PI0010354 (gene) Melon (PI 482460) v1

Overview


Name	PI0010354
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon protein
Location	chr06: 9237470 .. 9238118 (-)
RNA-Seq Expression	PI0010354
Synteny	PI0010354

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGTTCTTCAAGAGCACCGAAACACACATGGACTAAAGAGGAAGAAGCAAAGTTGGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGTGGGTGGAGGTCAGATAATGGGACATTTCGACCTGGATACTTGGCACAATTACAACAAATGATGGCGGAGAAGTTGCTCGGCACTAACATCCAAGGATCACCGACTATTGATTGTAGTGTCAAATCCCTTAAGAAAACCTATCAAGCAATTGCAGAAATGAGGGGGCCATCCAGTAGTGGGTTTGGATGGAATGAAGAATATCAATGCATCATCGCAAAACGGGAGTTGTTTGATAGTTGGCTCAAGGTACAATTTTCATAAAACAATTTGATCTACTTACAAAATTACAACCATCAACTAATCTGTCTGTTTCATGTTTGTACAGAGTCATTCTGCGACCAAAAGACTTTTGCACAAATCATTTCCATATTATGACGATCTGTCGTATGTGTTCGGCAGAGATCAGGCAACAGAAGCATATGCGGAGACCTTTGCTAACGTGGGATCTAATGTGCCAAATAGTTTTAATGACAGTGTTCTACTTGGTGATCTACATGATGAAGAATCCCAACGATGTATAGCCAAGGAGTGGATATGTCCCCAGATGACATGTTAG

mRNA sequence

ATGACAAGTTCTTCAAGAGCACCGAAACACACATGGACTAAAGAGGAAGAAGCAAAGTTGGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGTGGGTGGAGGTCAGATAATGGGACATTTCGACCTGGATACTTGGCACAATTACAACAAATGATGGCGGAGAAGTTGCTCGGCACTAACATCCAAGGATCACCGACTATTGATTGTAGTGTCAAATCCCTTAAGAAAACCTATCAAGCAATTGCAGAAATGAGGGGGCCATCCAGTAGTGGGTTTGGATGGAATGAAGAATATCAATGCATCATCGCAAAACGGGAGTTGTTTGATAGTTGGCTCAAGAGTCATTCTGCGACCAAAAGACTTTTGCACAAATCATTTCCATATTATGACGATCTGTCGTATGTGTTCGGCAGAGATCAGGCAACAGAAGCATATGCGGAGACCTTTGCTAACGTGGGATCTAATGTGCCAAATAGTTTTAATGACAGTGTTCTACTTGGTGATCTACATGATGAAGAATCCCAACGATGTATAGCCAAGGAGTGGATATGTCCCCAGATGACATGTTAG

Coding sequence (CDS)

ATGACAAGTTCTTCAAGAGCACCGAAACACACATGGACTAAAGAGGAAGAAGCAAAGTTGGTTGAGTGCTTGGTGGAATTGGTTTCATCTGGTGGGTGGAGGTCAGATAATGGGACATTTCGACCTGGATACTTGGCACAATTACAACAAATGATGGCGGAGAAGTTGCTCGGCACTAACATCCAAGGATCACCGACTATTGATTGTAGTGTCAAATCCCTTAAGAAAACCTATCAAGCAATTGCAGAAATGAGGGGGCCATCCAGTAGTGGGTTTGGATGGAATGAAGAATATCAATGCATCATCGCAAAACGGGAGTTGTTTGATAGTTGGCTCAAGAGTCATTCTGCGACCAAAAGACTTTTGCACAAATCATTTCCATATTATGACGATCTGTCGTATGTGTTCGGCAGAGATCAGGCAACAGAAGCATATGCGGAGACCTTTGCTAACGTGGGATCTAATGTGCCAAATAGTTTTAATGACAGTGTTCTACTTGGTGATCTACATGATGAAGAATCCCAACGATGTATAGCCAAGGAGTGGATATGTCCCCAGATGACATGTTAG

Protein sequence

MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQQMMAEKLLGTNIQGSPTIDCSVKSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKRLLHKSFPYYDDLSYVFGRDQATEAYAETFANVGSNVPNSFNDSVLLGDLHDEESQRCIAKEWICPQMTC

Homology

[Close]

BLAST of PI0010354 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.3e-77
Identity = 141/173 (81.50%), Postives = 153/173 (88.44%), Query Frame = 0


Query: 1   MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQQMMAEKLLGTN 60
           M S SRAPKHTWTKEEE K VECLVELVSSGGWRSDNGTF+PGYLAQLQ+MMAEKL GTN
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IQGSPTIDCSVKSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKR 120
           IQ S TIDC VKSLKKTY AIAEMRGPS SGFGWNEE+QCIIA+R+LFDSW+KSH A K 
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLHKSFPYYDDLSYVFGRDQATEAYAETFANVGSNVPNSFNDSVLLGDLHDEE 174
           LLHKSFPYYDDLSYVFG+D+AT A +ETF NVGSNV N FND++ LGD HDE+
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDED 173

[Close]

BLAST of PI0010354 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.3e-77
Identity = 141/173 (81.50%), Postives = 153/173 (88.44%), Query Frame = 0


Query: 1   MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQQMMAEKLLGTN 60
           M S SRAPKHTWTKEEE K VECLVELVSSGGWRSDNGTF+PGYLAQLQ+MMAEKL GTN
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IQGSPTIDCSVKSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKR 120
           IQ S TIDC VKSLKKTY AIAEMRGPS SGFGWNEE+QCIIA+R+LFDSW+KSH A K 
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLHKSFPYYDDLSYVFGRDQATEAYAETFANVGSNVPNSFNDSVLLGDLHDEE 174
           LLHKSFPYYDDLSYVFG+D+AT A +ETF NVGSNV N FND++ LGD HDE+
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDED 173

[Close]

BLAST of PI0010354 vs. ExPASy TrEMBL
Match: A0A5A7TJS2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00710 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.8e-67
Identity = 127/173 (73.41%), Postives = 146/173 (84.39%), Query Frame = 0


Query: 1   MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQQMMAEKLLGTN 60
           MTSSSRA KHTWTKEEEAKLVECLVELVS+GGWRS+NGTFR GYLAQLQ+MM +KL  TN
Sbjct: 172 MTSSSRASKHTWTKEEEAKLVECLVELVSAGGWRSNNGTFRHGYLAQLQRMMVKKLSDTN 231

Query: 61  IQGSPTIDCSVKSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKR 120
           IQGS  +DC VKSLKK   +   MRGPS SGFGWNE++QCIIA+R+LFD+W+KSH   + 
Sbjct: 232 IQGSLPMDCRVKSLKKHLPSNFRMRGPSCSGFGWNEKFQCIIAERDLFDNWVKSHPTAEG 291

Query: 121 LLHKSFPYYDDLSYVFGRDQATEAYAETFANVGSNVPNSFNDSVLLGDLHDEE 174
           LLHKSFPYYDDLSYVF +D+ATEA  ETFA+VGSNV N FND V LGD +D++
Sbjct: 292 LLHKSFPYYDDLSYVFDKDRATEARLETFADVGSNVLNMFNDGVPLGDSYDQD 344

[Close]

BLAST of PI0010354 vs. ExPASy TrEMBL
Match: A0A5D3D8J6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold307G00030 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 7.0e-67
Identity = 126/173 (72.83%), Postives = 146/173 (84.39%), Query Frame = 0


Query: 1   MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQQMMAEKLLGTN 60
           MTSSSRA KHTWTKEEEAKLVECLVELVS+GGWRS+NGTFR GYLAQLQ+MM +KL  TN
Sbjct: 172 MTSSSRASKHTWTKEEEAKLVECLVELVSAGGWRSNNGTFRLGYLAQLQRMMVKKLSDTN 231

Query: 61  IQGSPTIDCSVKSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKR 120
           IQGS  +DC VKSLKK   +   +RGPS SGFGWNE++QCIIA+R+LFD+W+KSH   + 
Sbjct: 232 IQGSLPMDCRVKSLKKHLPSNFRIRGPSCSGFGWNEKFQCIIAERDLFDNWVKSHPTAEG 291

Query: 121 LLHKSFPYYDDLSYVFGRDQATEAYAETFANVGSNVPNSFNDSVLLGDLHDEE 174
           LLHKSFPYYDDLSYVF +D+ATEA  ETFA+VGSNV N FND V LGD +D++
Sbjct: 292 LLHKSFPYYDDLSYVFDKDRATEARLETFADVGSNVLNMFNDGVPLGDSYDQD 344

[Close]

BLAST of PI0010354 vs. ExPASy TrEMBL
Match: A0A5A7T2T9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00580 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61
Identity = 109/172 (63.37%), Postives = 144/172 (83.72%), Query Frame = 0


Query: 1   MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQQMMAEKLLGTN 60
           M++S+RAP+H WT+EEE  LVECL+ELVS GGW+SDNGTFRPGYLAQL +MMAEKLLG  
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLLGCQ 60

Query: 61  IQGSPTIDCSVKSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKR 120
           ++ +  IDC +K+LK+T+QAIAEMR P+ SGFGWN+E +CI+A++ELFD+W++SH A K 
Sbjct: 61  VRATTVIDCRIKTLKQTFQAIAEMRDPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLHKSFPYYDDLSYVFGRDQATEAYAETFANVGSNVPNSFNDSVLLGDLHDE 173
           LL+K FPYYD+L+YVFGRD+AT+ +AETFA+VGSN P    D   +GD +++
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATDRFAETFADVGSNEPGGGYDRFDMGDGNED 172

[Close]

BLAST of PI0010354 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 297.7 bits (761), Expect = 6.9e-77
Identity = 141/173 (81.50%), Postives = 153/173 (88.44%), Query Frame = 0


Query: 1   MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQQMMAEKLLGTN 60
           M S SRAPKHTWTKEEE K VECLVELVSSGGWRSDNGTF+PGYLAQLQ+MMAEKL GTN
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IQGSPTIDCSVKSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKR 120
           IQ S TIDC VKSLKKTY AIAEMRGPS SGFGWNEE+QCIIA+R+LFDSW+KSH A K 
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 LLHKSFPYYDDLSYVFGRDQATEAYAETFANVGSNVPNSFNDSVLLGDLHDEE 174
           LLHKSFPYYDDLSYVFG+D+AT A +ETF NVGSNV N FND++ LGD HDE+
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDED 173

[Close]

BLAST of PI0010354 vs. NCBI nr
Match: KAA0043564.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 3.8e-67
Identity = 127/173 (73.41%), Postives = 146/173 (84.39%), Query Frame = 0


Query: 1   MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQQMMAEKLLGTN 60
           MTSSSRA KHTWTKEEEAKLVECLVELVS+GGWRS+NGTFR GYLAQLQ+MM +KL  TN
Sbjct: 172 MTSSSRASKHTWTKEEEAKLVECLVELVSAGGWRSNNGTFRHGYLAQLQRMMVKKLSDTN 231

Query: 61  IQGSPTIDCSVKSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKR 120
           IQGS  +DC VKSLKK   +   MRGPS SGFGWNE++QCIIA+R+LFD+W+KSH   + 
Sbjct: 232 IQGSLPMDCRVKSLKKHLPSNFRMRGPSCSGFGWNEKFQCIIAERDLFDNWVKSHPTAEG 291

Query: 121 LLHKSFPYYDDLSYVFGRDQATEAYAETFANVGSNVPNSFNDSVLLGDLHDEE 174
           LLHKSFPYYDDLSYVF +D+ATEA  ETFA+VGSNV N FND V LGD +D++
Sbjct: 292 LLHKSFPYYDDLSYVFDKDRATEARLETFADVGSNVLNMFNDGVPLGDSYDQD 344

[Close]

BLAST of PI0010354 vs. NCBI nr
Match: TYK19779.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 263.5 bits (672), Expect = 1.4e-66
Identity = 126/173 (72.83%), Postives = 146/173 (84.39%), Query Frame = 0


Query: 1   MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQQMMAEKLLGTN 60
           MTSSSRA KHTWTKEEEAKLVECLVELVS+GGWRS+NGTFR GYLAQLQ+MM +KL  TN
Sbjct: 172 MTSSSRASKHTWTKEEEAKLVECLVELVSAGGWRSNNGTFRLGYLAQLQRMMVKKLSDTN 231

Query: 61  IQGSPTIDCSVKSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKR 120
           IQGS  +DC VKSLKK   +   +RGPS SGFGWNE++QCIIA+R+LFD+W+KSH   + 
Sbjct: 232 IQGSLPMDCRVKSLKKHLPSNFRIRGPSCSGFGWNEKFQCIIAERDLFDNWVKSHPTAEG 291

Query: 121 LLHKSFPYYDDLSYVFGRDQATEAYAETFANVGSNVPNSFNDSVLLGDLHDEE 174
           LLHKSFPYYDDLSYVF +D+ATEA  ETFA+VGSNV N FND V LGD +D++
Sbjct: 292 LLHKSFPYYDDLSYVFDKDRATEARLETFADVGSNVLNMFNDGVPLGDSYDQD 344

[Close]

BLAST of PI0010354 vs. NCBI nr
Match: KAA0035775.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-61
Identity = 109/172 (63.37%), Postives = 144/172 (83.72%), Query Frame = 0


Query: 1   MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQQMMAEKLLGTN 60
           M++S+RAP+H WT+EEE  LVECL+ELVS GGW+SDNGTFRPGYLAQL +MMAEKLLG  
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLLGCQ 60

Query: 61  IQGSPTIDCSVKSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKR 120
           ++ +  IDC +K+LK+T+QAIAEMR P+ SGFGWN+E +CI+A++ELFD+W++SH A K 
Sbjct: 61  VRATTVIDCRIKTLKQTFQAIAEMRDPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLHKSFPYYDDLSYVFGRDQATEAYAETFANVGSNVPNSFNDSVLLGDLHDE 173
           LL+K FPYYD+L+YVFGRD+AT+ +AETFA+VGSN P    D   +GD +++
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATDRFAETFADVGSNEPGGGYDRFDMGDGNED 172

[Close]

BLAST of PI0010354 vs. NCBI nr
Match: KAA0038975.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 245.4 bits (625), Expect = 4.1e-61
Identity = 110/174 (63.22%), Postives = 144/174 (82.76%), Query Frame = 0


Query: 1   MTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQQMMAEKLLGTN 60
           M++S+RAP+H WT+EEE  LVECL+ELVS GGW+SDNGTFRPGYLAQL +MMAEKL G  
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  IQGSPTIDCSVKSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKR 120
           ++ +  IDC +K+LK+T+QAIAEMRGP+ SGFGWN+E +CI+A++ELFD+W++SH A K 
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 LLHKSFPYYDDLSYVFGRDQATEAYAETFANVGSNVPNSFNDSVLLGDLHDEES 175
           LL+K FPYYD+L+YVFGRD+AT  +AETFA+VGSN P    D   +GD +++ S
Sbjct: 121 LLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNEDFS 174

[Close]

BLAST of PI0010354 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 5.7e-05
Identity = 20/66 (30.30%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 72  KSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKRLLHKSFPYYDD 131
           KSL++ + AI  +    S GF W+ E Q + A   ++  ++K+H   ++ + +  PYY D
Sbjct: 242 KSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKD 301

Query: 132 LSYVFG 138
           L  + G
Sbjct: 302 LCVLCG 305

[Close]

BLAST of PI0010354 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 45.4 bits (106), Expect = 5.7e-05
Identity = 20/66 (30.30%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 72  KSLKKTYQAIAEMRGPSSSGFGWNEEYQCIIAKRELFDSWLKSHSATKRLLHKSFPYYDD 131
           KSL++ + AI  +    S GF W+ E Q + A   ++  ++K+H   ++ + +  PYY D
Sbjct: 242 KSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKD 301

Query: 132 LSYVFG 138
           L  + G
Sbjct: 302 LCVLCG 305

The following BLAST results are available for this feature:

BLAST of PI0010354 vs.


Match Name	E-value	Identity	Description

BLAST of PI0010354 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0H7	3.3e-77	81.50	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B4L3	3.3e-77	81.50	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
A0A5A7TJS2	1.8e-67	73.41	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D8J6	7.0e-67	72.83	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T2T9	1.2e-61	63.37	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0010354 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441954.1	6.9e-77	81.50	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret...	[more]
KAA0043564.1	3.8e-67	73.41	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK19779.1	1.4e-66	72.83	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0035775.1	2.4e-61	63.37	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0038975.1	4.1e-61	63.22	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0010354 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02210.1	5.7e-05	30.30	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	5.7e-05	30.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 11..108 e-value: 1.9E-6 score: 28.8
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 3..159
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 3..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0010354.1	PI0010354.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane