAVMKDTDYM KPKFKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQ EKEKKKQMTTEEKK LKEEKLKQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLK+RIRPSDITINIGK APIPECPIPG+RWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWL 540
Query: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK------VNAYTKDFTSKDPTR 600
AFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEKARMLK N+YTKDFTSKDPTR
Sbjct: 541 AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSI+YE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSG+DDLFDKLDT+KLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
DDMLNRGTKDG+VSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK
Sbjct: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
BLAST of PI0013838 vs. ExPASy TrEMBL
Match:
A0A6J1EWI0 (DNA topoisomerase I OS=Cucurbita moschata OX=3662 GN=LOC111438616 PE=3 SV=1)
HSP 1 Score: 1573.9 bits (4074), Expect = 0.0e+00
Identity = 816/889 (91.79%), Postives = 841/889 (94.60%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQL+SE+KHSQ+QRLN+L GR GSD CS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMDSRPKN 120
NGQSSN QKRMTSLPKTSPMR EIGSQKA+KSS IQEPL KSLGT+LK SDSMDSRPK
Sbjct: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKAAKSS-IQEPLVKSLGTTLKVSDSMDSRPKQ 120
Query: 121 LVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKSSGDSD 180
L NAAVKEEN SI P+QENSDSEDDKPLSIRLKGNSN P+KG + TV KNK+KKSS DSD
Sbjct: 121 LANAAVKEENDSIHPTQENSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSD 180
Query: 181 DEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
DEVPLSSKFQMK ASGVLG KQHGF EKKPL KVHQNGSTSRDKLQKPAV+SSKRPLPN
Sbjct: 181 DEVPLSSKFQMKSASGVLGGKQHGFHEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPN 240
Query: 241 ADSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSS 300
ADSHS SQ S+KKPKLSDSS+PLS+ VSLKAKQEV DDDDHIPISQRMKM SA VNKSS
Sbjct: 241 ADSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVVDDDDHIPISQRMKM-SAAVNKSS 300
Query: 301 SSKPAVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
SK VSKV SSSIKKT KKSKKPVKKSKYVKSTKLLPS+GDGQKKWTTLVHNGVIFPPP
Sbjct: 301 GSKKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
YQTHGVK+L+KGKPVDLT +QEEVATMFAVMKDTDYM KPKFKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKILHKGKPVDLTTEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQ EKEKKKQMTTEEKK LKEEKLKQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLK+RIRPSDITINIGK APIPECPIPG+RWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWL 540
Query: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK------VNAYTKDFTSKDPTR 600
AFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEKARMLK N+YTKDFTSKDPTR
Sbjct: 541 AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSI+YE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSG+DDLFDKLDT+KLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
DDMLNRGTKDG+VSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK
Sbjct: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
BLAST of PI0013838 vs. NCBI nr
Match:
XP_008449103.1 (PREDICTED: DNA topoisomerase 1-like [Cucumis melo] >XP_008449104.1 PREDICTED: DNA topoisomerase 1-like [Cucumis melo])
HSP 1 Score: 1672.5 bits (4330), Expect = 0.0e+00
Identity = 863/889 (97.08%), Postives = 869/889 (97.75%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
Query: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMDSRPKN 120
TNGQSSNNQKRMTSLPKTSPMRSEIGSQKA KSSPIQEPLTKSLG SLKASDSMDSRPKN
Sbjct: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKAPKSSPIQEPLTKSLGISLKASDSMDSRPKN 120
Query: 121 LVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKSSGDSD 180
LVNAAVKEENVSI PSQENSDSEDDKPLSIRLKGNSNQPNKGLVST+ KNKVKKSSGDSD
Sbjct: 121 LVNAAVKEENVSINPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTIPKNKVKKSSGDSD 180
Query: 181 DEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
DEVPLSSKFQMK+ASG +GSKQ GFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN
Sbjct: 181 DEVPLSSKFQMKHASGPMGSKQLGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
Query: 241 ADSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSS 300
DSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDD IPISQR+K ATVNKSS
Sbjct: 241 EDSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDDIPISQRLKKTPATVNKSS 300
Query: 301 SSKPAVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
SSKP VSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP
Sbjct: 301 SSKPTVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKK LKEEKLKQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
Query: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK------VNAYTKDFTSKDPTR 600
AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKAR+LK NAYTKDFTSKDPTR
Sbjct: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIKNIRNAYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
DDMLNRGTKDG+VSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK
Sbjct: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 889
BLAST of PI0013838 vs. NCBI nr
Match:
KAA0065816.1 (DNA topoisomerase 1-like [Cucumis melo var. makuwa] >TYJ96555.1 DNA topoisomerase 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 1661.4 bits (4301), Expect = 0.0e+00
Identity = 863/907 (95.15%), Postives = 869/907 (95.81%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
Query: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMDSRPKN 120
TNGQSSNNQKRMTSLPKTSPMRSEIGSQKA KSSPIQEPLTKSLG SLKASDSMDSRPKN
Sbjct: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKAPKSSPIQEPLTKSLGISLKASDSMDSRPKN 120
Query: 121 LVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKSSGDSD 180
LVNAAVKEENVSI PSQENSDSEDDKPLSIRLKGNSNQPNKGLVST+ KNKVKKSSGDSD
Sbjct: 121 LVNAAVKEENVSINPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTIPKNKVKKSSGDSD 180
Query: 181 DEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
DEVPLSSKFQMK+ASG +GSKQ GFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN
Sbjct: 181 DEVPLSSKFQMKHASGPMGSKQLGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
Query: 241 ADSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSS 300
DSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDD IPISQR+K ATVNKSS
Sbjct: 241 EDSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDDIPISQRLKKTPATVNKSS 300
Query: 301 SSKPAVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
SSKP VSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP
Sbjct: 301 SSKPTVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKK LKEEKLKQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
Query: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK------VNAYTKDFTSKDPTR 600
AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKAR+LK NAYTKDFTSKDPTR
Sbjct: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIKNIRNAYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
DDMLNRGTKDG+VSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK
Sbjct: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEK------------------IFNKSLLAKFAWAMD 884
LGTSKINYLDPRITVAWCKRHEVPIEK IFNKSLLAKFAWAMD
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKFKNFLLIFVIHNHNLLPQIFNKSLLAKFAWAMD 900
BLAST of PI0013838 vs. NCBI nr
Match:
XP_004149585.1 (DNA topoisomerase 1 alpha [Cucumis sativus] >XP_011650506.1 DNA topoisomerase 1 alpha [Cucumis sativus] >KGN56068.1 hypothetical protein Csa_010762 [Cucumis sativus])
HSP 1 Score: 1656.3 bits (4288), Expect = 0.0e+00
Identity = 854/889 (96.06%), Postives = 866/889 (97.41%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
MAVETFGKAPMFDDDDEDNMPIVFKR+SASRQNQLDSEIKHSQAQRL+KLPGRQGSDLCS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRTSASRQNQLDSEIKHSQAQRLSKLPGRQGSDLCS 60
Query: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMDSRPKN 120
TNGQSSNNQKRMTSLPKTSPMRSEIGSQKAS+SSPI EPLTKSLGTSLKAS SMDSRPK+
Sbjct: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKASRSSPIPEPLTKSLGTSLKASHSMDSRPKS 120
Query: 121 LVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKSSGDSD 180
LVNA VKEENVSI PSQENSDSEDDKPLSIRLKGN NQPNKGLVSTV KNKVKKS DSD
Sbjct: 121 LVNAVVKEENVSINPSQENSDSEDDKPLSIRLKGNPNQPNKGLVSTVPKNKVKKSLADSD 180
Query: 181 DEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
DEVPLSSKFQMK+ASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN
Sbjct: 181 DEVPLSSKFQMKHASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
Query: 241 ADSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSS 300
DSHSPSQF TKKPKL+DSSSPL+SKLVSLKAKQEVDDDDD IPISQRMK VSATVNKSS
Sbjct: 241 EDSHSPSQFPTKKPKLTDSSSPLNSKLVSLKAKQEVDDDDDDIPISQRMKKVSATVNKSS 300
Query: 301 SSKPAVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
SSKP +SKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP
Sbjct: 301 SSKPTISKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
YQTHGVKMLYKGKPVDLTP QEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKMLYKGKPVDLTPPQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKK +KEEKLKQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKAVKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLKRRI PSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKRRICPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
Query: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK------VNAYTKDFTSKDPTR 600
AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK NAYTKDFTSKDPTR
Sbjct: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNAYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSGTDDLFDKLDT+KLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
DDMLNRGTK+G+VSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK
Sbjct: 721 DDMLNRGTKNGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 889
BLAST of PI0013838 vs. NCBI nr
Match:
XP_038904656.1 (DNA topoisomerase 1 alpha-like isoform X1 [Benincasa hispida] >XP_038904657.1 DNA topoisomerase 1 alpha-like isoform X1 [Benincasa hispida])
HSP 1 Score: 1605.9 bits (4157), Expect = 0.0e+00
Identity = 833/890 (93.60%), Postives = 853/890 (95.84%), Query Frame = 0
Query: 1 MAVETFGKAPMF-DDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLC 60
MAVETFGKAPMF DDDDEDNMPIVFKRSSASRQNQLDSEIKHSQ+QRLNKL GRQGSD+C
Sbjct: 1 MAVETFGKAPMFDDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQSQRLNKLSGRQGSDIC 60
Query: 61 STNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMDSRPK 120
STNGQSSNNQKRMTSLPKTSPMRSEIGSQKASK SPI+EP K LGTSLK SDSMDSR K
Sbjct: 61 STNGQSSNNQKRMTSLPKTSPMRSEIGSQKASK-SPIREPPVKPLGTSLKVSDSMDSRSK 120
Query: 121 NLVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKSSGDS 180
LVN AVK+ENVSI +QENSDSEDDKPLSIRLKGNS+QPNKGLV TV KNKVKKSSGDS
Sbjct: 121 PLVNTAVKKENVSIILTQENSDSEDDKPLSIRLKGNSSQPNKGLVPTVPKNKVKKSSGDS 180
Query: 181 DDEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLP 240
DDE+PLSSKFQMK SGVLGSKQHGFDEKKPLVP+VHQNGSTSRDKLQKPAVLSSKRPLP
Sbjct: 181 DDEIPLSSKFQMKSGSGVLGSKQHGFDEKKPLVPRVHQNGSTSRDKLQKPAVLSSKRPLP 240
Query: 241 NADSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKS 300
NADSH+PSQ STKKPKLSDSS+PLSSKLVSLKAKQEVDD+DD IPISQRMK +SA VNKS
Sbjct: 241 NADSHTPSQISTKKPKLSDSSTPLSSKLVSLKAKQEVDDEDDDIPISQRMKKMSAPVNKS 300
Query: 301 SSSKPAVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPP 360
SSSK VSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPP
Sbjct: 301 SSSKQTVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPP 360
Query: 361 PYQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHV 420
PYQTHGVK+LYKGKPVDLTP+QEEVATMFAVMKDT+YMLKPKFKENFWNDWRKLLGKNHV
Sbjct: 361 PYQTHGVKILYKGKPVDLTPEQEEVATMFAVMKDTEYMLKPKFKENFWNDWRKLLGKNHV 420
Query: 421 IQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNF 480
IQNLDDCDFTPIYDWYQ EKEKKKQMTTEEKK LKEEKLKQEEKYMWAILDGVKEKVGNF
Sbjct: 421 IQNLDDCDFTPIYDWYQKEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNF 480
Query: 481 RVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTW 540
RVEPPGLFRGRGEHPKMGKLKRRI PSDITINIGKGAPIPECPIPGERWKEVRHDNTVTW
Sbjct: 481 RVEPPGLFRGRGEHPKMGKLKRRIHPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTW 540
Query: 541 LAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK------VNAYTKDFTSKDPT 600
LAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK NAYTKDFTSKD T
Sbjct: 541 LAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNAYTKDFTSKDST 600
Query: 601 RRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRY 660
RRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVK VPPNLLEFNFLGKDSI+Y
Sbjct: 601 RRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKVVPPNLLEFNFLGKDSIKY 660
Query: 661 ENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASIT 720
ENTVEVELPVFKAITQFQSGKSGTDDLFDKLDT+KLNAHLKDLMPGLTAKVFRTYNASIT
Sbjct: 661 ENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASIT 720
Query: 721 LDDMLNRGTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIL 780
LDDMLNRGTKDGDV EKI TYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDI+
Sbjct: 721 LDDMLNRGTKDGDVVEKIATYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIV 780
Query: 781 KELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTV 840
KELKIDLDRAKKGKPPLK +DGK+KRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTV
Sbjct: 781 KELKIDLDRAKKGKPPLKDADGKRKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTV 840
Query: 841 ALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
ALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 ALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 889
BLAST of PI0013838 vs. NCBI nr
Match:
XP_023553297.1 (DNA topoisomerase 1 beta-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1577.8 bits (4084), Expect = 0.0e+00
Identity = 816/889 (91.79%), Postives = 843/889 (94.83%), Query Frame = 0
Query: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQL+SE+KHSQ+QRLN+L GR GSD CS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 TNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMDSRPKN 120
NGQSSN QKRMTSLPKTSPMR EIGSQKASKSS IQEPL KSLGT+LK SDSMDSRPK
Sbjct: 61 ANGQSSNAQKRMTSLPKTSPMRPEIGSQKASKSS-IQEPLVKSLGTTLKVSDSMDSRPKQ 120
Query: 121 LVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKSSGDSD 180
L NAAVKEEN SI P+Q+NSDSEDDKPLSIRLKGNSN P+KG + TV KNK+KKSS DSD
Sbjct: 121 LANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSD 180
Query: 181 DEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPN 240
DEVPLSSKFQMK ASGVLG +QHGFDEKKPL KVHQNGSTSRDKLQKPAV+SSKRPLPN
Sbjct: 181 DEVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPN 240
Query: 241 ADSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSS 300
ADSHS SQ S+KKPKLSDSS+PLS+ VSLKAKQEV DDDDHIPISQRMKM SA VNKSS
Sbjct: 241 ADSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRMKM-SAAVNKSS 300
Query: 301 SSKPAVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPP 360
SK VSKV SSSIKKT KKSKKPVKKSKYVKSTKLLPS+GDGQKKWTTLVHNGVIFPPP
Sbjct: 301 GSKKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVI 420
YQTHGVK+L+KGKPVDLTP+QEEVATMFAVMKDTDYM KPKFKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQ EKEKKKQMTTEEKK LKEEKLKQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLK+RIRPSDITINIGK APIPECPIPG+RWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWL 540
Query: 541 AFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLK------VNAYTKDFTSKDPTR 600
AFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEKARMLK N+YTKDFTSKDPTR
Sbjct: 541 AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSI+YE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSG+DDLFDKLDT+KLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
DDMLNRGTKDG+VSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDI+K
Sbjct: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVK 780
Query: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
BLAST of PI0013838 vs. TAIR 10
Match:
AT5G55300.1 (DNA topoisomerase I alpha )
HSP 1 Score: 1013.4 bits (2619), Expect = 1.1e-295
Identity = 574/943 (60.87%), Postives = 687/943 (72.85%), Query Frame = 0
Query: 1 MAVETFGKAPMFDD---DDEDNMPIVFKRSS--ASRQNQLDSEIKHSQAQRLNKLPGRQG 60
M ET K P+ D+ D +D+ P+ FKR++ AS NQ S + S+A K+ +
Sbjct: 1 MGTETVSK-PVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPMR- 60
Query: 61 SDLCSTNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMD 120
S + S NG + +N KTS ++S + S +SK+SP + PL + +++K +
Sbjct: 61 SPVTSPNGTTPSN--------KTSIVKSSMPS-SSSKASPAKSPLRNDMPSTVKDRSQLQ 120
Query: 121 SRPKNLVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKS 180
K+++ + E+ DSEDD+PLS L GN + VS S KK+
Sbjct: 121 -----------KDQS---ECKIEHEDSEDDRPLSSILSGNKGPTSSRQVS--SPQPEKKN 180
Query: 181 SGD-------------SDDEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTS 240
+GD SDDE P+SS F+ K SG+ G Q DEKKPLV K+HQNGST
Sbjct: 181 NGDRPLDRASRIIKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTV 240
Query: 241 RDKLQKPAVLSSKRPLPNADSHSPSQFSTKKPKLSDSSSPLSSK--------------LV 300
++++ VL KRPL + S Q S KK K+S S + + K LV
Sbjct: 241 KNEVPNGKVL-GKRPLEK--NSSADQSSLKKAKISASPTSVKMKQDSVKKEIDDKGRVLV 300
Query: 301 S--LKAKQ-------EVDDDDDHIPISQRMKMVSATVN-------------KSSSSKPAV 360
S +KAKQ DDDDD +PIS+R K S+ N SS++KP
Sbjct: 301 SPKMKAKQLSTREDGTDDDDDDDVPISKRFKSDSSNSNTSSAKPKAVKLNSTSSAAKPKA 360
Query: 361 SKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPPYQTHGV 420
VVS + K +KK K SKY S+K PS+GDGQKKWTTLVHNGVIFPPPY+ HG+
Sbjct: 361 RNVVSPRSRAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWTTLVHNGVIFPPPYKPHGI 420
Query: 421 KMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVIQNLDDC 480
K+LYKGKPVDLT +QEEVATMFAVM++TDY KP+F+ENFWNDWR+LLGK HVIQ LDDC
Sbjct: 421 KILYKGKPVDLTIEQEEVATMFAVMRETDYYTKPQFRENFWNDWRRLLGKKHVIQKLDDC 480
Query: 481 DFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGL 540
DFTPIY+W+ EKEKKKQM+TEEKK LKEEK+KQEEKYMWA++DGVKEK+GNFRVEPPGL
Sbjct: 481 DFTPIYEWHLEEKEKKKQMSTEEKKALKEEKMKQEEKYMWAVVDGVKEKIGNFRVEPPGL 540
Query: 541 FRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDP 600
FRGRGEHPKMGKLK+RI P +IT+NIGKGAPIPECPI GERWKEV+HDNTVTWLAFW DP
Sbjct: 541 FRGRGEHPKMGKLKKRIHPCEITLNIGKGAPIPECPIAGERWKEVKHDNTVTWLAFWADP 600
Query: 601 INQKEFKYVFLAASSSLKGQSDKEKYEKARMLKVN------AYTKDFTSKDPTRRQIAVA 660
IN KEFKYVFL A SSLKG SDKEKYEKAR L + YTK+FT+KD RQIAVA
Sbjct: 601 INPKEFKYVFLGAGSSLKGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVA 660
Query: 661 TYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYENTVEVE 720
TYLIDKLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN ++F+FLGKDSI+Y NTVEVE
Sbjct: 661 TYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVE 720
Query: 721 LPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNR 780
V+KAI QFQ+GKS TDDLFD+LDT+KLNAHLK+L+PGLTAKVFRTYNASITLD+ML++
Sbjct: 721 PLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQ 780
Query: 781 GTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKELKIDL 840
TKDGDV++KIV YQ ANKEVAIICNHQRTVSK+HGAQ+ +L +I EL+++LKELK +L
Sbjct: 781 ETKDGDVTQKIVVYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNL 840
Query: 841 DRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKI 884
DRAKKGKPPL+GSDGK+ R+L P A EKKI+Q +AKIEK+ERDM TKEDLKTVALGTSKI
Sbjct: 841 DRAKKGKPPLEGSDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKI 900
BLAST of PI0013838 vs. TAIR 10
Match:
AT5G55310.1 (DNA topoisomerase 1 beta )
HSP 1 Score: 1011.1 bits (2613), Expect = 5.3e-295
Identity = 579/942 (61.46%), Postives = 685/942 (72.72%), Query Frame = 0
Query: 1 MAVETFGKAPM------FDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQ 60
MA E F K + ++D+DED++P+VFKR+S + A N+ P
Sbjct: 1 MATEAFVKPVVPNGHDGYEDEDEDDIPLVFKRNS-------------NTAATTNR-PSPI 60
Query: 61 GSDLCSTNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSM 120
+ + ++ S+ + M S P TSP RS S ++S P P + S+ S S
Sbjct: 61 NNAMRNSAIGSTKSSPPMRS-PLTSPNRSASSSTRSSMMKPAL-PSSSSVQRSTLKSPLR 120
Query: 121 DSRPKNLVNAAVKEENVSIK-PS---QENSDSEDDKPLSIRLKGNSNQPNK-----GLVS 180
D R + KE N K PS ++ DSEDDKPLS RLK +S + K G S
Sbjct: 121 DDR-----SVVAKERNGFGKAPSVSKSDDEDSEDDKPLSARLKLDSKEVTKQPSSSGRGS 180
Query: 181 T---VSKNKVKKSSGDS-------DDEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKV 240
T V K+ ++ D+ P+SS Q K + G SK ++K+PLV +
Sbjct: 181 TQQAVQKSNMRPQGLSDYTKKKVLDERAPMSSTVQTKTSVGTSSSKPVHIEQKRPLVNNI 240
Query: 241 HQNG---STSRDKLQKPAVLSSKRPLPNADSHSPSQFSTKKPKLS--------------- 300
+NG T Q PA KRPL S +Q S K+PKLS
Sbjct: 241 DRNGLKPKTEGHSSQAPA----KRPLEKGS--SSNQSSVKRPKLSEPARPVKVEQGSHIS 300
Query: 301 ----------DSSSPLSSKLVSLKAKQEVDDDDDHIPISQRMKMVSATVNKSSSSKPAVS 360
D+S PL + ++ K++ D DDH+PI+ RMK S+ NKSSS+KP+ S
Sbjct: 301 ATQDAKGKNLDASKPLRANQATV--KEDNSDGDDHVPIASRMKSDSSN-NKSSSAKPSSS 360
Query: 361 KVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPPYQTHGVK 420
K+++SS + +K K VK SKY KS+K LPS GDGQKKW TL HNGVIFPPPY+ HGVK
Sbjct: 361 KMIASSSRTIAQKPNKWVKDSKYSKSSKSLPS-GDGQKKWKTLQHNGVIFPPPYKRHGVK 420
Query: 421 MLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVIQNLDDCD 480
+L++GKPVDLTP+QEEVATMFAVM++T+Y KPKF+ENFWNDWRKLLGKNH+I++LDDCD
Sbjct: 421 ILFQGKPVDLTPEQEEVATMFAVMRETEYYKKPKFRENFWNDWRKLLGKNHMIKSLDDCD 480
Query: 481 FTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGLF 540
FTPIY+WY EKE KKQMT EEK+ +KEEKLKQEEKYMWA+LDGV+E++GNFRVEPPGLF
Sbjct: 481 FTPIYEWYMQEKETKKQMTAEEKRIVKEEKLKQEEKYMWAVLDGVRERIGNFRVEPPGLF 540
Query: 541 RGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDPI 600
RGRGEHPKMGKLK+RIRP DITINIGK APIPECPIPGERWKEV+HDNTVTWLAFW+DPI
Sbjct: 541 RGRGEHPKMGKLKKRIRPCDITINIGKEAPIPECPIPGERWKEVKHDNTVTWLAFWSDPI 600
Query: 601 NQKEFKYVFLAASSSLKGQSDKEKYEKARMLKVN------AYTKDFTSKDPTRRQIAVAT 660
N KEFKYVFLAASSSLKGQSDKEKYEKAR L + AYTKDF +KD T+RQIAVAT
Sbjct: 601 NPKEFKYVFLAASSSLKGQSDKEKYEKARKLHNHIGSIRAAYTKDFNNKDVTKRQIAVAT 660
Query: 661 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYENTVEVEL 720
YLIDKLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN L+F+FLGKDSI+Y NTVEVE
Sbjct: 661 YLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEP 720
Query: 721 PVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRG 780
V+KAI QFQ+GKS TDDLFD+LDT+KLN HLK+LM GLTAKVFRTYNASITLD ML++
Sbjct: 721 LVYKAIGQFQAGKSKTDDLFDELDTSKLNTHLKELMAGLTAKVFRTYNASITLDLMLSKE 780
Query: 781 TKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKELKIDLD 840
T+DGDV EK+V YQ ANKEVAIICNHQRTVSKSHGAQ+ +L KI ELR+ +KEL IDLD
Sbjct: 781 TRDGDVPEKVVVYQQANKEVAIICNHQRTVSKSHGAQVEKLAVKIEELREQIKELNIDLD 840
Query: 841 RAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKIN 884
RAKKG+ PL GSDGK+KRNLTPEALEKKI QT KIEK+ERDM+TKED+KTVALGTSKIN
Sbjct: 841 RAKKGRTPLMGSDGKRKRNLTPEALEKKIMQTQGKIEKMERDMQTKEDMKTVALGTSKIN 900
BLAST of PI0013838 vs. TAIR 10
Match:
AT5G55300.2 (DNA topoisomerase I alpha )
HSP 1 Score: 1008.4 bits (2606), Expect = 3.4e-294
Identity = 572/940 (60.85%), Postives = 684/940 (72.77%), Query Frame = 0
Query: 1 MAVETFGKAPMFDD---DDEDNMPIVFKRSS--ASRQNQLDSEIKHSQAQRLNKLPGRQG 60
M ET K P+ D+ D +D+ P+ FKR++ AS NQ S + S+A K+ +
Sbjct: 1 MGTETVSK-PVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPMR- 60
Query: 61 SDLCSTNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMD 120
S + S NG + +N KTS ++S + S +SK+SP + PL + +++K +
Sbjct: 61 SPVTSPNGTTPSN--------KTSIVKSSMPS-SSSKASPAKSPLRNDMPSTVKDRSQLQ 120
Query: 121 SRPKNLVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKS 180
K+++ + E+ DSEDD+PLS L GN + VS S KK+
Sbjct: 121 -----------KDQS---ECKIEHEDSEDDRPLSSILSGNKGPTSSRQVS--SPQPEKKN 180
Query: 181 SGD-------------SDDEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTS 240
+GD SDDE P+SS F+ K SG+ G Q DEKKPLV K+HQNGST
Sbjct: 181 NGDRPLDRASRIIKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTV 240
Query: 241 RDKLQKPAVLSSKRPLPNADSHSPSQFSTKKPKLSDSSSPLSSK--------------LV 300
++++ VL KRPL + S Q S KK K+S S + + K LV
Sbjct: 241 KNEVPNGKVL-GKRPLEK--NSSADQSSLKKAKISASPTSVKMKQDSVKKEIDDKGRVLV 300
Query: 301 S--LKAKQ-------EVDDDDDHIPISQRMKMVSATVN-------------KSSSSKPAV 360
S +KAKQ DDDDD +PIS+R K S+ N SS++KP
Sbjct: 301 SPKMKAKQLSTREDGTDDDDDDDVPISKRFKSDSSNSNTSSAKPKAVKLNSTSSAAKPKA 360
Query: 361 SKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPPYQTHGV 420
VVS + K +KK K SKY S+K PS+GDGQKKWTTLVHNGVIFPPPY+ HG+
Sbjct: 361 RNVVSPRSRAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWTTLVHNGVIFPPPYKPHGI 420
Query: 421 KMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVIQNLDDC 480
K+LYKGKPVDLT +QEEVATMFAVM++TDY KP+F+ENFWNDWR+LLGK HVIQ LDDC
Sbjct: 421 KILYKGKPVDLTIEQEEVATMFAVMRETDYYTKPQFRENFWNDWRRLLGKKHVIQKLDDC 480
Query: 481 DFTPIYDWYQMEKEKKKQMTTEEKKTLKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGL 540
DFTPIY+W+ EKEKKKQM+TEEKK LKEEK+KQEEKYMWA++DGVKEK+GNFRVEPPGL
Sbjct: 481 DFTPIYEWHLEEKEKKKQMSTEEKKALKEEKMKQEEKYMWAVVDGVKEKIGNFRVEPPGL 540
Query: 541 FRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDP 600
FRGRGEHPKMGKLK+RI P +IT+NIGKGAPIPECPI GERWKEV+HDNTVTWLAFW DP
Sbjct: 541 FRGRGEHPKMGKLKKRIHPCEITLNIGKGAPIPECPIAGERWKEVKHDNTVTWLAFWADP 600
Query: 601 INQKEFKYVFLAASSSLKGQSDKEKYEKARMLKVN------AYTKDFTSKDPTRRQIAVA 660
IN KEFKYVFL A SSLKG SDKEKYEKAR L + YTK+FT+KD RQIAVA
Sbjct: 601 INPKEFKYVFLGAGSSLKGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVA 660
Query: 661 TYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYENTVEVE 720
TYLIDKLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN ++F+FLGKDSI+Y NTVEVE
Sbjct: 661 TYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVE 720
Query: 721 LPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNR 780
V+KAI QFQ+GKS TDDLFD+LDT+KLNAHLK+L+PGLTAKVFRTYNASITLD+ML++
Sbjct: 721 PLVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQ 780
Query: 781 GTKDGDVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKELKIDL 840
TKDGDV++KIV YQ ANKEVAIICNHQRTVSK+HGAQ+ +L +I EL+++LKELK +L
Sbjct: 781 ETKDGDVTQKIVVYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNL 840
Query: 841 DRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKI 881
DRAKKGKPPL+GSDGK+ R+L P A EKKI+Q +AKIEK+ERDM TKEDLKTVALGTSKI
Sbjct: 841 DRAKKGKPPLEGSDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKI 900
BLAST of PI0013838 vs. TAIR 10
Match:
AT5G55300.3 (DNA topoisomerase I alpha )
HSP 1 Score: 429.9 bits (1104), Expect = 5.1e-120
Identity = 210/271 (77.49%), Postives = 246/271 (90.77%), Query Frame = 0
Query: 613 NEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYENTVEVELPVFKAITQFQS 672
++ DDDEADTVGCCTLKV NV+ +PPN ++F+FLGKDSI+Y NTVEVE V+KAI QFQ+
Sbjct: 291 DDDDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVEPLVYKAIGQFQA 350
Query: 673 GKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKDGDVSEKIV 732
GKS TDDLFD+LDT+KLNAHLK+L+PGLTAKVFRTYNASITLD+ML++ TKDGDV++KIV
Sbjct: 351 GKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQETKDGDVTQKIV 410
Query: 733 TYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKELKIDLDRAKKGKPPLKG 792
YQ ANKEVAIICNHQRTVSK+HGAQ+ +L +I EL+++LKELK +LDRAKKGKPPL+G
Sbjct: 411 VYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNLDRAKKGKPPLEG 470
Query: 793 SDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWC 852
SDGK+ R+L P A EKKI+Q +AKIEK+ERDM TKEDLKTVALGTSKINYLDPRITVAWC
Sbjct: 471 SDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDPRITVAWC 530
Query: 853 KRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
KRHEVPIEKIF KSLL KFAWAMDV+P++RF
Sbjct: 531 KRHEVPIEKIFTKSLLEKFAWAMDVEPEYRF 561
HSP 2 Score: 99.8 bits (247), Expect = 1.2e-20
Identity = 108/308 (35.06%), Postives = 159/308 (51.62%), Query Frame = 0
Query: 1 MAVETFGKAPMFDD---DDEDNMPIVFKRSS--ASRQNQLDSEIKHSQAQRLNKLPGRQG 60
M ET K P+ D+ D +D+ P+ FKR++ AS NQ S + S+A K+ +
Sbjct: 1 MGTETVSK-PVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPMR- 60
Query: 61 SDLCSTNGQSSNNQKRMTSLPKTSPMRSEIGSQKASKSSPIQEPLTKSLGTSLKASDSMD 120
S + S NG + +N KTS ++S + S +SK+SP + PL + +++K +
Sbjct: 61 SPVTSPNGTTPSN--------KTSIVKSSMPS-SSSKASPAKSPLRNDMPSTVKDRSQLQ 120
Query: 121 SRPKNLVNAAVKEENVSIKPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTVSKNKVKKS 180
K+++ + E+ DSEDD+PLS L GN + VS S KK+
Sbjct: 121 -----------KDQS---ECKIEHEDSEDDRPLSSILSGNKGPTSSRQVS--SPQPEKKN 180
Query: 181 SGD-------------SDDEVPLSSKFQMKYASGVLGSKQHGFDEKKPLVPKVHQNGSTS 240
+GD SDDE P+SS F+ K SG+ G Q DEKKPLV K+HQNGST
Sbjct: 181 NGDRPLDRASRIIKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTV 240
Query: 241 RDKLQKPAVLSSKRPLPNADSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDH 291
++++ VL KRPL + S Q S KK K+ S+SP S K+ K+E+ DD
Sbjct: 241 KNEVPNGKVL-GKRPLEK--NSSADQSSLKKAKI--SASPTSVKMKQDSVKKEI-DDKGR 275
BLAST of PI0013838 vs. TAIR 10
Match:
AT4G26701.1 (DNA binding;DNA topoisomerase type Is )
HSP 1 Score: 129.0 bits (323), Expect = 1.8e-29
Identity = 60/68 (88.24%), Postives = 64/68 (94.12%), Query Frame = 0
Query: 816 KIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAM 875
KIEK+ERDM+TKEDLKTVALGTSKINY+DPRITVAWCKRHE PIEKIFNKSLL KFAWAM
Sbjct: 2 KIEKMERDMQTKEDLKTVALGTSKINYMDPRITVAWCKRHEAPIEKIFNKSLLEKFAWAM 61
Query: 876 DVDPDFRF 884
DV+P F F
Sbjct: 62 DVEPHFTF 69
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P30181 | 1.5e-294 | 60.87 | DNA topoisomerase 1 alpha OS=Arabidopsis thaliana OX=3702 GN=TOP1A PE=1 SV=1 | [more] |
Q9FJ79 | 7.5e-294 | 61.46 | DNA topoisomerase 1 beta OS=Arabidopsis thaliana OX=3702 GN=TOP1B PE=1 SV=1 | [more] |
P93119 | 5.4e-236 | 59.01 | DNA topoisomerase 1 OS=Daucus carota OX=4039 GN=TOP1 PE=2 SV=1 | [more] |
Q54RC3 | 5.8e-145 | 39.09 | DNA topoisomerase 1 OS=Dictyostelium discoideum OX=44689 GN=top1 PE=3 SV=1 | [more] |
P07799 | 4.9e-144 | 40.12 | DNA topoisomerase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=28... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3BM72 | 0.0e+00 | 97.08 | DNA topoisomerase I OS=Cucumis melo OX=3656 GN=LOC103491068 PE=3 SV=1 | [more] |
A0A5A7VHI9 | 0.0e+00 | 95.15 | DNA topoisomerase I OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G... | [more] |
A0A0A0L2W2 | 0.0e+00 | 96.06 | DNA topoisomerase I OS=Cucumis sativus OX=3659 GN=Csa_3G063680 PE=3 SV=1 | [more] |
A0A6J1KZE0 | 0.0e+00 | 92.01 | DNA topoisomerase I OS=Cucurbita maxima OX=3661 GN=LOC111500229 PE=3 SV=1 | [more] |
A0A6J1EWI0 | 0.0e+00 | 91.79 | DNA topoisomerase I OS=Cucurbita moschata OX=3662 GN=LOC111438616 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_008449103.1 | 0.0e+00 | 97.08 | PREDICTED: DNA topoisomerase 1-like [Cucumis melo] >XP_008449104.1 PREDICTED: DN... | [more] |
KAA0065816.1 | 0.0e+00 | 95.15 | DNA topoisomerase 1-like [Cucumis melo var. makuwa] >TYJ96555.1 DNA topoisomeras... | [more] |
XP_004149585.1 | 0.0e+00 | 96.06 | DNA topoisomerase 1 alpha [Cucumis sativus] >XP_011650506.1 DNA topoisomerase 1 ... | [more] |
XP_038904656.1 | 0.0e+00 | 93.60 | DNA topoisomerase 1 alpha-like isoform X1 [Benincasa hispida] >XP_038904657.1 DN... | [more] |
XP_023553297.1 | 0.0e+00 | 91.79 | DNA topoisomerase 1 beta-like [Cucurbita pepo subsp. pepo] | [more] |