PI0005217 (gene) Melon (PI 482460) v1

Overview
NamePI0005217
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Locationchr09: 10679056 .. 10679415 (-)
RNA-Seq ExpressionPI0005217
SyntenyPI0005217
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTACTTCACCGAATGCTTCTTATCTGAAAATAGGCACCTTACAATCCTTACTGATAAGAATCAACCAAGAGAAAATGGTCTCAGTCTCCTTGTAGAGAAGTCGTTGACGGGTCATTTTGCAGATTTTTGGCCAAACCTAGACAACAGCTCGATTCTTCCCAAATTATCTGTGGAGATACCTTTGTCTCAGGGAAAAAACGCATGGGTCCTGCAATCTTCTATCCATGATGAGGCTCCTAATGCCAATCGAGTCCTCACTCTCGGACATCGCATAATTGAAGGTCAAACCCGTTGGGGTGCCGTGACTAAAGTCCCAGGAAAATTCTGCTTTACTGACTGTTATTGGAGTGGCTAG

mRNA sequence

ATGGTTTACTTCACCGAATGCTTCTTATCTGAAAATAGGCACCTTACAATCCTTACTGATAAGAATCAACCAAGAGAAAATGGTCTCAGTCTCCTTGTAGAGAAGTCGTTGACGGGTCATTTTGCAGATTTTTGGCCAAACCTAGACAACAGCTCGATTCTTCCCAAATTATCTGTGGAGATACCTTTGTCTCAGGGAAAAAACGCATGGGTCCTGCAATCTTCTATCCATGATGAGGCTCCTAATGCCAATCGAGTCCTCACTCTCGGACATCGCATAATTGAAGGTCAAACCCGTTGGGGTGCCGTGACTAAAGTCCCAGGAAAATTCTGCTTTACTGACTGTTATTGGAGTGGCTAG

Coding sequence (CDS)

ATGGTTTACTTCACCGAATGCTTCTTATCTGAAAATAGGCACCTTACAATCCTTACTGATAAGAATCAACCAAGAGAAAATGGTCTCAGTCTCCTTGTAGAGAAGTCGTTGACGGGTCATTTTGCAGATTTTTGGCCAAACCTAGACAACAGCTCGATTCTTCCCAAATTATCTGTGGAGATACCTTTGTCTCAGGGAAAAAACGCATGGGTCCTGCAATCTTCTATCCATGATGAGGCTCCTAATGCCAATCGAGTCCTCACTCTCGGACATCGCATAATTGAAGGTCAAACCCGTTGGGGTGCCGTGACTAAAGTCCCAGGAAAATTCTGCTTTACTGACTGTTATTGGAGTGGCTAG

Protein sequence

MVYFTECFLSENRHLTILTDKNQPRENGLSLLVEKSLTGHFADFWPNLDNSSILPKLSVEIPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRWGAVTKVPGKFCFTDCYWSG
Homology
[Close]
BLAST of PI0005217 vs. ExPASy TrEMBL
Match: A0A5A7TZN9 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G001160 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.0e-48
Identity = 90/117 (76.92%), Postives = 105/117 (89.74%), Query Frame = 0 

Query: 1   MVYFTECFLSENRHLTILTDKNQPRENGLSLLVEKSLTGHFADFWPNLDNSSILPKLSVE 60
           MVYFTE FLS  RHL IL+D+NQPRE+GLSL+VEKS  G FAD WP+LDN+S+LP+LSVE
Sbjct: 17  MVYFTERFLSGVRHLIILSDRNQPREDGLSLIVEKSWAGAFADHWPHLDNNSVLPRLSVE 76

Query: 61  IPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRWGAVTKVPGKFCFTDCYW 118
           IPLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTRWG +TKVPG+FCFTDCYW
Sbjct: 77  IPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTDCYW 133

[Close]
BLAST of PI0005217 vs. ExPASy TrEMBL
Match: A0A5D3C267 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001330 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.0e-48
Identity = 90/117 (76.92%), Postives = 105/117 (89.74%), Query Frame = 0 

Query: 1   MVYFTECFLSENRHLTILTDKNQPRENGLSLLVEKSLTGHFADFWPNLDNSSILPKLSVE 60
           MVYFTE FLS  RHL IL+D+NQPRE+GLSL+VEKS  G FAD WP+LDN+S+LP+LSVE
Sbjct: 17  MVYFTERFLSGVRHLIILSDRNQPREDGLSLIVEKSWAGAFADHWPHLDNNSVLPRLSVE 76

Query: 61  IPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRWGAVTKVPGKFCFTDCYW 118
           IPLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTRWG +TKVPG+FCFTDCYW
Sbjct: 77  IPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTDCYW 133

[Close]
BLAST of PI0005217 vs. ExPASy TrEMBL
Match: A0A5A7TZ08 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00990 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.7e-48
Identity = 90/117 (76.92%), Postives = 103/117 (88.03%), Query Frame = 0 

Query: 1   MVYFTECFLSENRHLTILTDKNQPRENGLSLLVEKSLTGHFADFWPNLDNSSILPKLSVE 60
           MVYFTE FLSE RHL IL+D+NQPRE+GLSL+VE    G FAD WP LDN+S+LP+LSVE
Sbjct: 60  MVYFTERFLSEVRHLVILSDRNQPREDGLSLIVETPWAGAFADHWPRLDNNSVLPRLSVE 119

Query: 61  IPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRWGAVTKVPGKFCFTDCYW 118
           IPLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTRWG VTKVPG+FCFTDCYW
Sbjct: 120 IPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYW 176

[Close]
BLAST of PI0005217 vs. ExPASy TrEMBL
Match: A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.6e-48
Identity = 89/117 (76.07%), Postives = 103/117 (88.03%), Query Frame = 0 

Query: 1   MVYFTECFLSENRHLTILTDKNQPRENGLSLLVEKSLTGHFADFWPNLDNSSILPKLSVE 60
           MVYFTE FLS  RHL IL+D+NQPRE+GLSL+VEK   G FAD WP LDN+S+LP+LSVE
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 61  IPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRWGAVTKVPGKFCFTDCYW 118
           +PLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTRWG VTKVPG+FCFTDCYW
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYW 117

[Close]
BLAST of PI0005217 vs. ExPASy TrEMBL
Match: A0A5A7UET3 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001110 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.6e-48
Identity = 89/117 (76.07%), Postives = 103/117 (88.03%), Query Frame = 0 

Query: 1   MVYFTECFLSENRHLTILTDKNQPRENGLSLLVEKSLTGHFADFWPNLDNSSILPKLSVE 60
           MVYFTE FLS  RHL IL+D+NQPRE+GLSL+VEK   G FAD WP LDN+S+LP+LSVE
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 61  IPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRWGAVTKVPGKFCFTDCYW 118
           IPLS+GK+AW+LQSSIH+EAPN+ R LTLG R+IEGQTRWG VTKVPG+FCFTDCYW
Sbjct: 61  IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYW 117

[Close]
BLAST of PI0005217 vs. NCBI nr
Match: TYK04516.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 201.4 bits (511), Expect = 4.2e-48
Identity = 90/117 (76.92%), Postives = 105/117 (89.74%), Query Frame = 0 

Query: 1   MVYFTECFLSENRHLTILTDKNQPRENGLSLLVEKSLTGHFADFWPNLDNSSILPKLSVE 60
           MVYFTE FLS  RHL IL+D+NQPRE+GLSL+VEKS  G FAD WP+LDN+S+LP+LSVE
Sbjct: 17  MVYFTERFLSGVRHLIILSDRNQPREDGLSLIVEKSWAGAFADHWPHLDNNSVLPRLSVE 76

Query: 61  IPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRWGAVTKVPGKFCFTDCYW 118
           IPLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTRWG +TKVPG+FCFTDCYW
Sbjct: 77  IPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTDCYW 133

[Close]
BLAST of PI0005217 vs. NCBI nr
Match: KAA0046821.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 201.4 bits (511), Expect = 4.2e-48
Identity = 90/117 (76.92%), Postives = 105/117 (89.74%), Query Frame = 0 

Query: 1   MVYFTECFLSENRHLTILTDKNQPRENGLSLLVEKSLTGHFADFWPNLDNSSILPKLSVE 60
           MVYFTE FLS  RHL IL+D+NQPRE+GLSL+VEKS  G FAD WP+LDN+S+LP+LSVE
Sbjct: 17  MVYFTERFLSGVRHLIILSDRNQPREDGLSLIVEKSWAGAFADHWPHLDNNSVLPRLSVE 76

Query: 61  IPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRWGAVTKVPGKFCFTDCYW 118
           IPLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTRWG +TKVPG+FCFTDCYW
Sbjct: 77  IPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTDCYW 133

[Close]
BLAST of PI0005217 vs. NCBI nr
Match: KAA0048380.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 201.1 bits (510), Expect = 5.5e-48
Identity = 90/117 (76.92%), Postives = 103/117 (88.03%), Query Frame = 0 

Query: 1   MVYFTECFLSENRHLTILTDKNQPRENGLSLLVEKSLTGHFADFWPNLDNSSILPKLSVE 60
           MVYFTE FLSE RHL IL+D+NQPRE+GLSL+VE    G FAD WP LDN+S+LP+LSVE
Sbjct: 60  MVYFTERFLSEVRHLVILSDRNQPREDGLSLIVETPWAGAFADHWPRLDNNSVLPRLSVE 119

Query: 61  IPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRWGAVTKVPGKFCFTDCYW 118
           IPLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTRWG VTKVPG+FCFTDCYW
Sbjct: 120 IPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYW 176

[Close]
BLAST of PI0005217 vs. NCBI nr
Match: KAA0047478.1 (hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 9.4e-48
Identity = 89/117 (76.07%), Postives = 103/117 (88.03%), Query Frame = 0 

Query: 1   MVYFTECFLSENRHLTILTDKNQPRENGLSLLVEKSLTGHFADFWPNLDNSSILPKLSVE 60
           MVYFTE FLS  RHL IL+D+NQPRE+GLSL+VEK   G FAD WP LDN+S+LP+LSVE
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 61  IPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRWGAVTKVPGKFCFTDCYW 118
           +PLS+GK+AWVLQSSIH+EAPN+ R LTLG R+IEGQTRWG VTKVPG+FCFTDCYW
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYW 117

[Close]
BLAST of PI0005217 vs. NCBI nr
Match: KAA0053734.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 9.4e-48
Identity = 89/117 (76.07%), Postives = 103/117 (88.03%), Query Frame = 0 

Query: 1   MVYFTECFLSENRHLTILTDKNQPRENGLSLLVEKSLTGHFADFWPNLDNSSILPKLSVE 60
           MVYFTE FLS  RHL IL+D+NQPRE+GLSL+VEK   G FAD WP LDN+S+LP+LSVE
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 61  IPLSQGKNAWVLQSSIHDEAPNANRVLTLGHRIIEGQTRWGAVTKVPGKFCFTDCYW 118
           IPLS+GK+AW+LQSSIH+EAPN+ R LTLG R+IEGQTRWG VTKVPG+FCFTDCYW
Sbjct: 61  IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYW 117

The following BLAST results are available for this feature:
BLAST of PI0005217 vs.
Match NameE-valueIdentityDescription
BLAST of PI0005217 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TZN92.0e-4876.92Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5D3C2672.0e-4876.92Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5A7TZ082.7e-4876.92Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5A7TX424.6e-4876.07Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UET34.6e-4876.07Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
BLAST of PI0005217 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK04516.14.2e-4876.92putative mitochondrial protein [Cucumis melo var. makuwa][more]
KAA0046821.14.2e-4876.92putative mitochondrial protein [Cucumis melo var. makuwa][more]
KAA0048380.15.5e-4876.92putative mitochondrial protein [Cucumis melo var. makuwa][more]
KAA0047478.19.4e-4876.07hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa][more]
KAA0053734.19.4e-4876.07putative mitochondrial protein [Cucumis melo var. makuwa][more]
BLAST of PI0005217 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0005217.1PI0005217.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane