PI0012462 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCACCTGACGACATAATGACTCCACGATCGGTTCGTATGTCTAAGGCTAGGCCTGGTTCGAGCGGGTCGAAGAGAAAACGGGGAGGGCAGGCATTGGAGGCGGCAAAAATTATTCGCAGTGCCATGGAATATGCTAATGACCAACTTAAGGTCATTGCAGAATGA ATGTCACCTGACGACATAATGACTCCACGATCGGTTCGTATGTCTAAGGCTAGGCCTGGTTCGAGCGGGTCGAAGAGAAAACGGGGAGGGCAGGCATTGGAGGCGGCAAAAATTATTCGCAGTGCCATGGAATATGCTAATGACCAACTTAAGGTCATTGCAGAATGA ATGTCACCTGACGACATAATGACTCCACGATCGGTTCGTATGTCTAAGGCTAGGCCTGGTTCGAGCGGGTCGAAGAGAAAACGGGGAGGGCAGGCATTGGAGGCGGCAAAAATTATTCGCAGTGCCATGGAATATGCTAATGACCAACTTAAGGTCATTGCAGAATGA MSPDDIMTPRSVRMSKARPGSSGSKRKRGGQALEAAKIIRSAMEYANDQLKVIAE Homology
BLAST of PI0012462 vs. ExPASy TrEMBL
Match: A0A5A7V3C0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G001020 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.1e-08 Identity = 37/55 (67.27%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of PI0012462 vs. ExPASy TrEMBL
Match: A0A5A7TYQ6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G002060 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06 Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of PI0012462 vs. ExPASy TrEMBL
Match: A0A5A7V469 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00340 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.4e-06 Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of PI0012462 vs. ExPASy TrEMBL
Match: A0A5D3C2D3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00220 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.4e-06 Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 0
BLAST of PI0012462 vs. ExPASy TrEMBL
Match: A0A5A7T0C2 (RING-H2 finger protein ATL66 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001730 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.4e-06 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of PI0012462 vs. NCBI nr
Match: KAA0060365.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22108.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 67.4 bits (163), Expect = 4.4e-08 Identity = 37/55 (67.27%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of PI0012462 vs. NCBI nr
Match: KAA0048280.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 4.1e-06 Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of PI0012462 vs. NCBI nr
Match: KAA0052248.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK01812.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.1 bits (144), Expect = 7.0e-06 Identity = 31/55 (56.36%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of PI0012462 vs. NCBI nr
Match: KAA0036810.1 (RING-H2 finger protein ATL66 [Cucumis melo var. makuwa] >TYJ95878.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]) HSP 1 Score: 60.1 bits (144), Expect = 7.0e-06 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of PI0012462 vs. NCBI nr
Match: KAA0063768.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK05520.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.1 bits (144), Expect = 7.0e-06 Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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