Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAAATCGATTCAAATTCTTACAAGGTAAGTTGCAATTTTATTTGCTAGGAGGTCCTAACTTTATTGGTTAAACTTAAAGTGTGTTTGGATTGACTTTTTAAGGGTTTATAAACACTTTTTTTGCACTTATAAATACTTTTTTAAACACTTAAAAAGTCAATCTAAACATGTACTTAGTATAGATTTTGTCTATTCTACTTGGTACTGAATAGTATTAAAATTTGACCGTTGGATTGTGAAAAAATTTAGTAGTTGTATGGAGTCTCATGACTCTTAGGTAACTAGTGATAAATATCAAAAGAATAACAAAGTGTTTTTTGTTCTCCATTCTGGTGATTGGTTTCAAGTTCATGGATTTTAGTGGTGAAGTAAAACTTAGACTTTAATGGTTTTGTACTTCCAATCTCTCAAATCTAAGTTTACTACATTAGTTCAAAATTGCATGTTAGATTGGGAGGTGTTTTCTATATAAAGCTTGAGTTTCACCCTTTTCGAAGTCGTTTTTAGGATTGTTTTGTGAGCATGGTTATAGGAATATTTGCTGGTTGTGGAAAACCACAACTGTTTTAACTCCAAATTCATATATGATTCTTCTTCCTTGTTTGGTTAGATCCCTAGATCGCCCATTGTGTTGAGGTTGCTAATAGGTAAGTTATGTGAATTTAATTTGACAATGGATGGAGTTGTACAGTAGTTTACTGTTTCATTATTCACATCGTTCTTAAACATACTCATGTGGATGAAATAACGATGATAGAAATCAAGTTACAAATGATTTTCAATGTTCTTTTTTTTTTCTGCTGGGAACCTTACTGCTAATATTTAGTTGCTTATGGATAGTTTGAAATTAATGTTTAGTTTGAAATTAATGATTTTGGTTTTTGGCTTTTGAAAACTAAACATATTTTCTCTTCATTTTTTGCAATGATTTGCATCTTTATTTAGTACAAAAGTACACATTCCTCCTACTTTGTTATCAAGGTTAGAACATATTATTGATTTACTAACCAGAATACTTTTAAAACATTGTATACTTGCATCTATATTGAGTACCTGCTGAGCTGTTGCTGCAAATATTTATTCATAAGTTTGGCACCATGAACTAATGATGTTACGAAAATTGACACTGGTTAAACCTTGTAATGTTGAAAATTAATTTTATTATCATATAATTTGGACTTTAGGTGCAACAATAGACTGGAATTATTTTGTTATTATTGGCTTCTCAGGTTTGACTTGATTTATCTAATTTTGGATAAAGCTGCTGAGCAAACAGATAGGCTAAGCATATTGTCTCACTGCACTTTGACAACCCTGAGGTCTGAGTAACTTGCAATTCCAGTCATAGTTGGGCTACTTCTAGTGTCTTGTTCATCATTTAGTTGCACTCCTCAATTTGCAGGGCATTGAGCAGGATTTCTTGGACCTTCATACCTTGACTTCATATGTCAGCTATGCTAGGAAAAACATTCATCCAAAATTGTCAAATGAGGCAGCTGAAGAGTTGACTAGAGGCTATGTTGAGCTGAATAGAAAAGGAAACTTTCCAGGCAGTAGTAAAAAGGTACATTTTTTCAAATACATTCCAGTGCAAGCAAATCTGATTGTGTACCTTGTTCCCTGCCTTCTCTATATTTGTTTTTGGTTTAGCATTTTTGAAACTACAACTCATGTTGTAGTGATGGGGAGAGAGGGAAAGAGGGATTTATATTTTTCTGTTTCTTATTGGAATTTGTTATTGTATTGACAGGTCATTACAACTACCCCTGACAGATCGAGAGTTTAATATGTCTAAACGAAGCCCTTGCTCGAATACGTTTCTCAGAATGGATTAGTGAAGCCACTTTTTCTTTTGTTGCTAGATTGAGTTGGTTCAGAAGAAGTTATTGTTGAGTGGCAGATGATCTTCCAACGATCAGATAAAGTCAAACTATATAAGAAAATTTATTTACTTTGTGAATTTAAGAATTTATTTAGTTCATTAACTAATCTATTGTTAGAGTTAGATCATGATGTTTCTTTTTATTTTTTATTAGGTGATCAATATGTGGAAAATACATTGA
mRNA sequence
ATGCAGAAATCGATTCAAATTCTTACAAGCTATGCTAGGAAAAACATTCATCCAAAATTGTCAAATGAGGCAGCTGAAGAGTTGACTAGAGGCTATGTTGAGCTGAATAGAAAAGGAAACTTTCCAGGCAGTAGTAAAAAGGTGATCAATATGTGGAAAATACATTGA
Coding sequence (CDS)
ATGCAGAAATCGATTCAAATTCTTACAAGCTATGCTAGGAAAAACATTCATCCAAAATTGTCAAATGAGGCAGCTGAAGAGTTGACTAGAGGCTATGTTGAGCTGAATAGAAAAGGAAACTTTCCAGGCAGTAGTAAAAAGGTGATCAATATGTGGAAAATACATTGA
Protein sequence
MQKSIQILTSYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVINMWKIH
Homology
BLAST of PI0010659 vs. ExPASy Swiss-Prot
Match:
Q0WVF5 (DNA replication licensing factor MCM4 OS=Arabidopsis thaliana OX=3702 GN=MCM4 PE=1 SV=1)
HSP 1 Score: 70.5 bits (171), Expect = 6.8e-12
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query: 10 SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
SYARKNIHPKLS+EAAEELTRGYVEL + G F GSSKKVI
Sbjct: 667 SYARKNIHPKLSDEAAEELTRGYVELRKAGKFAGSSKKVI 706
BLAST of PI0010659 vs. ExPASy Swiss-Prot
Match:
Q5JKB0 (DNA replication licensing factor MCM4 OS=Oryza sativa subsp. japonica OX=39947 GN=MCM4 PE=3 SV=2)
HSP 1 Score: 64.7 bits (156), Expect = 3.7e-10
Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query: 10 SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
SYARK+I P+LS+EAAEELTRGYVE+ ++GN PGS KKVI
Sbjct: 685 SYARKHIQPQLSDEAAEELTRGYVEMRKRGNSPGSRKKVI 724
BLAST of PI0010659 vs. ExPASy TrEMBL
Match:
A0A6J1EAM6 (DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111432387 PE=3 SV=1)
HSP 1 Score: 78.6 bits (192), Expect = 9.2e-12
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 0
Query: 5 IQILT---SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
+Q LT SYARKNIHPKLS+EAAEELTRGYVEL R+GNFPGSSKKVI
Sbjct: 659 LQTLTSYVSYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVI 706
BLAST of PI0010659 vs. ExPASy TrEMBL
Match:
A0A6J1I0Z7 (DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111468442 PE=3 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 1.2e-11
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query: 10 SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
SYARKNIHPKLS+EAAEELTRGYVEL R+GNFPGSSKKVI
Sbjct: 667 SYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVI 706
BLAST of PI0010659 vs. ExPASy TrEMBL
Match:
A0A5A7SX80 (DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00670 PE=3 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 1.2e-11
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query: 10 SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
SYARKNIHPKLS+EAAEELTRGYVEL R+GNFPGSSKKVI
Sbjct: 666 SYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVI 705
BLAST of PI0010659 vs. ExPASy TrEMBL
Match:
A0A6J1KVB0 (DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111496758 PE=3 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 1.2e-11
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query: 10 SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
SYARKNIHPKLS+EAAEELTRGYVEL R+GNFPGSSKKVI
Sbjct: 645 SYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVI 684
BLAST of PI0010659 vs. ExPASy TrEMBL
Match:
A0A0A0K5P7 (DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_7G004140 PE=3 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 1.2e-11
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query: 10 SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
SYARKNIHPKLS+EAAEELTRGYVEL R+GNFPGSSKKVI
Sbjct: 666 SYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVI 705
BLAST of PI0010659 vs. NCBI nr
Match:
XP_022925017.1 (DNA replication licensing factor MCM4-like [Cucurbita moschata])
HSP 1 Score: 78.6 bits (192), Expect = 1.9e-11
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 0
Query: 5 IQILT---SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
+Q LT SYARKNIHPKLS+EAAEELTRGYVEL R+GNFPGSSKKVI
Sbjct: 659 LQTLTSYVSYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVI 706
BLAST of PI0010659 vs. NCBI nr
Match:
XP_023511685.1 (DNA replication licensing factor MCM4-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 78.2 bits (191), Expect = 2.5e-11
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query: 10 SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
SYARKNIHPKLS+EAAEELTRGYVEL R+GNFPGSSKKVI
Sbjct: 667 SYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVI 706
BLAST of PI0010659 vs. NCBI nr
Match:
XP_038887342.1 (DNA replication licensing factor MCM4 isoform X2 [Benincasa hispida])
HSP 1 Score: 78.2 bits (191), Expect = 2.5e-11
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query: 10 SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
SYARKNIHPKLS+EAAEELTRGYVEL R+GNFPGSSKKVI
Sbjct: 667 SYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVI 706
BLAST of PI0010659 vs. NCBI nr
Match:
XP_022969442.1 (DNA replication licensing factor MCM4 isoform X1 [Cucurbita maxima] >XP_022969443.1 DNA replication licensing factor MCM4 isoform X2 [Cucurbita maxima])
HSP 1 Score: 78.2 bits (191), Expect = 2.5e-11
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query: 10 SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
SYARKNIHPKLS+EAAEELTRGYVEL R+GNFPGSSKKVI
Sbjct: 667 SYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVI 706
BLAST of PI0010659 vs. NCBI nr
Match:
KAG6588427.1 (DNA replication licensing factor MCM4, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 78.2 bits (191), Expect = 2.5e-11
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query: 10 SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
SYARKNIHPKLS+EAAEELTRGYVEL R+GNFPGSSKKVI
Sbjct: 705 SYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVI 744
BLAST of PI0010659 vs. TAIR 10
Match:
AT2G16440.1 (Minichromosome maintenance (MCM2/3/5) family protein )
HSP 1 Score: 70.5 bits (171), Expect = 4.8e-13
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query: 10 SYARKNIHPKLSNEAAEELTRGYVELNRKGNFPGSSKKVI 50
SYARKNIHPKLS+EAAEELTRGYVEL + G F GSSKKVI
Sbjct: 667 SYARKNIHPKLSDEAAEELTRGYVELRKAGKFAGSSKKVI 706
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q0WVF5 | 6.8e-12 | 85.00 | DNA replication licensing factor MCM4 OS=Arabidopsis thaliana OX=3702 GN=MCM4 PE... | [more] |
| Q5JKB0 | 3.7e-10 | 75.00 | DNA replication licensing factor MCM4 OS=Oryza sativa subsp. japonica OX=39947 G... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1EAM6 | 9.2e-12 | 83.33 | DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111432387 PE=3 SV=1 | [more] |
| A0A6J1I0Z7 | 1.2e-11 | 92.50 | DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111468442 PE=3 SV=1 | [more] |
| A0A5A7SX80 | 1.2e-11 | 92.50 | DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00670 ... | [more] |
| A0A6J1KVB0 | 1.2e-11 | 92.50 | DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111496758 PE=3 SV=1 | [more] |
| A0A0A0K5P7 | 1.2e-11 | 92.50 | DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_7G004140 PE=3 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022925017.1 | 1.9e-11 | 83.33 | DNA replication licensing factor MCM4-like [Cucurbita moschata] | [more] |
| XP_023511685.1 | 2.5e-11 | 92.50 | DNA replication licensing factor MCM4-like [Cucurbita pepo subsp. pepo] | [more] |
| XP_038887342.1 | 2.5e-11 | 92.50 | DNA replication licensing factor MCM4 isoform X2 [Benincasa hispida] | [more] |
| XP_022969442.1 | 2.5e-11 | 92.50 | DNA replication licensing factor MCM4 isoform X1 [Cucurbita maxima] >XP_02296944... | [more] |
| KAG6588427.1 | 2.5e-11 | 92.50 | DNA replication licensing factor MCM4, partial [Cucurbita argyrosperma subsp. so... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G16440.1 | 4.8e-13 | 85.00 | Minichromosome maintenance (MCM2/3/5) family protein | [more] |
