PI0009721 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGATTTTTATTTTTATTTTTAAAAAGATATTTTGGAATTTATTTTTCTACGTCAATTTTGTTCCTAATGATAAATAAATCCTCTTTGGAAAAGGAAAAAAAGAAAATAGAGTGACAAAATAAATAAATCAAAAACTTCTTCAAGTTTAATTCAAATTAATAGCGTCAAAGAGAATCAAAGTAGAAAAGGAAAAGCTTCATTTGATCGATGGATTTGAAAGGGTAGGCGCGTGTTATGATATGAAGATTGAAGAACAAAGCATTTTGATTATTATAATAATTATTATTATTATTTAGTACTTCAATTTTACAGCTTCGAATTGAAAATCCAATCATTCTCTCCCACTTTTTTTTTTTTTTGCTTTTAATTGATATTCTTCATCGGAGCAAACAGAGTGGTAGGTGAAGATTTCTCTTTCTTTGGATCGTAAGATTAGATCCTTTCTTTCTCTCTTCTTCGTCTCAATTTGAAGAACGAGTTTGAACAATTTCGAGTAGATGTCCCCGTCGAATAGTTCAGCTAGTGGAGTTACTGGACATGGAGGATCGAATTACATAGAGCATCAAATTTCTAGAATGGATACTCTCGCCGGAATCGCCATTAAGTATGGAGTCGAGGTAAACTTTCGTTTTTTCCTTTTGTTTCATCAAAATTTCGTACGTTGTTCTGTCGGTGTGGTTTTTTCCCTTTCCTTCTCTTCGATTGAGTTGACTTGATTCGATTTTGTGAGGTCTGGAAAATCAGTGTCTTAAGATTTTGTTGTTATCTCTGGATGGAAGCGAATTGAAGTTCTTAATTTAGATTCATTTTTTGGAGTGATTTCACCACGTCTATCAAACTTTATTCCAATTGTTGCATATGTGTATTGTGATGATAATGTTTAATTGGGAGTTTGATTGAATCTATATGTTCAGTTTCGTTTGGAAACTCAGAATGTTTAATGTTAGGGCGAAATATTTTTGTGTTTTTGTATATCCAATTCCATTAGCTGTGCTTCTCTACTGGATGTACTTTAACAGTGTTCTGTTGCCCCAAATAGATATCTTCAGCTCTGAACTTCATCGGTTCGGAGGTTACTTTTGGTCGATTGCATTTGGCTGAGGGGCAAAGATGATGAAGCCAAACAATAGAAAGTTCGTATTGTATTTTATTTGTTCATAGTCTTGTTAACTAAAATGCCTCGGTGTCGGGATGAATAATTGATTATTCTTTATTTTCCATTCTATCTCGCTCGCTGAAGTTCCCTTCATATTCTTTTAGTTCATAAAATTCTAGCTAGGTTGTTAGCAGAAATTTGTTTGAACAATCATATCCTTAGGGTTGATCTTAGACTCATTAATCTATTTGTGATTTAATTGGTGGTTTACCCTTAATTTCATTCCTTACTGATGCTCTAAAACGTATAGGTGGCTGACATTAGGAGATTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAACTGAGAATTCCTCTACCAGGCAGGCATCCACCATCACCCAGCGTGTCCGATGCTTCTGCTGTTACGGGGTATTTCTCGTTGTCAATTTCTGGTAGAATTTATATCATTCTGTGGACTGTAATTAAGCTTTTAGCTTGTTTATGTTTGCTGCTCATACCTCAAAACTAAAGTGTGTCTTAGTCCAGTCCGCCGATGCGCTGTTTTAAGCAAATTTAGTATAGATACATTGAGGCTGCGGTTAGGGGTGGGAAATGAGAAACTTGGGAAGCTTGTTGTTGCATATTTACAATCGTGGAACAAATCATGTGCGGAGTTTATTTTAATCTATAGTTATATACATGTATTGTAGGATTATGACAGCCATCTAAGTCCCCCAAGCAACTTAAGTTGCAATGAACTGTGCATTAGTTTTAGCGATTAGATTCAGATTATTTTGCTGGAGTTATATAAATCATTATGCATAATTAGAGCATTTACCATGTTGATATTCATTGCACAAAATTAGAACCCCCCTCCATGGACTGTTTAAGTTTTATCTAATGGATTTTTCCAAATGTATTGCAGAAATGGATCTGTAAATGAAGAACCTCTACATTTAGGCCAACCTACTAATATGCTAAACTCTTTGCAATCCTGGAGATTGAAATCACCAAACCAAAAAGCCTCCCCTGCCATGAGCACATTGCAAAAATATTATGGTCTAAGTTCACAAACTCTCGAGACCTCGTCAGTAGACATGGAGATGTCTGTATACAGAACTGAAAATTCAAATTCCATGTGCGATGGGTTGTTTTCCAGAACCTCTGTACTCTCTACACCACCTCCAAACATTTACTCGAAGACCAGGAAATATGCTGGTAGTTTCTGGACTGAGAATGACTCAATAACCGAGCATCTATTACGTACAGATTCTGGAGATGGAGAGAGTGAGAAATCTGATGAGAAATTAGTTCGAAGGCGTCAAAAGGCTGAAGTCGACAATGGTGTTACCACCACAGAGAGATCGCTGAAGGGCGAAAATAGCAATGGGAACTATTTTTCTCCTTCAAATGGAAAGAGTTTAGCCATGAGGCTAAAATCGGTTAGTAGAACTGTTCTGTTATCAGATTCAGATCCAGTGAGGATAAATTCGATTCCAGTAGGATTAGGAGATGATATAATTACTGATGGAACTTCTGAAGTTCATAAATCATTAAGTACATCAAACCTGAGAGACCAAGATAACAGCAATTCAACATCTGTATGGTCAACTGCAAAGTGGAGTTTGAAGCCAGACTTGCAAGCTCTCTCAAGTGTTGCTATCGCAAAACCATTGTTTGATGGTTTGCCAAATCCAATCACAGGCCGCAGGAACAAAGCTGCTCTTGATTAACCATGTTCATAACTCTGTTCATATTCGTGTTCGTCGAACTGCTTTGATTCATTCGTTTGGGCCGGAAATTCTTTTGGAAGTGTTGTTACAGGAATGTATAGGTAGGAAGGCAAAATAAGAGATTGACGTTTAAGGAAGTTGATATTAGTAAATACTACCACCAAAATATATATTTTTTTTGTCAAAGATTTGAGGTCTGGTGTAAGTGGCATTAGCTACATCTTGAGAAGTACTTTCATTTGTACTTAAGATTATTCGTTTTCATTAACTTTCCAAGAAAAATACAGCCTTTCATAAATATGGATGAGTGATGTCACTTTAATATTCA GCGATTTTTATTTTTATTTTTAAAAAGATATTTTGGAATTTATTTTTCTACGTCAATTTTGTTCCTAATGATAAATAAATCCTCTTTGGAAAAGGAAAAAAAGAAAATAGAGTGACAAAATAAATAAATCAAAAACTTCTTCAAGTTTAATTCAAATTAATAGCGTCAAAGAGAATCAAAGTAGAAAAGGAAAAGCTTCATTTGATCGATGGATTTGAAAGGGTAGGCGCGTGTTATGATATGAAGATTGAAGAACAAAGCATTTTGATTATTATAATAATTATTATTATTATTTAGTACTTCAATTTTACAGCTTCGAATTGAAAATCCAATCATTCTCTCCCACTTTTTTTTTTTTTTGCTTTTAATTGATATTCTTCATCGGAGCAAACAGAGTGGTAGGTGAAGATTTCTCTTTCTTTGGATCGTAAGATTAGATCCTTTCTTTCTCTCTTCTTCGTCTCAATTTGAAGAACGAGTTTGAACAATTTCGAGTAGATGTCCCCGTCGAATAGTTCAGCTAGTGGAGTTACTGGACATGGAGGATCGAATTACATAGAGCATCAAATTTCTAGAATGGATACTCTCGCCGGAATCGCCATTAAGTATGGAGTCGAGGTGGCTGACATTAGGAGATTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAACTGAGAATTCCTCTACCAGGCAGGCATCCACCATCACCCAGCGTGTCCGATGCTTCTGCTGTTACGGGAAATGGATCTGTAAATGAAGAACCTCTACATTTAGGCCAACCTACTAATATGCTAAACTCTTTGCAATCCTGGAGATTGAAATCACCAAACCAAAAAGCCTCCCCTGCCATGAGCACATTGCAAAAATATTATGGTCTAAGTTCACAAACTCTCGAGACCTCGTCAGTAGACATGGAGATGTCTGTATACAGAACTGAAAATTCAAATTCCATGTGCGATGGGTTGTTTTCCAGAACCTCTGTACTCTCTACACCACCTCCAAACATTTACTCGAAGACCAGGAAATATGCTGGTAGTTTCTGGACTGAGAATGACTCAATAACCGAGCATCTATTACGTACAGATTCTGGAGATGGAGAGAGTGAGAAATCTGATGAGAAATTAGTTCGAAGGCGTCAAAAGGCTGAAGTCGACAATGGTGTTACCACCACAGAGAGATCGCTGAAGGGCGAAAATAGCAATGGGAACTATTTTTCTCCTTCAAATGGAAAGAGTTTAGCCATGAGGCTAAAATCGGTTAGTAGAACTGTTCTGTTATCAGATTCAGATCCAGTGAGGATAAATTCGATTCCAGTAGGATTAGGAGATGATATAATTACTGATGGAACTTCTGAAGTTCATAAATCATTAAGTACATCAAACCTGAGAGACCAAGATAACAGCAATTCAACATCTGTATGGTCAACTGCAAAGTGGAGTTTGAAGCCAGACTTGCAAGCTCTCTCAAGTGTTGCTATCGCAAAACCATTGTTTGATGGTTTGCCAAATCCAATCACAGGCCGCAGGAACAAAGCTGCTCTTGATTAACCATGTTCATAACTCTGTTCATATTCGTGTTCGTCGAACTGCTTTGATTCATTCGTTTGGGCCGGAAATTCTTTTGGAAGTGTTGTTACAGGAATGTATAGGTAGGAAGGCAAAATAAGAGATTGACGTTTAAGGAAGTTGATATTAGTAAATACTACCACCAAAATATATATTTTTTTTGTCAAAGATTTGAGGTCTGGTGTAAGTGGCATTAGCTACATCTTGAGAAGTACTTTCATTTGTACTTAAGATTATTCGTTTTCATTAACTTTCCAAGAAAAATACAGCCTTTCATAAATATGGATGAGTGATGTCACTTTAATATTCA ATGTCCCCGTCGAATAGTTCAGCTAGTGGAGTTACTGGACATGGAGGATCGAATTACATAGAGCATCAAATTTCTAGAATGGATACTCTCGCCGGAATCGCCATTAAGTATGGAGTCGAGGTGGCTGACATTAGGAGATTGAATGGCTTGGCAGCAGATCTTCAAATGTTTGCTTTGAAGAAACTGAGAATTCCTCTACCAGGCAGGCATCCACCATCACCCAGCGTGTCCGATGCTTCTGCTGTTACGGGAAATGGATCTGTAAATGAAGAACCTCTACATTTAGGCCAACCTACTAATATGCTAAACTCTTTGCAATCCTGGAGATTGAAATCACCAAACCAAAAAGCCTCCCCTGCCATGAGCACATTGCAAAAATATTATGGTCTAAGTTCACAAACTCTCGAGACCTCGTCAGTAGACATGGAGATGTCTGTATACAGAACTGAAAATTCAAATTCCATGTGCGATGGGTTGTTTTCCAGAACCTCTGTACTCTCTACACCACCTCCAAACATTTACTCGAAGACCAGGAAATATGCTGGTAGTTTCTGGACTGAGAATGACTCAATAACCGAGCATCTATTACGTACAGATTCTGGAGATGGAGAGAGTGAGAAATCTGATGAGAAATTAGTTCGAAGGCGTCAAAAGGCTGAAGTCGACAATGGTGTTACCACCACAGAGAGATCGCTGAAGGGCGAAAATAGCAATGGGAACTATTTTTCTCCTTCAAATGGAAAGAGTTTAGCCATGAGGCTAAAATCGGTTAGTAGAACTGTTCTGTTATCAGATTCAGATCCAGTGAGGATAAATTCGATTCCAGTAGGATTAGGAGATGATATAATTACTGATGGAACTTCTGAAGTTCATAAATCATTAAGTACATCAAACCTGAGAGACCAAGATAACAGCAATTCAACATCTGTATGGTCAACTGCAAAGTGGAGTTTGAAGCCAGACTTGCAAGCTCTCTCAAGTGTTGCTATCGCAAAACCATTGTTTGATGGTTTGCCAAATCCAATCACAGGCCGCAGGAACAAAGCTGCTCTTGATTAA MSPSNSSASGVTGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALKKLRIPLPGRHPPSPSVSDASAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPAMSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSMCDGLFSRTSVLSTPPPNIYSKTRKYAGSFWTENDSITEHLLRTDSGDGESEKSDEKLVRRRQKAEVDNGVTTTERSLKGENSNGNYFSPSNGKSLAMRLKSVSRTVLLSDSDPVRINSIPVGLGDDIITDGTSEVHKSLSTSNLRDQDNSNSTSVWSTAKWSLKPDLQALSSVAIAKPLFDGLPNPITGRRNKAALD Homology
BLAST of PI0009721 vs. ExPASy Swiss-Prot
Match: Q6P606 (LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Danio rerio OX=7955 GN=lysmd4 PE=2 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 2.7e-05 Identity = 44/156 (28.21%), Postives = 74/156 (47.44%), Query Frame = 0
BLAST of PI0009721 vs. ExPASy Swiss-Prot
Match: Q6DEF4 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Danio rerio OX=7955 GN=lysmd2 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.8e-04 Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of PI0009721 vs. ExPASy Swiss-Prot
Match: Q3B7I8 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=lysmd2 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.8e-04 Identity = 27/63 (42.86%), Postives = 36/63 (57.14%), Query Frame = 0
BLAST of PI0009721 vs. ExPASy Swiss-Prot
Match: A0JNI1 (LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Bos taurus OX=9913 GN=LYSMD1 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04 Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 0
BLAST of PI0009721 vs. ExPASy Swiss-Prot
Match: Q99LE3 (LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Mus musculus OX=10090 GN=Lysmd3 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 4.0e-04 Identity = 29/83 (34.94%), Postives = 42/83 (50.60%), Query Frame = 0
BLAST of PI0009721 vs. ExPASy TrEMBL
Match: A0A5D3BJ15 (Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002680 PE=4 SV=1) HSP 1 Score: 652.1 bits (1681), Expect = 1.3e-183 Identity = 339/352 (96.31%), Postives = 345/352 (98.01%), Query Frame = 0
BLAST of PI0009721 vs. ExPASy TrEMBL
Match: A0A1S3CUG8 (uncharacterized protein LOC103504667 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504667 PE=4 SV=1) HSP 1 Score: 652.1 bits (1681), Expect = 1.3e-183 Identity = 339/352 (96.31%), Postives = 345/352 (98.01%), Query Frame = 0
BLAST of PI0009721 vs. ExPASy TrEMBL
Match: A0A0A0LQZ4 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043110 PE=4 SV=1) HSP 1 Score: 647.5 bits (1669), Expect = 3.2e-182 Identity = 339/352 (96.31%), Postives = 342/352 (97.16%), Query Frame = 0
BLAST of PI0009721 vs. ExPASy TrEMBL
Match: A0A6J1K4A2 (uncharacterized protein LOC111490532 OS=Cucurbita maxima OX=3661 GN=LOC111490532 PE=4 SV=1) HSP 1 Score: 555.4 bits (1430), Expect = 1.7e-154 Identity = 295/354 (83.33%), Postives = 321/354 (90.68%), Query Frame = 0
BLAST of PI0009721 vs. ExPASy TrEMBL
Match: A0A6J1C8W2 (uncharacterized protein LOC111009048 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009048 PE=4 SV=1) HSP 1 Score: 553.5 bits (1425), Expect = 6.3e-154 Identity = 294/353 (83.29%), Postives = 313/353 (88.67%), Query Frame = 0
BLAST of PI0009721 vs. NCBI nr
Match: XP_008467281.1 (PREDICTED: uncharacterized protein LOC103504667 isoform X1 [Cucumis melo] >TYJ99064.1 Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 652.1 bits (1681), Expect = 2.7e-183 Identity = 339/352 (96.31%), Postives = 345/352 (98.01%), Query Frame = 0
BLAST of PI0009721 vs. NCBI nr
Match: XP_004137527.1 (uncharacterized protein LOC101205794 isoform X1 [Cucumis sativus]) HSP 1 Score: 647.5 bits (1669), Expect = 6.6e-182 Identity = 339/352 (96.31%), Postives = 342/352 (97.16%), Query Frame = 0
BLAST of PI0009721 vs. NCBI nr
Match: XP_038894003.1 (uncharacterized protein LOC120082771 isoform X1 [Benincasa hispida]) HSP 1 Score: 610.9 bits (1574), Expect = 6.8e-171 Identity = 316/353 (89.52%), Postives = 338/353 (95.75%), Query Frame = 0
BLAST of PI0009721 vs. NCBI nr
Match: KAG6572989.1 (LysM and putative peptidoglycan-binding domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 559.3 bits (1440), Expect = 2.4e-155 Identity = 297/355 (83.66%), Postives = 323/355 (90.99%), Query Frame = 0
BLAST of PI0009721 vs. NCBI nr
Match: KAG7012173.1 (hypothetical protein SDJN02_24925 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 557.0 bits (1434), Expect = 1.2e-154 Identity = 296/357 (82.91%), Postives = 323/357 (90.48%), Query Frame = 0
BLAST of PI0009721 vs. TAIR 10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 235.3 bits (599), Expect = 7.3e-62 Identity = 164/370 (44.32%), Postives = 216/370 (58.38%), Query Frame = 0
BLAST of PI0009721 vs. TAIR 10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 225.7 bits (574), Expect = 5.8e-59 Identity = 153/354 (43.22%), Postives = 213/354 (60.17%), Query Frame = 0
BLAST of PI0009721 vs. TAIR 10
Match: AT1G55000.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 45.8 bits (107), Expect = 8.2e-05 Identity = 19/47 (40.43%), Postives = 33/47 (70.21%), Query Frame = 0
BLAST of PI0009721 vs. TAIR 10
Match: AT1G55000.2 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 45.8 bits (107), Expect = 8.2e-05 Identity = 19/47 (40.43%), Postives = 33/47 (70.21%), Query Frame = 0
BLAST of PI0009721 vs. TAIR 10
Match: AT1G55000.3 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 45.8 bits (107), Expect = 8.2e-05 Identity = 19/47 (40.43%), Postives = 33/47 (70.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|