Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACAACACTCAAATGAAAGCAGCTTTAATCTTAATAATTATGATGATATATTTAGAACATCATCATCAAAGAATTGCAGTAGCAAAGTTGAGTGGTTGAAAAGGATGGTGAAGCTGATTGTGTTTTGTTTGGTTTTAGGGTTGTTTTTTTCTGTCTTCTCTTTATTTCCCCATTCCTTTAGTGTCTATTTTCAACTTTCCTCTTCTCCATTCTAAACCATGCCATGGAAAGAAAATACATGTTCTTAATTTGTAATATTGGAATTCTGTTTCTTCTTGCCACTTCCTCTGTTTCTTCTTCTTCCTCTTCTTTGGGAATTATTGTTCATTTCCCCATTCCCATCATCATCATCATCATCATCATCATGACAACTTATTTGAACATGATGTTGTAGTCGCTGCTGCCATTGATGAAGAATCTGATTCTGATCAGGCTCGAGAAGGAGGAGAAGAAGAAGAAGAAGAAAAGGAAGAAGCTGGAATTTGTAGAGGTGACTTATTAGAGGAAGAATTAGAAGAAGATGATGGGTGTTTTACAGATGAGGTTGAAGAAGAAGAAGAAGATCAAAAAGAAGGAAAAAGGAGAGAATTAGAGATAGTGGTGAGTACAGAGGAATTGAACAAGAAAATTGAAGACTTTATTAGAAAAATGAAGGAGGAAATGAGGATTGAAGCAGCTCAAACTCACCTCATTGCTGTGTAA
mRNA sequence
ATGGAACAACACTCAAATGAAAGCAGCTTTAATCTTAATAATTATGATGATATATTTAGAACATCATCATCAAAGAATTGCAGTAGCAAAGTTGAGTGGTTGAAAAGGATGGTGAAGCTGATTGTGTTTTGTTTGGTTTTAGGGTTGTTTTTTTCTGTCTTCTCTTTATTTCCCCATTCCTTTATCGCTGCTGCCATTGATGAAGAATCTGATTCTGATCAGGCTCGAGAAGGAGGAGAAGAAGAAGAAGAAGAAAAGGAAGAAGCTGGAATTTGTAGAGGTGACTTATTAGAGGAAGAATTAGAAGAAGATGATGGGTGTTTTACAGATGAGGTTGAAGAAGAAGAAGAAGATCAAAAAGAAGGAAAAAGGAGAGAATTAGAGATAGTGGTGAGTACAGAGGAATTGAACAAGAAAATTGAAGACTTTATTAGAAAAATGAAGGAGGAAATGAGGATTGAAGCAGCTCAAACTCACCTCATTGCTGTGTAA
Coding sequence (CDS)
ATGGAACAACACTCAAATGAAAGCAGCTTTAATCTTAATAATTATGATGATATATTTAGAACATCATCATCAAAGAATTGCAGTAGCAAAGTTGAGTGGTTGAAAAGGATGGTGAAGCTGATTGTGTTTTGTTTGGTTTTAGGGTTGTTTTTTTCTGTCTTCTCTTTATTTCCCCATTCCTTTATCGCTGCTGCCATTGATGAAGAATCTGATTCTGATCAGGCTCGAGAAGGAGGAGAAGAAGAAGAAGAAGAAAAGGAAGAAGCTGGAATTTGTAGAGGTGACTTATTAGAGGAAGAATTAGAAGAAGATGATGGGTGTTTTACAGATGAGGTTGAAGAAGAAGAAGAAGATCAAAAAGAAGGAAAAAGGAGAGAATTAGAGATAGTGGTGAGTACAGAGGAATTGAACAAGAAAATTGAAGACTTTATTAGAAAAATGAAGGAGGAAATGAGGATTGAAGCAGCTCAAACTCACCTCATTGCTGTGTAA
Protein sequence
MEQHSNESSFNLNNYDDIFRTSSSKNCSSKVEWLKRMVKLIVFCLVLGLFFSVFSLFPHSFIAAAIDEESDSDQAREGGEEEEEEKEEAGICRGDLLEEELEEDDGCFTDEVEEEEEDQKEGKRRELEIVVSTEELNKKIEDFIRKMKEEMRIEAAQTHLIAV
Homology
BLAST of PI0009913 vs. ExPASy TrEMBL
Match:
A0A0A0LVQ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173190 PE=4 SV=1)
HSP 1 Score: 141.4 bits (355), Expect = 3.4e-30
Identity = 104/212 (49.06%), Postives = 118/212 (55.66%), Query Frame = 0
Query: 1 MEQHSNESSFNLNNYDDIFR-TSSSKNCSSKVEWLKRMVKLIVFCLVLGLFFSVFSLFPH 60
MEQH +ESS NLNNYD IFR TSSSKNCSSKVEWLKRMVKL VFCL+LGLFFS+FSLFPH
Sbjct: 1 MEQHLSESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPH 60
Query: 61 SF---------------------------------------------------------- 120
SF
Sbjct: 61 SFSVYFSTFLFSILTHAVERKYMFLICNIGILFLLATSSVSSSSSSSSFGNYCPFPHSRH 120
Query: 121 ------------IAAAIDEESDSDQAREGGEEEEEEKEEAGICRGDLLEEELEEDDGCFT 142
A A DEESDSD +EEEEEKEE GICRG+LLEEELEED+GCFT
Sbjct: 121 NHHHNLFEHDVVAAVATDEESDSDHT----QEEEEEKEE-GICRGELLEEELEEDEGCFT 180
BLAST of PI0009913 vs. ExPASy TrEMBL
Match:
A0A6J1CN51 (nardilysin-like OS=Momordica charantia OX=3673 GN=LOC111012652 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 2.6e-17
Identity = 96/218 (44.04%), Postives = 123/218 (56.42%), Query Frame = 0
Query: 1 MEQHSN----ESSFNLNNYDDIFRTSSSKNCSSKVEWLKRMVKLI----VFCLVLGLFFS 60
ME+H +SS +L N D + RT N SSKV+ LK MVK + VFCLV+ LF S
Sbjct: 1 MEEHPQAKDLDSSESL-NLDGMCRT----NWSSKVQRLKGMVKFVVSVCVFCLVVALFLS 60
Query: 61 VFSLFPHSF-----------------------------IAAAIDEESDS-----DQAREG 120
+FSLFPHSF +A + + S+S + RE
Sbjct: 61 LFSLFPHSFTLYFSLFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNSIPHHHYELREE 120
Query: 121 GEEEEEEKEE---AGICRGDLLEE-------ELEEDDGCFTDEVEEEEEDQKEGKRRELE 164
+EEE E ++ + I DL E E+D+GCFTDEVEEEEE+++ + ELE
Sbjct: 121 EKEEEVEDDDDDTSAIHSADLAAVGPTSPIIEEEDDEGCFTDEVEEEEEEEEGKRSEELE 180
BLAST of PI0009913 vs. ExPASy TrEMBL
Match:
A0A6J1EH25 (X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111434039 PE=4 SV=1)
HSP 1 Score: 98.2 bits (243), Expect = 3.3e-17
Identity = 101/245 (41.22%), Postives = 121/245 (49.39%), Query Frame = 0
Query: 9 SFNLNNYD--DIFRTSSSKNCSSKVEWLKRMVKLI----VFCLVLGLFFSVFSLFPHSF- 68
+ N+++Y+ D+ RTSS+ N VE LKRMVK I VF LVL LFFS FSLFPHSF
Sbjct: 7 AINMDSYESLDLDRTSSTNN---NVERLKRMVKFIVSICVFSLVLALFFSFFSLFPHSFT 66
Query: 69 ------------------------------------------------------------ 128
Sbjct: 67 VYFSTFLFSLLNHGMERKFMFLICNGILFLLATSSVLQDSSPSSSSSSSSSSFGYSSFSH 126
Query: 129 -----------IAAAID-EESDSDQAREGGEEEEEEKEEAGICRGDLLE----------E 164
+A A D +SD + +E E E+E ++E D E E
Sbjct: 127 SVHHDQFEHDLVADASDGYDSDESEEQEHEEHEDEHEDEHEDEHEDEHEDEHEDEHEEQE 186
BLAST of PI0009913 vs. ExPASy TrEMBL
Match:
A0A6P5WEK0 (histone chaperone ASF1-like OS=Durio zibethinus OX=66656 GN=LOC111274066 PE=4 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 3.8e-05
Identity = 47/99 (47.47%), Postives = 60/99 (60.61%), Query Frame = 0
Query: 68 EESDSDQAREGGEEEEEEKEEAGICRGDLLEEELEEDDGCFTDEVEEEEEDQKEGKRREL 127
EE + ++ E EEEE E E A I D + GCF ++E+Q+EG E+
Sbjct: 14 EEEEEEEEEEEEEEEERESEVAVIVEDD------GGESGCFV-----KQEEQQEGVEAEV 73
Query: 128 ---EIVVSTEELNKKIEDFIRKMKEEMRIEAAQTHLIAV 164
E V STE+LN+K E+FIRKMKEE+RIEA Q HLIAV
Sbjct: 74 GANEEVTSTEDLNRKFEEFIRKMKEEIRIEAQQQHLIAV 101
BLAST of PI0009913 vs. ExPASy TrEMBL
Match:
A0A1S8AE58 (Uncharacterized protein OS=Citrus limon OX=2708 PE=4 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 2.5e-04
Identity = 45/92 (48.91%), Postives = 61/92 (66.30%), Query Frame = 0
Query: 69 ESDSDQAREGGEEEEEEKEEAGICRGDLLEEELEEDDGCFTDEVEE---EEEDQKEGKRR 128
++++++ RE E+E+EE EE + EEE E + F DEVEE EEE+++E +
Sbjct: 177 KTETEETRE--EQEKEEAEEESALLEEDGEEEAEAESSFFIDEVEEGEGEEEEEEEEEEE 236
Query: 129 ELEIVVSTEELNKKIEDFIRKMKEEMRIEAAQ 158
E +S EELNKK EDFIRKMKEE+RIEA Q
Sbjct: 237 EGNGKLSDEELNKKFEDFIRKMKEELRIEARQ 266
BLAST of PI0009913 vs. NCBI nr
Match:
XP_031736046.1 (uncharacterized protein LOC105434473 [Cucumis sativus] >KAE8652832.1 hypothetical protein Csa_022756 [Cucumis sativus])
HSP 1 Score: 205.3 bits (521), Expect = 4.0e-49
Identity = 142/238 (59.66%), Postives = 149/238 (62.61%), Query Frame = 0
Query: 1 MEQHSNESSFNLNNYDDIFR-TSSSKNCSSKVEWLKRMVKLIVFCLVLGLFFSVFSLFPH 60
MEQH +ESS NLNNYD IFR TSSSKNCSSKVEWLKRMVKL VFCL+LGLFFS+FSLFPH
Sbjct: 1 MEQHLSESSLNLNNYDVIFRSTSSSKNCSSKVEWLKRMVKLTVFCLLLGLFFSLFSLFPH 60
Query: 61 SF---------------------------------------------------------- 120
SF
Sbjct: 61 SFSVYFSTFLFSILTHAVERKYMFLICNIGILFLLATSSVSSSSSSSSFGNYCPFPHSRH 120
Query: 121 ------------IAAAIDEESDSDQAREGGEEEEEEKEEAGICRGDLLEEELEEDDGCFT 164
A A DEESDSD +EEEEEKEE GICRG+LLEEELEED+GCFT
Sbjct: 121 NHHHNLFEHDVVAAVATDEESDSDHT----QEEEEEKEE-GICRGELLEEELEEDEGCFT 180
BLAST of PI0009913 vs. NCBI nr
Match:
XP_038877796.1 (glutamic acid-rich protein-like [Benincasa hispida])
HSP 1 Score: 134.8 bits (338), Expect = 6.7e-28
Identity = 106/227 (46.70%), Postives = 122/227 (53.74%), Query Frame = 0
Query: 6 NESSFNLNNYDDIFRTSSSK-NCSSKVEWLKRMVKLIVFCLVLGLFFSVFSLFPHSF--- 65
+ S NL + DD RTSS NC SKVE L RMVK VF LVL LFFS FSLFPHSF
Sbjct: 12 SNQSLNLYDDDDDIRTSSKDYNCCSKVEMLIRMVKFTVFSLVLALFFSFFSLFPHSFSVY 71
Query: 66 ------------------------------------------------------------ 125
Sbjct: 72 FSTFMFSLLNHAMERKYMFLICNGILFLLATSSVIEDSSSSSSSFGTCSFNSHSDHHHHH 131
Query: 126 -----IAAAIDEESDSDQAREGGEEEEEEKEEAGICRGDLLEEELEEDDGCFTDEVEEEE 164
+ AAID + ++ EEEEEE+EE D LEEE+EED+GCFTDEVE+++
Sbjct: 132 QLEHDLVAAIDGSDSEESVQQNQEEEEEEEEE---IHRDELEEEMEEDEGCFTDEVEDDD 191
BLAST of PI0009913 vs. NCBI nr
Match:
KAG7019366.1 (hypothetical protein SDJN02_18326, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 100.9 bits (250), Expect = 1.1e-17
Identity = 97/235 (41.28%), Postives = 118/235 (50.21%), Query Frame = 0
Query: 9 SFNLNNYD--DIFRTSSSKNCSSKVEWLKRMVKLI----VFCLVLGLFFSVFSLFPHSF- 68
+ N+++Y+ D+ RTSS+ N VE LKRMVK I VF LVL LFFS FSLFPHSF
Sbjct: 7 AINMDSYESLDLDRTSSTSN---NVERLKRMVKFIVSICVFSLVLALFFSFFSLFPHSFT 66
Query: 69 ------------------------------------------------------------ 128
Sbjct: 67 VYFSTFLFSLLNHGMERKFMFLICNGILFLLATSSVLQDASPSSSSSSSSSFGYCSFSHS 126
Query: 129 ---------IAAAIDEESDSDQAREGGEEEEEEKEEAGICRGDLLEEELEEDDGCFTDEV 164
+ A + DSD++ E E+E E E +EE EED+GCFT+EV
Sbjct: 127 VHHDQFEHDLVADASDGYDSDESEEQEHEDEHEDEHEDEHEE---QEEDEEDEGCFTEEV 186
BLAST of PI0009913 vs. NCBI nr
Match:
KAG6583719.1 (hypothetical protein SDJN03_19651, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 99.0 bits (245), Expect = 4.0e-17
Identity = 98/239 (41.00%), Postives = 120/239 (50.21%), Query Frame = 0
Query: 11 NLNNYD--DIFRTSSSKNCSSKVEWLKRMVKLI----VFCLVLGLFFSVFSLFPHSF--- 70
N+++Y+ D+ RTSS+ N VE LKRMVK I VF LVL LFFS FS+FPHSF
Sbjct: 9 NMDSYESLDLDRTSSTSN---NVERLKRMVKFIVSICVFSLVLALFFSFFSVFPHSFTVY 68
Query: 71 ------------------------------------------------------------ 130
Sbjct: 69 FSTFLFSLLNHGMERKFMFLICNGILFLLATSSVLQDASPSSSSSSSSSFGYCSFSHSVH 128
Query: 131 --------IAAAID----EESDSDQAREGGEEEEEEKEEAGICRGDLLEEELEEDDGCFT 164
+A A D +ES+ + E +E E+E EE +EE EED+GCFT
Sbjct: 129 HDQFEHDLVADASDGYDSDESEEQEHEEHEDEHEDEHEE---------QEEDEEDEGCFT 188
BLAST of PI0009913 vs. NCBI nr
Match:
XP_022142572.1 (nardilysin-like [Momordica charantia])
HSP 1 Score: 98.6 bits (244), Expect = 5.3e-17
Identity = 96/218 (44.04%), Postives = 123/218 (56.42%), Query Frame = 0
Query: 1 MEQHSN----ESSFNLNNYDDIFRTSSSKNCSSKVEWLKRMVKLI----VFCLVLGLFFS 60
ME+H +SS +L N D + RT N SSKV+ LK MVK + VFCLV+ LF S
Sbjct: 1 MEEHPQAKDLDSSESL-NLDGMCRT----NWSSKVQRLKGMVKFVVSVCVFCLVVALFLS 60
Query: 61 VFSLFPHSF-----------------------------IAAAIDEESDS-----DQAREG 120
+FSLFPHSF +A + + S+S + RE
Sbjct: 61 LFSLFPHSFTLYFSLFSLLNHALDRNYMFLLCNGILLLLATSPLQHSNSIPHHHYELREE 120
Query: 121 GEEEEEEKEE---AGICRGDLLEE-------ELEEDDGCFTDEVEEEEEDQKEGKRRELE 164
+EEE E ++ + I DL E E+D+GCFTDEVEEEEE+++ + ELE
Sbjct: 121 EKEEEVEDDDDDTSAIHSADLAAVGPTSPIIEEEDDEGCFTDEVEEEEEEEEGKRSEELE 180
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LVQ2 | 3.4e-30 | 49.06 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173190 PE=4 SV=1 | [more] |
A0A6J1CN51 | 2.6e-17 | 44.04 | nardilysin-like OS=Momordica charantia OX=3673 GN=LOC111012652 PE=4 SV=1 | [more] |
A0A6J1EH25 | 3.3e-17 | 41.22 | X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like OS=Cuc... | [more] |
A0A6P5WEK0 | 3.8e-05 | 47.47 | histone chaperone ASF1-like OS=Durio zibethinus OX=66656 GN=LOC111274066 PE=4 SV... | [more] |
A0A1S8AE58 | 2.5e-04 | 48.91 | Uncharacterized protein OS=Citrus limon OX=2708 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_031736046.1 | 4.0e-49 | 59.66 | uncharacterized protein LOC105434473 [Cucumis sativus] >KAE8652832.1 hypothetica... | [more] |
XP_038877796.1 | 6.7e-28 | 46.70 | glutamic acid-rich protein-like [Benincasa hispida] | [more] |
KAG7019366.1 | 1.1e-17 | 41.28 | hypothetical protein SDJN02_18326, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6583719.1 | 4.0e-17 | 41.00 | hypothetical protein SDJN03_19651, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022142572.1 | 5.3e-17 | 44.04 | nardilysin-like [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |