Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAATGGAGAATACACATACCCCATTTATTCGAGACGTTTAGATATGGGAAAATGTTGTTTAGTACCAACCGAAGAAAGGAACGTAACAAAGATTCTGAGACCTCGATTGTTGTTATCTTTGAGAATATCATTCCACCTCATCCATTGGTTTATCAGTGTTCACCAGAGTTTGAGTTGAACAATTGGAAGATCAAGAAAACGCTAAAAGTCACTAAAGGATCTAAAAATTAA
mRNA sequence
ATGAAGGAATGGAGAATACACATACCCCATTTATTCGAGACGTTTAGATATGGGAAAATGTTGTTTAGTACCAACCGAAGAAAGGAACGTAACAAAGATTCTGAGACCTCGATTGTTGTTATCTTTGAGAATATCATTCCACCTCATCCATTGGTTTATCAGTGTTCACCAGAGTTTGAGTTGAACAATTGGAAGATCAAGAAAACGCTAAAAGTCACTAAAGGATCTAAAAATTAA
Coding sequence (CDS)
ATGAAGGAATGGAGAATACACATACCCCATTTATTCGAGACGTTTAGATATGGGAAAATGTTGTTTAGTACCAACCGAAGAAAGGAACGTAACAAAGATTCTGAGACCTCGATTGTTGTTATCTTTGAGAATATCATTCCACCTCATCCATTGGTTTATCAGTGTTCACCAGAGTTTGAGTTGAACAATTGGAAGATCAAGAAAACGCTAAAAGTCACTAAAGGATCTAAAAATTAA
Protein sequence
MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWKIKKTLKVTKGSKN
Homology
BLAST of PI0011737 vs. ExPASy TrEMBL
Match:
A0A5D3CCB3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00540 PE=4 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 5.7e-23
Identity = 54/77 (70.13%), Postives = 65/77 (84.42%), Query Frame = 0
Query: 1 MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFE 60
MKE RI IPHL ETF+ G++LF TN+RK RN+D E SIVV+F+N I PHPLV+QC P FE
Sbjct: 1 MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQCRPGFE 60
Query: 61 LNNWKIKKTLKVTKGSK 78
LNNW+IKKTL++TKGSK
Sbjct: 61 LNNWEIKKTLEITKGSK 77
BLAST of PI0011737 vs. ExPASy TrEMBL
Match:
A0A5A7TZF3 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001550 PE=4 SV=1)
HSP 1 Score: 112.8 bits (281), Expect = 6.3e-22
Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = 0
Query: 1 MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFE 60
MKE RI IPHL ETF+ G++LF T++RK N+DSE SI V+ EN PPHPLV++C P FE
Sbjct: 5 MKEERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENTSPPHPLVHKCPPGFE 64
Query: 61 LNNWKIKKTLKVTKGSK 78
LNNW+IKKTLKVTKGS+
Sbjct: 65 LNNWEIKKTLKVTKGSQ 81
BLAST of PI0011737 vs. ExPASy TrEMBL
Match:
A0A5A7TW53 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00640 PE=4 SV=1)
HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21
Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = 0
Query: 1 MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFE 60
MK+ RI IPHL ETF+ ++LF TN+RK RN+DSE SI V+ EN IPP+PLV+QC P FE
Sbjct: 411 MKKERISIPHLSETFKPRELLFDTNQRKRRNEDSEISIAVVSENTIPPYPLVHQCPPGFE 470
Query: 61 LNNWKIKKTLKVTKGS 77
LNNW+IKKTL+VTKGS
Sbjct: 471 LNNWEIKKTLEVTKGS 486
BLAST of PI0011737 vs. ExPASy TrEMBL
Match:
A0A5D3BMZ2 (Protein NYNRIN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00450 PE=4 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 2.4e-21
Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = 0
Query: 1 MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFE 60
MKE RI IPHL ETF+ G++LF T++RK N+DSE SI V+ ENI PHPLV++C P FE
Sbjct: 68 MKEERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFE 127
Query: 61 LNNWKIKKTLKVTKGSK 78
LNNW+IKKTLKVTKGS+
Sbjct: 128 LNNWEIKKTLKVTKGSQ 144
BLAST of PI0011737 vs. ExPASy TrEMBL
Match:
A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 6.9e-21
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 0
Query: 1 MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFE 60
MKE RI IPHL ETF+ G++LF T++RK N+DSE SI V+ ENI PHPLV++C P FE
Sbjct: 1062 MKEERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFE 1121
Query: 61 LNNWKIKKTLKVTKGSK 78
LNNW+IKK+LKVTKGS+
Sbjct: 1122 LNNWEIKKSLKVTKGSQ 1138
BLAST of PI0011737 vs. NCBI nr
Match:
TYK09461.1 (uncharacterized protein E5676_scaffold499G00540 [Cucumis melo var. makuwa])
HSP 1 Score: 116.3 bits (290), Expect = 1.2e-22
Identity = 54/77 (70.13%), Postives = 65/77 (84.42%), Query Frame = 0
Query: 1 MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFE 60
MKE RI IPHL ETF+ G++LF TN+RK RN+D E SIVV+F+N I PHPLV+QC P FE
Sbjct: 1 MKEERISIPHLSETFKPGELLFDTNQRKRRNEDFEISIVVVFKNTILPHPLVHQCRPGFE 60
Query: 61 LNNWKIKKTLKVTKGSK 78
LNNW+IKKTL++TKGSK
Sbjct: 61 LNNWEIKKTLEITKGSK 77
BLAST of PI0011737 vs. NCBI nr
Match:
KAE8648568.1 (hypothetical protein Csa_007830, partial [Cucumis sativus])
HSP 1 Score: 114.4 bits (285), Expect = 4.5e-22
Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 0
Query: 6 IHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFELNNWK 65
+HIPHLFETFR G+ LF+TN+RK RNKDS TS+VVI +NIIPPHPLVYQC P+FELN+WK
Sbjct: 1 MHIPHLFETFRLGERLFNTNQRKGRNKDSNTSVVVISDNIIPPHPLVYQCPPDFELNDWK 60
Query: 66 IKKTLKV 73
KKTL +
Sbjct: 61 TKKTLNI 67
BLAST of PI0011737 vs. NCBI nr
Match:
KAA0046609.1 (hypothetical protein E6C27_scaffold114G001550 [Cucumis melo var. makuwa])
HSP 1 Score: 112.8 bits (281), Expect = 1.3e-21
Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = 0
Query: 1 MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFE 60
MKE RI IPHL ETF+ G++LF T++RK N+DSE SI V+ EN PPHPLV++C P FE
Sbjct: 5 MKEERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENTSPPHPLVHKCPPGFE 64
Query: 61 LNNWKIKKTLKVTKGSK 78
LNNW+IKKTLKVTKGS+
Sbjct: 65 LNNWEIKKTLKVTKGSQ 81
BLAST of PI0011737 vs. NCBI nr
Match:
KAA0045605.1 (Gag-pro-like protein [Cucumis melo var. makuwa] >TYK02652.1 Gag-pro-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 111.3 bits (277), Expect = 3.8e-21
Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = 0
Query: 1 MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFE 60
MK+ RI IPHL ETF+ ++LF TN+RK RN+DSE SI V+ EN IPP+PLV+QC P FE
Sbjct: 411 MKKERISIPHLSETFKPRELLFDTNQRKRRNEDSEISIAVVSENTIPPYPLVHQCPPGFE 470
Query: 61 LNNWKIKKTLKVTKGS 77
LNNW+IKKTL+VTKGS
Sbjct: 471 LNNWEIKKTLEVTKGS 486
BLAST of PI0011737 vs. NCBI nr
Match:
TYK00092.1 (protein NYNRIN-like [Cucumis melo var. makuwa])
HSP 1 Score: 110.9 bits (276), Expect = 4.9e-21
Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = 0
Query: 1 MKEWRIHIPHLFETFRYGKMLFSTNRRKERNKDSETSIVVIFENIIPPHPLVYQCSPEFE 60
MKE RI IPHL ETF+ G++LF T++RK N+DSE SI V+ ENI PHPLV++C P FE
Sbjct: 68 MKEERISIPHLSETFKLGELLFDTHQRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFE 127
Query: 61 LNNWKIKKTLKVTKGSK 78
LNNW+IKKTLKVTKGS+
Sbjct: 128 LNNWEIKKTLKVTKGSQ 144
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CCB3 | 5.7e-23 | 70.13 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7TZF3 | 6.3e-22 | 67.53 | Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G00155... | [more] |
A0A5A7TW53 | 1.8e-21 | 68.42 | Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280... | [more] |
A0A5D3BMZ2 | 2.4e-21 | 67.53 | Protein NYNRIN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G... | [more] |
A0A5A7V681 | 6.9e-21 | 66.23 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
Match Name | E-value | Identity | Description | |
TYK09461.1 | 1.2e-22 | 70.13 | uncharacterized protein E5676_scaffold499G00540 [Cucumis melo var. makuwa] | [more] |
KAE8648568.1 | 4.5e-22 | 74.63 | hypothetical protein Csa_007830, partial [Cucumis sativus] | [more] |
KAA0046609.1 | 1.3e-21 | 67.53 | hypothetical protein E6C27_scaffold114G001550 [Cucumis melo var. makuwa] | [more] |
KAA0045605.1 | 3.8e-21 | 68.42 | Gag-pro-like protein [Cucumis melo var. makuwa] >TYK02652.1 Gag-pro-like protein... | [more] |
TYK00092.1 | 4.9e-21 | 67.53 | protein NYNRIN-like [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |