PI0005377 (gene) Melon (PI 482460) v1

Overview


Name	PI0005377
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Location	chr04: 10286335 .. 10291329 (+)
RNA-Seq Expression	PI0005377
Synteny	PI0005377

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTACAAATAAGTAGACAAAATTCCCTAGGTTGTTTAACTTAGCATTGGCGAAAAGCCGATTGGCATTTGGGAAGGTCCGGGTTCGTTCATCAGAAGAAGTTCAGTGACGAAAAACAGCGAGAGAGGTTGGAAATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTACTCTGCCAATCATCTCCTTCAAGCGCCCCTGCTAGGTATTCCGTTTCTAATCTCTCTTTTAGCCTTTATGATCCCTTCTAAATCTACAAATCCTGCTCCTTCCAGAGCTTATTTTCAGATATCGTTTGATTAAAATGAGCTTTGGCTCTGACAGGGCATTTGTTGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCAATATTAATCCGCGAATGCAGTGGAATCGAGCCCCAATTATGGGCTAGATATGGTACTTCATTGCCCTCTACTCCTCAAATGATTTCATTTCTAGCTTTGGAGATTTGATGCTTTCTTTGTTGCTATACTTGAATTGATTATTGATAAGCGTAATTGGTGATGTTATATAATCTGCTGGGTGGTCTTTCTTTGAAATTGATTATTACTTTCTTCATCTTCTTAGTGATGGAAAATACTCTTTCCATGGTAGATAGTCAGGTCATAGTATTTTGAAGACTCCATTTCCAGGGATGTTGTAGATGCCCATCTAATCGAATTCTCGTTCTAGGTTTATTTTGTTAAGCTTTGCAGTTTTCTTTTATTTTCTTCTGAGAACTGTGAAATTTGACTGGTCCTGTAGTTTCTCGAGTAAAATAAAAATCAACTGGTTCTATTCCCACGCCGACATCTTCGTTGTACATTATAAATGATGGATAAATTAGTAGCACGGGAGTTTCACTGTGTCCCATTTTCCCTTCACTGTCATCGAAAGAAAACATATTGTTAAGACGAGCTGTTCTTACTTTTGGTTATATCGGTGGCTGATCTTTCAAGAGAGACACTCATGAGCCATGAATACTAGTGTTATAAACTTCTAACCTCTTACAAATGCAAGGATGGGGTTTATTTGTTGATTTATTTTTTCTGTTTAACCTTTTGTCTAAAAGATAGTACATGTGAGGAAACACAGAACAAAAGAGGTTTACCACCTACCAACCAATTTTCTGAAAAATGGATCTTAATACGTATTCTCAATGGACGTAGAGAATTTAATGAAGTGTACAGAAAATGTAAAACTGTAATTCCTGGACATTTAGAGGAGCCTCTAATCTCATAGGCTGAAACCTAGCAAAAAGGGTGTGGACCATAATCGTTCTTAATAACGTTGTGCCTTATTATTATTTTTTTAAATGGAAACGAGCCTCTTCGTTAATATAATGAAATGAGACTAATGCTCAAAGTACAAGAGAATTATACAAAGCGCTGGAATCTTCTAAGGGACAAGGAATCCGGAATCCAAAAATACGGACAAACAAAACAACGCCCAAGAGCTTAACAAACTCCAAACAAGGCAGAAAAACAATAAAAAACAGCAACTGAAAAAATTCAATACAAATGAAATGCTGGGAAAGGAAAACAAAAGTGCACCAAAAAACCATAACCATGAAAGAAGTAATCTTTAAAAAGCTTAAAGAAGATGCATCTCAAGAGGACGAAATGAAAGAGCTGAGCTATCTCAAAAACAACCAAAGAACATTTGATTAAAAAAATTCATGAACTACACAAGCTGACAAACTGCTACCATGACTTCTGCTGCACGTCTGAGATACCAATCTTGAGGAGAATACTCCTTGTGTCGTAAAGCATCGGTTCCCAAAAAGAAAAAAAACATAGAACAGAGGGGTCTATCCCTCACACACTGATCTTCCAAAAAATATTTTTCCTTTCCCTCCCCACCACACAATGAACCAAGTGAGATAAGGAAGAGAGCTTATAAGAAATATCCTTCCACATGTTTCGGTAACTGCCTTAACCCTACCTGACGACAAGGATGAGAAGAGGATCATACTTGCTCACAATAATTCTTTGCCAAAGAGTTCAAGGCTCAAAGGGTGGAAATGCGAAAGCCATTTAGCCAAGAGGGCTTTGTTGCAAGTCCTTAAGTTCCCAATTTCTGCCTCCCCTCACAGGCCTCTCAATGATCTTCCGTCAAACAAAATGCATATGTTTTTTCTTCTTCCACCCCTTTCGAAAGGAAATTGTGCATAATCTTCTCTGTGCTTATACAAACCAAGCAAGAAGCGCTAAATAGAGAGAAATAATAAATGGAAGTACCACTTAGAACCAAAGGGATTATAAGTTAGTCTACAAGCATTAGAGAAAAGGCATTTCTTCTGAGAGGCCAGTCTCTTCCTAACCTTAACCACAACAGTGTTCCAAAAAGAAACAAATTTAGGATTACCTCTAAGAGGGAGAACTAGGTAGGAGGAAGGGAGAGAACCAAGATCACAGCCAAAAAAATCCACCCAACCACTAAGCTTCTCCTCGTTGCAATTTAGCCCCAAATTTGACTCTTCCTCCCGTTGATCTTAAGCCTAGATATAGCTTTAAAGAAAGCATGCATTAAAATTAAGAATGAATCCTCCTTACTAGAACAAAAAAGAATTGTGTTGTTGGCAAATTGAAGGTGAGATGACGACACTTTCTCTAAACGACTCAATAATTTAATCTTCAACAATCGGAAAAAAAGACCTTATTCAGCACATCCACCACAAGCAAGAAGAGAAAAGGTGATGAAGAATCACTTCATCTTAGGGCCCTAAAAGCCCTTATCTTGCCTTTCAGACTCTCGTTAATGAGAATAGAGTGACTCACATTTCTAGTTGGCTTGTCCAAAATTTCCAACGAACAGCTTTAGGAAGGGCTGTTGTTTGACTTATTTGGATTGAGAGGAATAACAAAATTTTTAGGGAAATGGAGAGATCAAGTGAGGAAGTATTATTCTTGTTAATAGACTCTTCTCTAATTATGATCTTGCTTTGATTTTGTTAGGTTGAAGCCCTTTTTGTAGCTCTTGTGGTTTCCTCTTGCTTCTTGCTCCTTGTTTTTTTGTCGAGCTCTTGTGCTCTTTTTGTGTGCCATGTATTCCTTTCATTCTTTTTCGAGAAAAGTTCAGTTTTAGGGAAGGTATTTTTTTCCCTTCTTTGATAATTTACTTGGTAGCAAATTGTACACTCGATGTCAGGAGGCCTACTCGAAAGGTTAACTGTTGACTGTTGTGCAAAAAGAGATTGAAACATTCATCAAGTGAGGAAGCATGTGAACTTGGGGGAAATGTAGATGTTGGGATTTTACCTTCAATTTGTATACGGACTGTTAGCAATACCTATGAGTGGCTCCGAAATAAAAGGTCTGCACTTCTTCTGATAACTATTTTCATCCTTCATTGCGCATTTGCCCAAGTTTGGGTCAAGGATTCCAGAATCTATTGTGATGACATTCAAAAGAGACTTGCAGACTTGCAGCCAAACAAGCAGAGTCATAAAGCTACAAAAGGATGAAATTATCCGTTGATATGTCCATATAACCGTAAATTGAAGGGTTTGATATTGATATTAAATATCCATGGATATCTTCAACATCTTTTATAAATCATTTTCTTAGTCCAAATATGAATAGGAATTCTATTAACATTATCGATAACTTAATTTGGGAGGAAAACAACTTAATTATTAATATAGATAAATTTTGTGAGTTACATAAATACTCATCGATGTTGATATTTTATTGATATATCCGTAGAATTAAAATCTCATTATCGATATTGACATCGATATTTTAATCATTGGCTACAACCACTTGTCTTGCACAACCCTAAACATGTATTTGACAAGGGTATCTGTGAGAGAGAAAGATGCCTTTGTTATTTTAGTATCCCTTTGAGGGTTTTCTCAGGATCAGGTGTTTGTTCAATACCTTCGAAGTTAGTCTCCTGAAGTCAATACCTCTTTCAGGTCGAAAGTGGCTTTCTAAGGGGCTTTAGTGGTTTTGATGGTTGGTAGAATCGATCATCAGCCACCTTTAGAAACTCCCTATTGTTTTAGCTAATTATCATAGAAGAATGTAGTAGAGGTGAAAAAGAAAAAAGAGGAGGGGCTTCTTATGCAAATCAACAAATAGAGCTTGTGATTATGGGAATTGGAATTACCTTGATGGTATTATGAGAATGGAAGATTTTGGATCAAGATGGAGGCCAAAGTGACACTTCCACAAACAATTGGGGAGATTGTCACCTGGAAATTGGAAGTAGTGGACATGCTTTCTTTGCCTTTTTAACCATCTGGTTTGGCCCACGATCATAAGGAAGAATTGGTGAATGATAATAGATGTTTCTTATGAATGCTAATATCTCGCGAGTTTTGACTTTAAATTTCTTAAGATTAGATATATTTCTTTTTCTGAAAGAGTTATCATGTGCTGAATTTTAAAGGATCTGTGACTGCAATATGCACTTTTTATGTTCGTTTTGTTTACTGCAACCAATTATTTTTCCTTCTGATTTTTGGCAGACATGGGCATTGAGAGGGTTGCTCGTCTGGAGGGGTTGAGTGAGGCACAGATCTCAAAGGCACTCGAAGACCTAGTTAAAGTTGGGGCATCATGAAGGAATAATCTGCTGTGCTATTGTTACTCGCAACTGACGTTAATAAATGCACGAGTGGAACTTTTGCTGAGATGCTTTTCTGTTTACATTCTTTTCGCTCTGCTTTTATGAGATTATTGCTCAAATATTGATCTTGAGTAATCGAGTTTCTGGTACGTAACCTTATTTGTTTACATGAATAGTTTCTCCGGGAGTGTTATCATAATGGATACTCTTTGCAATGAGAGATTAGATTGAAAAGTATTAGAATATGAGAGAATAAATGGACACTTTTTAAACCATGAGGATAAATTGAAAAATACTAGAACGTTAAGTACTAAAATATGATGTATTTAGCCTTTGAATGCACACAAGAAGTTGGTAAGTTTAGCAAACTTTCAAAGTTGATGAGTTTTGGG

mRNA sequence

ATTACAAATAAGTAGACAAAATTCCCTAGGTTGTTTAACTTAGCATTGGCGAAAAGCCGATTGGCATTTGGGAAGGTCCGGGTTCGTTCATCAGAAGAAGTTCAGTGACGAAAAACAGCGAGAGAGGTTGGAAATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTACTCTGCCAATCATCTCCTTCAAGCGCCCCTGCTAGGGCATTTGTTGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCAATATTAATCCGCGAATGCAGTGGAATCGAGCCCCAATTATGGGCTAGATATGACATGGGCATTGAGAGGGTTGCTCGTCTGGAGGGGTTGAGTGAGGCACAGATCTCAAAGGCACTCGAAGACCTAGTTAAAGTTGGGGCATCATGAAGGAATAATCTGCTGTGCTATTGTTACTCGCAACTGACGTTAATAAATGCACGAGTGGAACTTTTGCTGAGATGCTTTTCTGTTTACATTCTTTTCGCTCTGCTTTTATGAGATTATTGCTCAAATATTGATCTTGAGTAATCGAGTTTCTGGTACGTAACCTTATTTGTTTACATGAATAGTTTCTCCGGGAGTGTTATCATAATGGATACTCTTTGCAATGAGAGATTAGATTGAAAAGTATTAGAATATGAGAGAATAAATGGACACTTTTTAAACCATGAGGATAAATTGAAAAATACTAGAACGTTAAGTACTAAAATATGATGTATTTAGCCTTTGAATGCACACAAGAAGTTGGTAAGTTTAGCAAACTTTCAAAGTTGATGAGTTTTGGG

Coding sequence (CDS)

ATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTACTCTGCCAATCATCTCCTTCAAGCGCCCCTGCTAGGGCATTTGTTGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCAATATTAATCCGCGAATGCAGTGGAATCGAGCCCCAATTATGGGCTAGATATGACATGGGCATTGAGAGGGTTGCTCGTCTGGAGGGGTTGAGTGAGGCACAGATCTCAAAGGCACTCGAAGACCTAGTTAAAGTTGGGGCATCATGA

Protein sequence

MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

Homology

[Close]

BLAST of PI0005377 vs. ExPASy Swiss-Prot
Match: Q9FIJ2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At5g47890 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 5.6e-38
Identity = 72/95 (75.79%), Postives = 85/95 (89.47%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSG++PQ+
Sbjct: 1  MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Sbjct: 61 WARYDMGVERCVNLDGLTEPQILKALENLVKSGAT 95

[Close]

BLAST of PI0005377 vs. ExPASy Swiss-Prot
Match: P0CB79 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=9601 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-18
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 0


Query: 11  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIER 70
           L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+
Sbjct: 16  LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71  VARLEGLSEAQISKALEDLVKVGAS 96
              L   S  Q+++ALE+++K  AS
Sbjct: 76  NVPLNNFSADQVTRALENVLKPEAS 100

[Close]

BLAST of PI0005377 vs. ExPASy Swiss-Prot
Match: P0CB80 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus OX=9600 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-18
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 0


Query: 11  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIER 70
           L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+
Sbjct: 16  LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71  VARLEGLSEAQISKALEDLVKVGAS 96
              L   S  Q+++ALE+++K  AS
Sbjct: 76  NVPLNNFSADQVTRALENVLKPEAS 100

[Close]

BLAST of PI0005377 vs. ExPASy Swiss-Prot
Match: Q02370 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=9913 GN=NDUFA2 PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 6.5e-18
Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 4  RGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWAR 63
          RG+L   L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWAR
Sbjct: 11 RGKL--GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWAR 70

Query: 64 YDMGIERVARLEGLSEAQISKALEDLV 91
          Y  G E+   L   S  Q+++ALE+++
Sbjct: 71 YAFGQEKNVSLNNFSADQVTRALENVL 95

[Close]

BLAST of PI0005377 vs. ExPASy Swiss-Prot
Match: Q4R5E2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicularis OX=9541 GN=NDUFA2 PE=3 SV=3)

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-17
Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 11 LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIER 70
          L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS ++P+LWARY  G E+
Sbjct: 16 LREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQEK 75

Query: 71 VARLEGLSEAQISKALEDLV 91
             L   S  Q+++ALE+++
Sbjct: 76 NVPLNNFSADQVTRALENVL 95

[Close]

BLAST of PI0005377 vs. ExPASy TrEMBL
Match: A0A5A7T2I6 (NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00030 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of PI0005377 vs. ExPASy TrEMBL
Match: A0A1S3CN67 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103502835 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of PI0005377 vs. ExPASy TrEMBL
Match: A0A0A0LDA2 (L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G845450 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.9e-45
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL
Sbjct: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of PI0005377 vs. ExPASy TrEMBL
Match: A0A6J1F628 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442457 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of PI0005377 vs. ExPASy TrEMBL
Match: A0A6J1J6D3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482169 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.1e-44
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQI KALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQILKALEDLVKVGAS 95

[Close]

BLAST of PI0005377 vs. NCBI nr
Match: XP_008465169.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo] >KAA0037682.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 191.4 bits (485), Expect = 3.5e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of PI0005377 vs. NCBI nr
Match: XP_004141152.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 1.0e-44
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL
Sbjct: 1  MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of PI0005377 vs. NCBI nr
Match: XP_038906356.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 1.7e-44
Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQSSPSSAPAR FVEKNYKDLKTLNPKFPILIRECSG+EPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARGFVEKNYKDLKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of PI0005377 vs. NCBI nr
Match: XP_022935669.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata] >KAG6581644.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018138.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188.3 bits (477), Expect = 3.0e-44
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSG+EPQL
Sbjct: 1  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKELKTLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of PI0005377 vs. NCBI nr
Match: XP_022152373.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charantia])

HSP 1 Score: 186.0 bits (471), Expect = 1.5e-43
Identity = 90/95 (94.74%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSG+EPQL
Sbjct: 1  MAWRGHLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKSLNPKFPILIRECSGVEPQL 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61 WARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of PI0005377 vs. TAIR 10
Match: AT5G47890.1 (NADH-ubiquinone oxidoreductase B8 subunit, putative )

HSP 1 Score: 157.9 bits (398), Expect = 4.0e-39
Identity = 72/95 (75.79%), Postives = 85/95 (89.47%), Query Frame = 0


Query: 1  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQL 60
          MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSG++PQ+
Sbjct: 1  MAWRGSISKSMKELRILLCQSSPASAPTRTFVEKNYKDLKSLNPKLPILIRECSGVQPQM 60

Query: 61 WARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 96
          WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Sbjct: 61 WARYDMGVERCVNLDGLTEPQILKALENLVKSGAT 95

The following BLAST results are available for this feature:

BLAST of PI0005377 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIJ2	5.6e-38	75.79	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thal...	[more]
P0CB79	2.2e-18	51.76	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=...	[more]
P0CB80	2.2e-18	51.76	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus O...	[more]
Q02370	6.5e-18	50.57	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=99...	[more]
Q4R5E2	1.9e-17	51.25	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicula...	[more]

BLAST of PI0005377 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T2I6	1.7e-45	100.00	NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var...	[more]
A0A1S3CN67	1.7e-45	100.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=...	[more]
A0A0A0LDA2	4.9e-45	98.95	L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G8454...	[more]
A0A6J1F628	1.4e-44	96.84	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m...	[more]
A0A6J1J6D3	7.1e-44	95.79	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m...	[more]

BLAST of PI0005377 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465169.1	3.5e-45	100.00	PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis...	[more]
XP_004141152.1	1.0e-44	98.95	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus]	[more]
XP_038906356.1	1.7e-44	96.84	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida]	[more]
XP_022935669.1	3.0e-44	96.84	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita mos...	[more]
XP_022152373.1	1.5e-43	94.74	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charanti...	[more]

BLAST of PI0005377 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47890.1	4.0e-39	75.79	NADH-ubiquinone oxidoreductase B8 subunit, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007741	Ribosomal protein/NADH dehydrogenase domain	SMART	SM00916	L51_S25_CI_B8_2	coord: 20..93 e-value: 6.9E-24 score: 95.4
IPR007741	Ribosomal protein/NADH dehydrogenase domain	PFAM	PF05047	L51_S25_CI-B8	coord: 28..78 e-value: 1.9E-13 score: 50.1
IPR016464	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2	PIRSF	PIRSF005822	NDUA2	coord: 1..95 e-value: 3.6E-39 score: 131.3
IPR016464	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2	PANTHER	PTHR12878	NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT	coord: 1..94
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 2..93 e-value: 1.6E-30 score: 107.3
None	No IPR available	PIRSR	PIRSR005822-1	PIRSR005822-1	coord: 1..91 e-value: 3.0E-37 score: 125.0
None	No IPR available	PANTHER	PTHR12878:SF5	BNAANNG07980D PROTEIN	coord: 1..94
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 10..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0005377.1	PI0005377.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I