PI0009777 (gene) Melon (PI 482460) v1

Overview
NamePI0009777
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 10093356 .. 10094494 (+)
RNA-Seq ExpressionPI0009777
SyntenyPI0009777
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACTCGACGACTGGGAAGTCCTCGACTGCCATGAAGATCATGAAGAGAAAAGGCACGAAGACCTAGTAATTTCCGGCCAGAAGTTGATCGGTGACACGAAAAAGGAGTTGGAAACCGTCGCGGAGTTTGATGTCGAGGAAGAGGAAAAGGTGAATTCAAGAGGAGGGATGGATATGGCGATGGAGAAAAGGAAACAATGGGGGAGAACGGTTGTTTGTTCGTTTGGAATTGCTGTGGCGGCTACGATCTGTAGTGTGTTGTTGGGAAGCCATAGCCACCACCATGGGGGAGGTGCGTTTGTGAATAAACGCCATTGTTGAACGTCGAATACTACAATAGGTTTTTATTTACAAATCAAACTAGCAAAGCATGTATAATTTTGTACTCTCTCGTTACCTTTTTTTTTCTTGGCGATTAGTTTTCTATTAATTATTATTCCCATAGTTGCTGGAGATTACAATGATGGATCAATAGTAATGAAATTGGATTAATGGATCATTCGTAATGGATCTTAATTGTAAACGTTGTTTGATGGCTTTTGATCGTGTTTATCTAACTATTTTGCAAACGTAATCGATCTTTTTTACCTTTACAATTATTGTTATGTTTAGGGTCAGATGGTAATGTTAATGAAATCGGATTAATGGATCGTTCGTAATGAATCTCAATTGCAAACATAGTTTGATGGCTTTTGACCATGTTTATCTAAATATTTTGCAAACGTAATCTGTTTTTCTTACCTTTACACAGTTATTCTTATGTTTAGGGTCAAATGGTAACGATAACAATAATTATGACGTTTTCATATTTCTCTTGCTGATTTTCATAATTACCATTTGACAACAGGTAATGATAACAATACTTTGATGTAATTTTCAATTGTTGGATTGACTACCTTTGGTTGCTCAATCAGATTGTGGGTTTTGATTACAGACTTAAAAATAGGCACCATATCTCATTATGATTATGAAACACTGATATAATAGCCACTGCATTGTTAAAGTTCATCGAAGAAAAAATAGCACAAAACAAAATAATGACATGCAACCAAACGAAAGATTTTGAAAAAGAAAAATTCATTTTTAGACATTATACACTAAACAAAACATTGAGTGTATCTTTTATCATATTCGTG

mRNA sequence

ATGGGACTCGACGACTGGGAAGTCCTCGACTGCCATGAAGATCATGAAGAGAAAAGGCACGAAGACCTAGTAATTTCCGGCCAGAAGTTGATCGGTGACACGAAAAAGGAGTTGGAAACCGTCGCGGAGTTTGATGTCGAGGAAGAGGAAAAGGTGAATTCAAGAGGAGGGATGGATATGGCGATGGAGAAAAGGAAACAATGGGGGAGAACGGTTGTTTGTTCGTTTGGAATTGCTGTGGCGGCTACGATCTGTAGTGTGTTGTTGGGAAGCCATAGCCACCACCATGGGGGAGGTAATGATAACAATACTTTGATGTAATTTTCAATTGTTGGATTGACTACCTTTGGTTGCTCAATCAGATTGTGGGTTTTGATTACAGACTTAAAAATAGGCACCATATCTCATTATGATTATGAAACACTGATATAATAGCCACTGCATTGTTAAAGTTCATCGAAGAAAAAATAGCACAAAACAAAATAATGACATGCAACCAAACGAAAGATTTTGAAAAAGAAAAATTCATTTTTAGACATTATACACTAAACAAAACATTGAGTGTATCTTTTATCATATTCGTG

Coding sequence (CDS)

ATGGGACTCGACGACTGGGAAGTCCTCGACTGCCATGAAGATCATGAAGAGAAAAGGCACGAAGACCTAGTAATTTCCGGCCAGAAGTTGATCGGTGACACGAAAAAGGAGTTGGAAACCGTCGCGGAGTTTGATGTCGAGGAAGAGGAAAAGGTGAATTCAAGAGGAGGGATGGATATGGCGATGGAGAAAAGGAAACAATGGGGGAGAACGGTTGTTTGTTCGTTTGGAATTGCTGTGGCGGCTACGATCTGTAGTGTGTTGTTGGGAAGCCATAGCCACCACCATGGGGGAGGTAATGATAACAATACTTTGATGTAA

Protein sequence

MGLDDWEVLDCHEDHEEKRHEDLVISGQKLIGDTKKELETVAEFDVEEEEKVNSRGGMDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGGNDNNTLM
Homology
[Close]
BLAST of PI0009777 vs. ExPASy TrEMBL
Match: A0A0A0LG95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842740 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.9e-43
Identity = 88/102 (86.27%), Postives = 97/102 (95.10%), Query Frame = 0 

Query: 1   MGLDDWEVLDCHEDHEEKR---HEDLVISGQKLIGDTKKELETVAEFDVEEEEKVNSRGG 60
           MGLDDWE+LDCHEDH++++   HE++VISGQKLIGDTK E+E VAEFDVEEEEKV+SRGG
Sbjct: 1   MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGG 60

Query: 61  MDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGG 100
           MDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGG
Sbjct: 61  MDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGG 102

[Close]
BLAST of PI0009777 vs. ExPASy TrEMBL
Match: A0A5D3D5E0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00740 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.0e-38
Identity = 86/100 (86.00%), Postives = 90/100 (90.00%), Query Frame = 0 

Query: 1   MGLDDWEVLDCHEDHEEK-RHEDLVISGQKLIGDTKKELETVAEFDVEEEEKVNSRGGMD 60
           MGLDDWE+LDCHED EEK RHE+ VISGQKLI DTKKELE VAEF+VEEEEK NSR GMD
Sbjct: 1   MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD 60

Query: 61  MAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGG 100
           MA EK+KQ GR VVCSFGIAVAATICSVLLGSHSHHHGGG
Sbjct: 61  MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGG 100

[Close]
BLAST of PI0009777 vs. NCBI nr
Match: KGN59752.1 (hypothetical protein Csa_001232 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 8.1e-43
Identity = 88/102 (86.27%), Postives = 97/102 (95.10%), Query Frame = 0 

Query: 1   MGLDDWEVLDCHEDHEEKR---HEDLVISGQKLIGDTKKELETVAEFDVEEEEKVNSRGG 60
           MGLDDWE+LDCHEDH++++   HE++VISGQKLIGDTK E+E VAEFDVEEEEKV+SRGG
Sbjct: 1   MGLDDWELLDCHEDHDQEKSRPHENVVISGQKLIGDTKNEMEAVAEFDVEEEEKVDSRGG 60

Query: 61  MDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGG 100
           MDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGG
Sbjct: 61  MDMAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGG 102

[Close]
BLAST of PI0009777 vs. NCBI nr
Match: KAA0057194.1 (hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa] >TYK18767.1 hypothetical protein E5676_scaffold257G00740 [Cucumis melo var. makuwa])

HSP 1 Score: 169.1 bits (427), Expect = 2.1e-38
Identity = 86/100 (86.00%), Postives = 90/100 (90.00%), Query Frame = 0 

Query: 1   MGLDDWEVLDCHEDHEEK-RHEDLVISGQKLIGDTKKELETVAEFDVEEEEKVNSRGGMD 60
           MGLDDWE+LDCHED EEK RHE+ VISGQKLI DTKKELE VAEF+VEEEEK NSR GMD
Sbjct: 1   MGLDDWELLDCHEDREEKSRHENEVISGQKLIADTKKELEIVAEFEVEEEEKENSRRGMD 60

Query: 61  MAMEKRKQWGRTVVCSFGIAVAATICSVLLGSHSHHHGGG 100
           MA EK+KQ GR VVCSFGIAVAATICSVLLGSHSHHHGGG
Sbjct: 61  MATEKKKQRGRAVVCSFGIAVAATICSVLLGSHSHHHGGG 100

The following BLAST results are available for this feature:
BLAST of PI0009777 vs.
Match NameE-valueIdentityDescription
BLAST of PI0009777 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG953.9e-4386.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842740 PE=4 SV=1[more]
A0A5D3D5E01.0e-3886.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of PI0009777 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59752.18.1e-4386.27hypothetical protein Csa_001232 [Cucumis sativus][more]
KAA0057194.12.1e-3886.00hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa] >TYK1876... [more]
BLAST of PI0009777 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0009777.1PI0009777.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane