PI0004692 (gene) Melon (PI 482460) v1

Overview


Name	PI0004692
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Late embryogenesis abundant protein (LEA) family protein
Location	chr01: 20027371 .. 20029309 (+)
RNA-Seq Expression	PI0004692
Synteny	PI0004692

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCATCAGCTGAGATCTGATTATAAGTGTAAAAAAAAAGTGAACTAATTAATTAGAGATAAAAATAATAATTATTAGATTGAAGAATGGCAAGCTTTTTGGCAACACCAGCAACCCTTCCAAAGCTTCAACGTGCTGGATCTATTATTGTACACAACCCGTGGAGTTCTAAAGTTTTTGTCTCTCTCAGACCAAGACATGTTAGTTTTCATATTCCCCTATAATAAATACCTATTTCTTCCATGTTTTTTCTTACTTTCTCAGTTTGTCTTAAATCGTTAAAATGTTTATAATTAAATTTATCATATTTCATTAGTTTACATTTCAAGTTAATCGATGATTTACATTGACATGTGTAATTCCCTTGATATCATTTTTTCTCTAATTAACATTGACCCACAAGTGTTATAGGTATTTTTTTTTTCTCTTGAAGTAGATTGTATAAGTTTGAGCATAGTTTTTTTTTCATGCATTGAGTAGAAATTGTTTGAAAAGGCCACAGTAAAGTGTAGTACACAAAGAGAAACTATAAAAGTATTTCGGAAAATGGTTGCTTGGAAACATATACATCCTCTGACATCCATACAATTATGATCGCGTATGTATGTGTGTATATATATCTCAAGAGGTTTTATTTTTGTTGAAAATTTTTGAAAATATGGGTTTTCTAATGATAATAAAAAAGAAAGATTATTGGAAATGGAAAATGTGTGTAGGTAAGTTCACAGATTAGTGCAGCAGCAGCTGATGGAGCTGCTCAAGTTGTGAAGCGAACCACCGAGAAGGCCGCCGAAGAAGTCAAAGATAAGGCCGTCTCTGCTGCCGAGGAGGTATATATTATTTACAATAACCAACTCTTTTCACATTTGTCATACTCAAAACTTTTTAACTTTTATATGTATTTGTTTGATTCTCAAAGACACACGTATACATTATGTATTTGTGATGGGTAGCATTTGTAGGACTTCTCAAAATTAAGTATATAATATAATAACTTTTTTTAATTACATAGCAAAATCTATACTCTATCGTTAATAAACTTCGATTAGTGTGATTGATTTTATTCAATAATAGTATTCTACCAATGATACGGTCTTTCTTAATACACTCCAAGAATTAGATCTAAAGTTTGTTACATTTACAAATTCTTTTCCATTGTAATATACCTATTGATCTTTTAGGTATGATTGCTATATTTGAAGTTGGTATTAATTTATTATGAAATTGGACAAATAAAATCATATTTTTTTTATGTAAACATTAATCAACAACTTAGATTTCAATATTGAATGTTTGAATAATTTAATTATTATATTCTCTAATTTGTAACGATTTCTAGTTCATCAAAATTTAGTATGTACTAACTACTGTCTATATAGTCGTCTAAGCAAAATATATTTAATTGAAAGTGCTAGACTAAATTATTACGTATTCAAATTCAAAAACCAATCAAATCATGAAAAACTAAAGTTGAAGATCAACTACTCAGGTAAGTATTTCTTTTTTCAATGATGGGTTATTAAAACAAAAATGTAGGTGACTCAAAAAACAAAAGAAGTCGCAGGGAAGGTGAATGAAACAGCACAAGATTTGGCTGGAAAGGCAAAGCAAACAGTAGAAGATGCATGGGGATCAGTGAAGGATACAACTCAAAACATTAAAGAGAAAGTCGTTGGGAAAGCTGAAGAATCTAAAGAAGCCATTAAAGACACTGCAGAAAACATCAAAAACAATATCAAGTCAAACTGTTGAACATTATTCCTTAGATTTCTTCTATATTATTATTACACTTGCATCTATTATATTTTCCATAATGCTTTTTCATTATGTTCCCCATTTCATACAAAATGGGAAACTTTTGTTTCTCAAGTTGGTTACCATATTCAACATTAGTGCCCATTAATTGGTATATTAAATAAAATCCTCACTATCTTCTTTC

mRNA sequence

TTTCATCAGCTGAGATCTGATTATAAGTGTAAAAAAAAAGTGAACTAATTAATTAGAGATAAAAATAATAATTATTAGATTGAAGAATGGCAAGCTTTTTGGCAACACCAGCAACCCTTCCAAAGCTTCAACGTGCTGGATCTATTATTGTACACAACCCGTGGAGTTCTAAAGTTTTTGTCTCTCTCAGACCAAGACATGTAAGTTCACAGATTAGTGCAGCAGCAGCTGATGGAGCTGCTCAAGTTGTGAAGCGAACCACCGAGAAGGCCGCCGAAGAAGTCAAAGATAAGGCCGTCTCTGCTGCCGAGGAGGTGACTCAAAAAACAAAAGAAGTCGCAGGGAAGGTGAATGAAACAGCACAAGATTTGGCTGGAAAGGCAAAGCAAACAGTAGAAGATGCATGGGGATCAGTGAAGGATACAACTCAAAACATTAAAGAGAAAGTCGTTGGGAAAGCTGAAGAATCTAAAGAAGCCATTAAAGACACTGCAGAAAACATCAAAAACAATATCAAGTCAAACTGTTGAACATTATTCCTTAGATTTCTTCTATATTATTATTACACTTGCATCTATTATATTTTCCATAATGCTTTTTCATTATGTTCCCCATTTCATACAAAATGGGAAACTTTTGTTTCTCAAGTTGGTTACCATATTCAACATTAGTGCCCATTAATTGGTATATTAAATAAAATCCTCACTATCTTCTTTC

Coding sequence (CDS)

ATGGCAAGCTTTTTGGCAACACCAGCAACCCTTCCAAAGCTTCAACGTGCTGGATCTATTATTGTACACAACCCGTGGAGTTCTAAAGTTTTTGTCTCTCTCAGACCAAGACATGTAAGTTCACAGATTAGTGCAGCAGCAGCTGATGGAGCTGCTCAAGTTGTGAAGCGAACCACCGAGAAGGCCGCCGAAGAAGTCAAAGATAAGGCCGTCTCTGCTGCCGAGGAGGTGACTCAAAAAACAAAAGAAGTCGCAGGGAAGGTGAATGAAACAGCACAAGATTTGGCTGGAAAGGCAAAGCAAACAGTAGAAGATGCATGGGGATCAGTGAAGGATACAACTCAAAACATTAAAGAGAAAGTCGTTGGGAAAGCTGAAGAATCTAAAGAAGCCATTAAAGACACTGCAGAAAACATCAAAAACAATATCAAGTCAAACTGTTGA

Protein sequence

MASFLATPATLPKLQRAGSIIVHNPWSSKVFVSLRPRHVSSQISAAAADGAAQVVKRTTEKAAEEVKDKAVSAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC

Homology

[Close]

BLAST of PI0004692 vs. ExPASy Swiss-Prot
Match: Q8LFD5 (Uncharacterized protein At4g13230 OS=Arabidopsis thaliana OX=3702 GN=At4g13230 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.5e-10
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 53  QVVKRTTEKAAEEVKDKAVSAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKD 112
           ++V  TT    + V DKA  A ++V +K  E A  +++ A +L  KAK T E+AW  VKD
Sbjct: 24  RLVHGTTSTRKDSVCDKATEAQQKVAKKADEGAQTISDAAGNLKDKAKNTAEEAWDKVKD 83

Query: 113 TTQNIKEKVVGKAEESKEAIKDTAENIKNNIKS 146
           TT+ IK+ V GK EE+KE+IK TA+ ++ ++ +
Sbjct: 84  TTEKIKDTVTGKTEETKESIKATAKTVERSMNT 116

[Close]

BLAST of PI0004692 vs. ExPASy TrEMBL
Match: A0A1S3C7D4 (uncharacterized protein At4g13230 OS=Cucumis melo OX=3656 GN=LOC103497533 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.2e-63
Identity = 139/147 (94.56%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MASFLATPATLPKLQRAGSIIVHNPWSSKVFVSLRPRHVSSQISAAAADGAAQVVKRTTE 60
           MASFLAT ATLPKLQRAGSIIVHNPWSSKVFVSLRPRH SSQ+S AAADGAAQ VKRTTE
Sbjct: 1   MASFLATSATLPKLQRAGSIIVHNPWSSKVFVSLRPRHGSSQVS-AAADGAAQAVKRTTE 60

Query: 61  KAAEEVKDKAVSAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKDTTQNIKEK 120
           KAAEEVKDKAVSAAEEVTQKTK+VAGKV+ETAQD+AGKAKQTVEDAWGSVKDTTQNIKEK
Sbjct: 61  KAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKEK 120

Query: 121 VVGKAEESKEAIKDTAENIKNNIKSNC 148
           VVGKAEESKEAIKDTAENIKNNIKSNC
Sbjct: 121 VVGKAEESKEAIKDTAENIKNNIKSNC 146

[Close]

BLAST of PI0004692 vs. ExPASy TrEMBL
Match: A0A0A0K9U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336500 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.6e-61
Identity = 132/147 (89.80%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MASFLATPATLPKLQRAGSIIVHNPWSSKVFVSLRPRHVSSQISAAAADGAAQVVKRTTE 60
           MASFLAT AT+PKLQRAGSIIVHNPWSS VFVSLRPRH SSQ++AAAAD AA VVKRTTE
Sbjct: 1   MASFLATSATIPKLQRAGSIIVHNPWSSNVFVSLRPRHGSSQVTAAAADEAAHVVKRTTE 60

Query: 61  KAAEEVKDKAVSAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKDTTQNIKEK 120
           +AAEEVKDKAVSAA+EVTQ+TKEVAGKV+ETAQD+AGKAKQTVEDAWGSVKDTTQNIK+K
Sbjct: 61  RAAEEVKDKAVSAADEVTQRTKEVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKQK 120

Query: 121 VVGKAEESKEAIKDTAENIKNNIKSNC 148
           VVGKAEESKEAIKDTAENIK NIKSNC
Sbjct: 121 VVGKAEESKEAIKDTAENIKKNIKSNC 147

[Close]

BLAST of PI0004692 vs. ExPASy TrEMBL
Match: A0A6J1DGG7 (uncharacterized protein At4g13230 OS=Momordica charantia OX=3673 GN=LOC111020221 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.5e-53
Identity = 122/149 (81.88%), Postives = 135/149 (90.60%), Query Frame = 0


Query: 1   MASFLATPATLPKLQRAGSIIVHNPWSSKVFVSLRPRHVSSQ--ISAAAADGAAQVVKRT 60
           MAS LA+ AT+ KL RAGS++V +PWSS+VFVS+RPRH SS    +AAAADGAAQ VKR 
Sbjct: 1   MASSLASAATISKLNRAGSVLVRSPWSSRVFVSVRPRHASSSQFAAAAAADGAAQGVKRA 60

Query: 61  TEKAAEEVKDKAVSAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKDTTQNIK 120
           TEKAAEEVKDKA SAAEEVTQKTKEVAGKV+ETAQDLAGKAKQTV++AWGSVKDTTQNIK
Sbjct: 61  TEKAAEEVKDKASSAAEEVTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQNIK 120

Query: 121 EKVVGKAEESKEAIKDTAENIKNNIKSNC 148
           EKVVGKAEESKEAIKDTA+NIK+ IKSNC
Sbjct: 121 EKVVGKAEESKEAIKDTADNIKDKIKSNC 149

[Close]

BLAST of PI0004692 vs. ExPASy TrEMBL
Match: A0A1Q3BS03 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_14160 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 4.2e-27
Identity = 75/134 (55.97%), Postives = 99/134 (73.88%), Query Frame = 0


Query: 19  SIIVHNPWSSKVFVSLRPRHV----SSQISAAAADGAAQVVKR---TTEKAAEEVKDKAV 78
           ++++ NPWSS+VFV +  R +    S Q +++A D A Q  K+     +K  E+VKDKA 
Sbjct: 3   AVLIRNPWSSRVFVPVTKRQIHASGSRQEASSACDKATQAAKQGANEAKKTCEDVKDKAA 62

Query: 79  SAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEA 138
           S AE+VT+K ++ A KV ETAQDL  KAKQTV+DAWGSVKDTT  IK+ VVGKAEESKE+
Sbjct: 63  SNAEQVTKKAEDAADKVKETAQDLTQKAKQTVQDAWGSVKDTTTKIKDTVVGKAEESKES 122

Query: 139 IKDTAENIKNNIKS 146
           IK+TAEN+K N+K+
Sbjct: 123 IKETAENVKRNVKN 136

[Close]

BLAST of PI0004692 vs. ExPASy TrEMBL
Match: A0A5B7AK94 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_024954 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.2e-26
Identity = 81/162 (50.00%), Postives = 107/162 (66.05%), Query Frame = 0


Query: 1   MASFLATPATLPKLQRAGSIIVHNPWSSKVFVSLRP-------RHVSSQISAAAADGAAQ 60
           MAS +A   TL K Q    I V +PWSS+VFV + P       RH S+  + +A + AA 
Sbjct: 14  MAS-MALTTTLSKFQHTTGIAVRSPWSSRVFVGIAPRPFQGSCRHESTATAKSAYNKAAD 73

Query: 61  VVKR----------TTEKAAEEVKDKAVSAAEEVTQKTKEVAGKVNETAQDLAGKAKQTV 120
              +            +K  +++K+KA S AE+VT K+K+VAGKV+ETAQDLA KAKQT 
Sbjct: 74  AANQGADAAKQGAHEAKKVGQDMKNKAASTAEDVTHKSKDVAGKVSETAQDLAEKAKQTA 133

Query: 121 EDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKS 146
           +DAWGSVKDTTQ IKE V GKAEESK++IKD+AEN+K ++ +
Sbjct: 134 QDAWGSVKDTTQKIKETVAGKAEESKDSIKDSAENVKRSMNT 174

[Close]

BLAST of PI0004692 vs. NCBI nr
Match: XP_008457975.1 (PREDICTED: uncharacterized protein At4g13230 [Cucumis melo])

HSP 1 Score: 250.0 bits (637), Expect = 1.3e-62
Identity = 139/147 (94.56%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MASFLATPATLPKLQRAGSIIVHNPWSSKVFVSLRPRHVSSQISAAAADGAAQVVKRTTE 60
           MASFLAT ATLPKLQRAGSIIVHNPWSSKVFVSLRPRH SSQ+S AAADGAAQ VKRTTE
Sbjct: 1   MASFLATSATLPKLQRAGSIIVHNPWSSKVFVSLRPRHGSSQVS-AAADGAAQAVKRTTE 60

Query: 61  KAAEEVKDKAVSAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKDTTQNIKEK 120
           KAAEEVKDKAVSAAEEVTQKTK+VAGKV+ETAQD+AGKAKQTVEDAWGSVKDTTQNIKEK
Sbjct: 61  KAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKEK 120

Query: 121 VVGKAEESKEAIKDTAENIKNNIKSNC 148
           VVGKAEESKEAIKDTAENIKNNIKSNC
Sbjct: 121 VVGKAEESKEAIKDTAENIKNNIKSNC 146

[Close]

BLAST of PI0004692 vs. NCBI nr
Match: XP_011659168.1 (uncharacterized protein At4g13230 [Cucumis sativus] >KGN44571.1 hypothetical protein Csa_016428 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60
Identity = 132/147 (89.80%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MASFLATPATLPKLQRAGSIIVHNPWSSKVFVSLRPRHVSSQISAAAADGAAQVVKRTTE 60
           MASFLAT AT+PKLQRAGSIIVHNPWSS VFVSLRPRH SSQ++AAAAD AA VVKRTTE
Sbjct: 1   MASFLATSATIPKLQRAGSIIVHNPWSSNVFVSLRPRHGSSQVTAAAADEAAHVVKRTTE 60

Query: 61  KAAEEVKDKAVSAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKDTTQNIKEK 120
           +AAEEVKDKAVSAA+EVTQ+TKEVAGKV+ETAQD+AGKAKQTVEDAWGSVKDTTQNIK+K
Sbjct: 61  RAAEEVKDKAVSAADEVTQRTKEVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKQK 120

Query: 121 VVGKAEESKEAIKDTAENIKNNIKSNC 148
           VVGKAEESKEAIKDTAENIK NIKSNC
Sbjct: 121 VVGKAEESKEAIKDTAENIKKNIKSNC 147

[Close]

BLAST of PI0004692 vs. NCBI nr
Match: XP_038897424.1 (uncharacterized protein At4g13230 [Benincasa hispida])

HSP 1 Score: 228.8 bits (582), Expect = 3.1e-56
Identity = 125/147 (85.03%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 1   MASFLATPATLPKLQRAGSIIVHNPWSSKVFVSLRPRHVSSQISAAAADGAAQVVKRTTE 60
           MASFLA  ATLPKL RA SI V  PWSSKVFVS+RP+H SS+++AAAADGAAQVVKR TE
Sbjct: 1   MASFLAPSATLPKLHRARSIHVRTPWSSKVFVSVRPKHESSKVAAAAADGAAQVVKRATE 60

Query: 61  KAAEEVKDKAVSAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKDTTQNIKEK 120
           KAAE+VKDKAVSAA+EVTQKTKEVAGKV+ETAQDLAGKAKQTV+DAWGSVKDTTQNIKEK
Sbjct: 61  KAAEDVKDKAVSAADEVTQKTKEVAGKVSETAQDLAGKAKQTVQDAWGSVKDTTQNIKEK 120

Query: 121 VVGKAEESKEAIKDTAENIKNNIKSNC 148
           VVGKAEESKEAIKDTA+N+K NIK+NC
Sbjct: 121 VVGKAEESKEAIKDTADNLKKNIKTNC 147

[Close]

BLAST of PI0004692 vs. NCBI nr
Match: XP_022152517.1 (uncharacterized protein At4g13230 [Momordica charantia])

HSP 1 Score: 217.2 bits (552), Expect = 9.2e-53
Identity = 122/149 (81.88%), Postives = 135/149 (90.60%), Query Frame = 0


Query: 1   MASFLATPATLPKLQRAGSIIVHNPWSSKVFVSLRPRHVSSQ--ISAAAADGAAQVVKRT 60
           MAS LA+ AT+ KL RAGS++V +PWSS+VFVS+RPRH SS    +AAAADGAAQ VKR 
Sbjct: 1   MASSLASAATISKLNRAGSVLVRSPWSSRVFVSVRPRHASSSQFAAAAAADGAAQGVKRA 60

Query: 61  TEKAAEEVKDKAVSAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKDTTQNIK 120
           TEKAAEEVKDKA SAAEEVTQKTKEVAGKV+ETAQDLAGKAKQTV++AWGSVKDTTQNIK
Sbjct: 61  TEKAAEEVKDKASSAAEEVTQKTKEVAGKVSETAQDLAGKAKQTVQEAWGSVKDTTQNIK 120

Query: 121 EKVVGKAEESKEAIKDTAENIKNNIKSNC 148
           EKVVGKAEESKEAIKDTA+NIK+ IKSNC
Sbjct: 121 EKVVGKAEESKEAIKDTADNIKDKIKSNC 149

[Close]

BLAST of PI0004692 vs. NCBI nr
Match: GAV70662.1 (hypothetical protein CFOL_v3_14160, partial [Cephalotus follicularis])

HSP 1 Score: 131.0 bits (328), Expect = 8.7e-27
Identity = 75/134 (55.97%), Postives = 99/134 (73.88%), Query Frame = 0


Query: 19  SIIVHNPWSSKVFVSLRPRHV----SSQISAAAADGAAQVVKR---TTEKAAEEVKDKAV 78
           ++++ NPWSS+VFV +  R +    S Q +++A D A Q  K+     +K  E+VKDKA 
Sbjct: 3   AVLIRNPWSSRVFVPVTKRQIHASGSRQEASSACDKATQAAKQGANEAKKTCEDVKDKAA 62

Query: 79  SAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEA 138
           S AE+VT+K ++ A KV ETAQDL  KAKQTV+DAWGSVKDTT  IK+ VVGKAEESKE+
Sbjct: 63  SNAEQVTKKAEDAADKVKETAQDLTQKAKQTVQDAWGSVKDTTTKIKDTVVGKAEESKES 122

Query: 139 IKDTAENIKNNIKS 146
           IK+TAEN+K N+K+
Sbjct: 123 IKETAENVKRNVKN 136

[Close]

BLAST of PI0004692 vs. TAIR 10
Match: AT4G13230.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 65.9 bits (159), Expect = 3.2e-11
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 53  QVVKRTTEKAAEEVKDKAVSAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKD 112
           ++V  TT    + V DKA  A ++V +K  E A  +++ A +L  KAK T E+AW  VKD
Sbjct: 24  RLVHGTTSTRKDSVCDKATEAQQKVAKKADEGAQTISDAAGNLKDKAKNTAEEAWDKVKD 83

Query: 113 TTQNIKEKVVGKAEESKEAIKDTAENIKNNIKS 146
           TT+ IK+ V GK EE+KE+IK TA+ ++ ++ +
Sbjct: 84  TTEKIKDTVTGKTEETKESIKATAKTVERSMNT 116

[Close]

BLAST of PI0004692 vs. TAIR 10
Match: AT1G04670.1 (unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 6.4e-04
Identity = 34/101 (33.66%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 29  KVFVSLRPRHVSSQISAAAAD---GAAQVVK---RTTEKAAEEVKDKAVSAAEEVTQKTK 88
           + FVS  PR +  +  A        AA+ VK   +  ++  E ++D A + A  VT+ TK
Sbjct: 24  RTFVSASPRPLQGKEEAEQCQKVKEAAEAVKEGAKQVKETTEYIQDVASTTAGRVTKMTK 83

Query: 89  EVAGKVNETAQDLAGKAKQTVEDAWGSVKDTTQNIKEKVVG 124
           +V  KV ET   +  KAK +V    G+ K+ T  IK K++G
Sbjct: 84  DVTEKVTETTDTITEKAKGSVSGVLGTAKNATDIIKNKILG 124

The following BLAST results are available for this feature:

BLAST of PI0004692 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFD5	4.5e-10	41.94	Uncharacterized protein At4g13230 OS=Arabidopsis thaliana OX=3702 GN=At4g13230 P...	[more]

BLAST of PI0004692 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7D4	6.2e-63	94.56	uncharacterized protein At4g13230 OS=Cucumis melo OX=3656 GN=LOC103497533 PE=4 S...	[more]
A0A0A0K9U4	7.6e-61	89.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336500 PE=4 SV=1	[more]
A0A6J1DGG7	4.5e-53	81.88	uncharacterized protein At4g13230 OS=Momordica charantia OX=3673 GN=LOC111020221...	[more]
A0A1Q3BS03	4.2e-27	55.97	Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]
A0A5B7AK94	1.2e-26	50.00	Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_024954...	[more]

BLAST of PI0004692 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457975.1	1.3e-62	94.56	PREDICTED: uncharacterized protein At4g13230 [Cucumis melo]	[more]
XP_011659168.1	1.6e-60	89.80	uncharacterized protein At4g13230 [Cucumis sativus] >KGN44571.1 hypothetical pro...	[more]
XP_038897424.1	3.1e-56	85.03	uncharacterized protein At4g13230 [Benincasa hispida]	[more]
XP_022152517.1	9.2e-53	81.88	uncharacterized protein At4g13230 [Momordica charantia]	[more]
GAV70662.1	8.7e-27	55.97	hypothetical protein CFOL_v3_14160, partial [Cephalotus follicularis]	[more]

BLAST of PI0004692 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13230.1	3.2e-11	41.94	Late embryogenesis abundant protein (LEA) family protein	[more]
AT1G04670.1	6.4e-04	33.66	unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 122..142
None	No IPR available	COILS	Coil	Coil	coord: 56..83
None	No IPR available	GENE3D	1.20.120.20	Apolipoprotein	coord: 36..147 e-value: 1.0E-11 score: 46.9
None	No IPR available	PANTHER	PTHR47372:SF12	SUBFAMILY NOT NAMED	coord: 1..145
None	No IPR available	PANTHER	PTHR47372	DAUER UP-REGULATED-RELATED	coord: 1..145
None	No IPR available	SUPERFAMILY	58113	Apolipoprotein A-I	coord: 52..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0004692.1	PI0004692.1	mRNA