PI0005527 (gene) Melon (PI 482460) v1

Overview


Name	PI0005527
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transposase
Location	chr11: 14331266 .. 14331776 (-)
RNA-Seq Expression	PI0005527
Synteny	PI0005527

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATCGAGGTAATTAGTTAAGTTTCGACAAAATTTAATGTATGGGTTTCTATTTGCATTATCATTGTTGGATTTTTTTACTTTCTTAGGTTCGATCCTAATGAAAAAGAAGTTGTTTGTGAGTCAAATATCAACATGCCCCTACCTTTGAAGACAATACTTAGATTTTTTGAAAAGGTAATGGAAAAGAATTCTGGCATTCGTTACCAACTACCAGTTTCGCTGTTTGGTATCGATAGAAAAACTTGTGTTCTGCAAGAAGATATTATTGACTTCTGTAACATGCGAGAAGTCAAGATTTTGACATTGGTGGCAGATATGGCGTAAGTACCAATTCATCTACTCTAGTCTTTCTATGTAAAGTATTCGTTCATTGACTTTTTTTCATCTTTTGTAGGTATTTGCATTCAGAAAATGTTTCAAATTACATCTTTGTTGACCCATCCCTTATATCGATTGGACACAACACCCAGGAAGTTAGAGTTCACAACAAAACCAACTTGTTCTGA

mRNA sequence

ATGCTATCGAGGTTCGATCCTAATGAAAAAGAAGTTGTTTGTGAGTCAAATATCAACATGCCCCTACCTTTGAAGACAATACTTAGATTTTTTGAAAAGGTAATGGAAAAGAATTCTGGCATTCGTTACCAACTACCAGTTTCGCTGTTTGGTATCGATAGAAAAACTTGTGTTCTGCAAGAAGATATTATTGACTTCTGTAACATGCGAGAAGTCAAGATTTTGACATTGGTGGCAGATATGGCGTATTTGCATTCAGAAAATGTTTCAAATTACATCTTTGTTGACCCATCCCTTATATCGATTGGACACAACACCCAGGAAGTTAGAGTTCACAACAAAACCAACTTGTTCTGA

Coding sequence (CDS)

ATGCTATCGAGGTTCGATCCTAATGAAAAAGAAGTTGTTTGTGAGTCAAATATCAACATGCCCCTACCTTTGAAGACAATACTTAGATTTTTTGAAAAGGTAATGGAAAAGAATTCTGGCATTCGTTACCAACTACCAGTTTCGCTGTTTGGTATCGATAGAAAAACTTGTGTTCTGCAAGAAGATATTATTGACTTCTGTAACATGCGAGAAGTCAAGATTTTGACATTGGTGGCAGATATGGCGTATTTGCATTCAGAAAATGTTTCAAATTACATCTTTGTTGACCCATCCCTTATATCGATTGGACACAACACCCAGGAAGTTAGAGTTCACAACAAAACCAACTTGTTCTGA

Protein sequence

MLSRFDPNEKEVVCESNINMPLPLKTILRFFEKVMEKNSGIRYQLPVSLFGIDRKTCVLQEDIIDFCNMREVKILTLVADMAYLHSENVSNYIFVDPSLISIGHNTQEVRVHNKTNLF

Homology

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BLAST of PI0005527 vs. ExPASy TrEMBL
Match: A0A5A7T1I2 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4533G00050 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.7e-40
Identity = 87/107 (81.31%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 8   NEKEVVCESNINMPLPLKTILRFFEKVMEKNSGIRYQLPVSLFGIDRKTCVLQEDIIDFC 67
           NEKEVVCESNI MPLPLKTIL+  +KVM+K SGIRYQLP SLFGI RKTCVLQEDIIDFC
Sbjct: 55  NEKEVVCESNIKMPLPLKTILKIAKKVMDKASGIRYQLPFSLFGIGRKTCVLQEDIIDFC 114

Query: 68  NMREVKILTLVADMAYLHSEN-VSNYIFVDPSLISIGHNTQEVRVHN 114
           NMREVK LTLVA MAY HS++ +SNYIFVDPSLIS+ HNTQEVR  N
Sbjct: 115 NMREVKALTLVAYMAYFHSQDELSNYIFVDPSLISVRHNTQEVRARN 161

[Close]

BLAST of PI0005527 vs. ExPASy TrEMBL
Match: A0A5A7U2V5 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00040 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-39
Identity = 87/107 (81.31%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 8   NEKEVVCESNINMPLPLKTILRFFEKVMEKNSGIRYQLPVSLFGIDRKTCVLQEDIIDFC 67
           NEKEVVCESNI M LPLK ILRF EKV  K+SGIRYQLP SLFGIDRK CVL+EDIIDFC
Sbjct: 312 NEKEVVCESNIKMSLPLKIILRFAEKVTNKDSGIRYQLPFSLFGIDRKMCVLREDIIDFC 371

Query: 68  NMREVKILTLVADMAYLHSEN-VSNYIFVDPSLISIGHNTQEVRVHN 114
           NMREVK LTLVA MAY HS++ +SNYIFVDPSLIS+GHNTQEVR  N
Sbjct: 372 NMREVKTLTLVAYMAYWHSQDELSNYIFVDPSLISVGHNTQEVRARN 418

[Close]

BLAST of PI0005527 vs. ExPASy TrEMBL
Match: A0A5A7TUX7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00410 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37
Identity = 83/107 (77.57%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 8   NEKEVVCESNINMPLPLKTILRFFEKVMEKNSGIRYQLPVSLFGIDRKTCVLQEDIIDFC 67
           NEKEVVCE N+ M LPLKTILRF E VM+K+SGIRYQLP SLFGI RKTCVL+EDIIDFC
Sbjct: 773 NEKEVVCEFNMKMSLPLKTILRFAENVMDKDSGIRYQLPFSLFGIGRKTCVLREDIIDFC 832

Query: 68  NMREVKILTLVADMAYLHSEN-VSNYIFVDPSLISIGHNTQEVRVHN 114
           NMREVK LT VA   YLHS++ +SNYIFV PSLIS+GHNTQEVR  N
Sbjct: 833 NMREVKTLTFVAYTVYLHSQDKLSNYIFVGPSLISVGHNTQEVRARN 879

[Close]

BLAST of PI0005527 vs. ExPASy TrEMBL
Match: A0A5D3BVS7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00870 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37
Identity = 83/107 (77.57%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 8   NEKEVVCESNINMPLPLKTILRFFEKVMEKNSGIRYQLPVSLFGIDRKTCVLQEDIIDFC 67
           NEKEVVCE N+ M LPLKTILRF E VM+K+SGIRYQLP SLFGI RKTCVL+EDIIDFC
Sbjct: 773 NEKEVVCEFNMKMSLPLKTILRFAENVMDKDSGIRYQLPFSLFGIGRKTCVLREDIIDFC 832

Query: 68  NMREVKILTLVADMAYLHSEN-VSNYIFVDPSLISIGHNTQEVRVHN 114
           NMREVK LT VA   YLHS++ +SNYIFV PSLIS+GHNTQEVR  N
Sbjct: 833 NMREVKTLTFVAYTVYLHSQDKLSNYIFVGPSLISVGHNTQEVRARN 879

[Close]

BLAST of PI0005527 vs. ExPASy TrEMBL
Match: A0A5A7U6T9 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3445G00180 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.7e-37
Identity = 81/107 (75.70%), Postives = 92/107 (85.98%), Query Frame = 0


Query: 8   NEKEVVCESNINMPLPLKTILRFFEKVMEKNSGIRYQLPVSLFGIDRKTCVLQEDIIDFC 67
           NEKE+VC+SNI MPLPLKTILRF EKVM+K+SGIRYQLP SLFGI RKTCVL+EDIID C
Sbjct: 31  NEKEIVCDSNIKMPLPLKTILRFAEKVMDKDSGIRYQLPFSLFGIGRKTCVLREDIIDIC 90

Query: 68  NMREVKILTLVADMAYLHSEN-VSNYIFVDPSLISIGHNTQEVRVHN 114
           N+ E K LTLVA M YLHS++ +SNYIFVDP LI++ HNTQEVR  N
Sbjct: 91  NIGEAKTLTLVAYMVYLHSQDELSNYIFVDPFLINVEHNTQEVRARN 137

[Close]

BLAST of PI0005527 vs. NCBI nr
Match: KAA0036658.1 (uncharacterized protein E6C27_scaffold4533G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 172.9 bits (437), Expect = 1.6e-39
Identity = 87/107 (81.31%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 8   NEKEVVCESNINMPLPLKTILRFFEKVMEKNSGIRYQLPVSLFGIDRKTCVLQEDIIDFC 67
           NEKEVVCESNI MPLPLKTIL+  +KVM+K SGIRYQLP SLFGI RKTCVLQEDIIDFC
Sbjct: 55  NEKEVVCESNIKMPLPLKTILKIAKKVMDKASGIRYQLPFSLFGIGRKTCVLQEDIIDFC 114

Query: 68  NMREVKILTLVADMAYLHSEN-VSNYIFVDPSLISIGHNTQEVRVHN 114
           NMREVK LTLVA MAY HS++ +SNYIFVDPSLIS+ HNTQEVR  N
Sbjct: 115 NMREVKALTLVAYMAYFHSQDELSNYIFVDPSLISVRHNTQEVRARN 161

[Close]

BLAST of PI0005527 vs. NCBI nr
Match: KAA0049568.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 171.8 bits (434), Expect = 3.6e-39
Identity = 87/107 (81.31%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 8   NEKEVVCESNINMPLPLKTILRFFEKVMEKNSGIRYQLPVSLFGIDRKTCVLQEDIIDFC 67
           NEKEVVCESNI M LPLK ILRF EKV  K+SGIRYQLP SLFGIDRK CVL+EDIIDFC
Sbjct: 312 NEKEVVCESNIKMSLPLKIILRFAEKVTNKDSGIRYQLPFSLFGIDRKMCVLREDIIDFC 371

Query: 68  NMREVKILTLVADMAYLHSEN-VSNYIFVDPSLISIGHNTQEVRVHN 114
           NMREVK LTLVA MAY HS++ +SNYIFVDPSLIS+GHNTQEVR  N
Sbjct: 372 NMREVKTLTLVAYMAYWHSQDELSNYIFVDPSLISVGHNTQEVRARN 418

[Close]

BLAST of PI0005527 vs. NCBI nr
Match: TYK03264.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 2.5e-37
Identity = 83/107 (77.57%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 8   NEKEVVCESNINMPLPLKTILRFFEKVMEKNSGIRYQLPVSLFGIDRKTCVLQEDIIDFC 67
           NEKEVVCE N+ M LPLKTILRF E VM+K+SGIRYQLP SLFGI RKTCVL+EDIIDFC
Sbjct: 773 NEKEVVCEFNMKMSLPLKTILRFAENVMDKDSGIRYQLPFSLFGIGRKTCVLREDIIDFC 832

Query: 68  NMREVKILTLVADMAYLHSEN-VSNYIFVDPSLISIGHNTQEVRVHN 114
           NMREVK LT VA   YLHS++ +SNYIFV PSLIS+GHNTQEVR  N
Sbjct: 833 NMREVKTLTFVAYTVYLHSQDKLSNYIFVGPSLISVGHNTQEVRARN 879

[Close]

BLAST of PI0005527 vs. NCBI nr
Match: KAA0046884.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 165.6 bits (418), Expect = 2.5e-37
Identity = 83/107 (77.57%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 8   NEKEVVCESNINMPLPLKTILRFFEKVMEKNSGIRYQLPVSLFGIDRKTCVLQEDIIDFC 67
           NEKEVVCE N+ M LPLKTILRF E VM+K+SGIRYQLP SLFGI RKTCVL+EDIIDFC
Sbjct: 773 NEKEVVCEFNMKMSLPLKTILRFAENVMDKDSGIRYQLPFSLFGIGRKTCVLREDIIDFC 832

Query: 68  NMREVKILTLVADMAYLHSEN-VSNYIFVDPSLISIGHNTQEVRVHN 114
           NMREVK LT VA   YLHS++ +SNYIFV PSLIS+GHNTQEVR  N
Sbjct: 833 NMREVKTLTFVAYTVYLHSQDKLSNYIFVGPSLISVGHNTQEVRARN 879

[Close]

BLAST of PI0005527 vs. NCBI nr
Match: KAA0051623.1 (uncharacterized protein E6C27_scaffold4784G00030 [Cucumis melo var. makuwa] >TYK27633.1 uncharacterized protein E5676_scaffold3445G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 164.5 bits (415), Expect = 5.7e-37
Identity = 81/107 (75.70%), Postives = 92/107 (85.98%), Query Frame = 0


Query: 8   NEKEVVCESNINMPLPLKTILRFFEKVMEKNSGIRYQLPVSLFGIDRKTCVLQEDIIDFC 67
           NEKE+VC+SNI MPLPLKTILRF EKVM+K+SGIRYQLP SLFGI RKTCVL+EDIID C
Sbjct: 31  NEKEIVCDSNIKMPLPLKTILRFAEKVMDKDSGIRYQLPFSLFGIGRKTCVLREDIIDIC 90

Query: 68  NMREVKILTLVADMAYLHSEN-VSNYIFVDPSLISIGHNTQEVRVHN 114
           N+ E K LTLVA M YLHS++ +SNYIFVDP LI++ HNTQEVR  N
Sbjct: 91  NIGEAKTLTLVAYMVYLHSQDELSNYIFVDPFLINVEHNTQEVRARN 137

The following BLAST results are available for this feature:

BLAST of PI0005527 vs.


Match Name	E-value	Identity	Description

BLAST of PI0005527 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T1I2	7.7e-40	81.31	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7U2V5	1.7e-39	81.31	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TUX7	1.2e-37	77.57	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00410 PE...	[more]
A0A5D3BVS7	1.2e-37	77.57	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00870 PE...	[more]
A0A5A7U6T9	2.7e-37	75.70	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of PI0005527 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036658.1	1.6e-39	81.31	uncharacterized protein E6C27_scaffold4533G00050 [Cucumis melo var. makuwa]	[more]
KAA0049568.1	3.6e-39	81.31	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
TYK03264.1	2.5e-37	77.57	transposase [Cucumis melo var. makuwa]	[more]
KAA0046884.1	2.5e-37	77.57	transposase [Cucumis melo var. makuwa]	[more]
KAA0051623.1	5.7e-37	75.70	uncharacterized protein E6C27_scaffold4784G00030 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of PI0005527 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0005527.1	PI0005527.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0016301	kinase activity