PI0004692 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCATCAGCTGAGATCTGATTATAAGTGTAAAAAAAAAGTGAACTAATTAATTAGAGATAAAAATAATAATTATTAGATTGAAGAATGGCAAGCTTTTTGGCAACACCAGCAACCCTTCCAAAGCTTCAACGTGCTGGATCTATTATTGTACACAACCCGTGGAGTTCTAAAGTTTTTGTCTCTCTCAGACCAAGACATGTTAGTTTTCATATTCCCCTATAATAAATACCTATTTCTTCCATGTTTTTTCTTACTTTCTCAGTTTGTCTTAAATCGTTAAAATGTTTATAATTAAATTTATCATATTTCATTAGTTTACATTTCAAGTTAATCGATGATTTACATTGACATGTGTAATTCCCTTGATATCATTTTTTCTCTAATTAACATTGACCCACAAGTGTTATAGGTATTTTTTTTTTCTCTTGAAGTAGATTGTATAAGTTTGAGCATAGTTTTTTTTTCATGCATTGAGTAGAAATTGTTTGAAAAGGCCACAGTAAAGTGTAGTACACAAAGAGAAACTATAAAAGTATTTCGGAAAATGGTTGCTTGGAAACATATACATCCTCTGACATCCATACAATTATGATCGCGTATGTATGTGTGTATATATATCTCAAGAGGTTTTATTTTTGTTGAAAATTTTTGAAAATATGGGTTTTCTAATGATAATAAAAAAGAAAGATTATTGGAAATGGAAAATGTGTGTAGGTAAGTTCACAGATTAGTGCAGCAGCAGCTGATGGAGCTGCTCAAGTTGTGAAGCGAACCACCGAGAAGGCCGCCGAAGAAGTCAAAGATAAGGCCGTCTCTGCTGCCGAGGAGGTATATATTATTTACAATAACCAACTCTTTTCACATTTGTCATACTCAAAACTTTTTAACTTTTATATGTATTTGTTTGATTCTCAAAGACACACGTATACATTATGTATTTGTGATGGGTAGCATTTGTAGGACTTCTCAAAATTAAGTATATAATATAATAACTTTTTTTAATTACATAGCAAAATCTATACTCTATCGTTAATAAACTTCGATTAGTGTGATTGATTTTATTCAATAATAGTATTCTACCAATGATACGGTCTTTCTTAATACACTCCAAGAATTAGATCTAAAGTTTGTTACATTTACAAATTCTTTTCCATTGTAATATACCTATTGATCTTTTAGGTATGATTGCTATATTTGAAGTTGGTATTAATTTATTATGAAATTGGACAAATAAAATCATATTTTTTTTATGTAAACATTAATCAACAACTTAGATTTCAATATTGAATGTTTGAATAATTTAATTATTATATTCTCTAATTTGTAACGATTTCTAGTTCATCAAAATTTAGTATGTACTAACTACTGTCTATATAGTCGTCTAAGCAAAATATATTTAATTGAAAGTGCTAGACTAAATTATTACGTATTCAAATTCAAAAACCAATCAAATCATGAAAAACTAAAGTTGAAGATCAACTACTCAGGTAAGTATTTCTTTTTTCAATGATGGGTTATTAAAACAAAAATGTAGGTGACTCAAAAAACAAAAGAAGTCGCAGGGAAGGTGAATGAAACAGCACAAGATTTGGCTGGAAAGGCAAAGCAAACAGTAGAAGATGCATGGGGATCAGTGAAGGATACAACTCAAAACATTAAAGAGAAAGTCGTTGGGAAAGCTGAAGAATCTAAAGAAGCCATTAAAGACACTGCAGAAAACATCAAAAACAATATCAAGTCAAACTGTTGAACATTATTCCTTAGATTTCTTCTATATTATTATTACACTTGCATCTATTATATTTTCCATAATGCTTTTTCATTATGTTCCCCATTTCATACAAAATGGGAAACTTTTGTTTCTCAAGTTGGTTACCATATTCAACATTAGTGCCCATTAATTGGTATATTAAATAAAATCCTCACTATCTTCTTTC TTTCATCAGCTGAGATCTGATTATAAGTGTAAAAAAAAAGTGAACTAATTAATTAGAGATAAAAATAATAATTATTAGATTGAAGAATGGCAAGCTTTTTGGCAACACCAGCAACCCTTCCAAAGCTTCAACGTGCTGGATCTATTATTGTACACAACCCGTGGAGTTCTAAAGTTTTTGTCTCTCTCAGACCAAGACATGTAAGTTCACAGATTAGTGCAGCAGCAGCTGATGGAGCTGCTCAAGTTGTGAAGCGAACCACCGAGAAGGCCGCCGAAGAAGTCAAAGATAAGGCCGTCTCTGCTGCCGAGGAGGTGACTCAAAAAACAAAAGAAGTCGCAGGGAAGGTGAATGAAACAGCACAAGATTTGGCTGGAAAGGCAAAGCAAACAGTAGAAGATGCATGGGGATCAGTGAAGGATACAACTCAAAACATTAAAGAGAAAGTCGTTGGGAAAGCTGAAGAATCTAAAGAAGCCATTAAAGACACTGCAGAAAACATCAAAAACAATATCAAGTCAAACTGTTGAACATTATTCCTTAGATTTCTTCTATATTATTATTACACTTGCATCTATTATATTTTCCATAATGCTTTTTCATTATGTTCCCCATTTCATACAAAATGGGAAACTTTTGTTTCTCAAGTTGGTTACCATATTCAACATTAGTGCCCATTAATTGGTATATTAAATAAAATCCTCACTATCTTCTTTC ATGGCAAGCTTTTTGGCAACACCAGCAACCCTTCCAAAGCTTCAACGTGCTGGATCTATTATTGTACACAACCCGTGGAGTTCTAAAGTTTTTGTCTCTCTCAGACCAAGACATGTAAGTTCACAGATTAGTGCAGCAGCAGCTGATGGAGCTGCTCAAGTTGTGAAGCGAACCACCGAGAAGGCCGCCGAAGAAGTCAAAGATAAGGCCGTCTCTGCTGCCGAGGAGGTGACTCAAAAAACAAAAGAAGTCGCAGGGAAGGTGAATGAAACAGCACAAGATTTGGCTGGAAAGGCAAAGCAAACAGTAGAAGATGCATGGGGATCAGTGAAGGATACAACTCAAAACATTAAAGAGAAAGTCGTTGGGAAAGCTGAAGAATCTAAAGAAGCCATTAAAGACACTGCAGAAAACATCAAAAACAATATCAAGTCAAACTGTTGA MASFLATPATLPKLQRAGSIIVHNPWSSKVFVSLRPRHVSSQISAAAADGAAQVVKRTTEKAAEEVKDKAVSAAEEVTQKTKEVAGKVNETAQDLAGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC Homology
BLAST of PI0004692 vs. ExPASy Swiss-Prot
Match: Q8LFD5 (Uncharacterized protein At4g13230 OS=Arabidopsis thaliana OX=3702 GN=At4g13230 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.5e-10 Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 0
BLAST of PI0004692 vs. ExPASy TrEMBL
Match: A0A1S3C7D4 (uncharacterized protein At4g13230 OS=Cucumis melo OX=3656 GN=LOC103497533 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 6.2e-63 Identity = 139/147 (94.56%), Postives = 143/147 (97.28%), Query Frame = 0
BLAST of PI0004692 vs. ExPASy TrEMBL
Match: A0A0A0K9U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336500 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 7.6e-61 Identity = 132/147 (89.80%), Postives = 141/147 (95.92%), Query Frame = 0
BLAST of PI0004692 vs. ExPASy TrEMBL
Match: A0A6J1DGG7 (uncharacterized protein At4g13230 OS=Momordica charantia OX=3673 GN=LOC111020221 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 4.5e-53 Identity = 122/149 (81.88%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of PI0004692 vs. ExPASy TrEMBL
Match: A0A1Q3BS03 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_14160 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 4.2e-27 Identity = 75/134 (55.97%), Postives = 99/134 (73.88%), Query Frame = 0
BLAST of PI0004692 vs. ExPASy TrEMBL
Match: A0A5B7AK94 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_024954 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.2e-26 Identity = 81/162 (50.00%), Postives = 107/162 (66.05%), Query Frame = 0
BLAST of PI0004692 vs. NCBI nr
Match: XP_008457975.1 (PREDICTED: uncharacterized protein At4g13230 [Cucumis melo]) HSP 1 Score: 250.0 bits (637), Expect = 1.3e-62 Identity = 139/147 (94.56%), Postives = 143/147 (97.28%), Query Frame = 0
BLAST of PI0004692 vs. NCBI nr
Match: XP_011659168.1 (uncharacterized protein At4g13230 [Cucumis sativus] >KGN44571.1 hypothetical protein Csa_016428 [Cucumis sativus]) HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60 Identity = 132/147 (89.80%), Postives = 141/147 (95.92%), Query Frame = 0
BLAST of PI0004692 vs. NCBI nr
Match: XP_038897424.1 (uncharacterized protein At4g13230 [Benincasa hispida]) HSP 1 Score: 228.8 bits (582), Expect = 3.1e-56 Identity = 125/147 (85.03%), Postives = 137/147 (93.20%), Query Frame = 0
BLAST of PI0004692 vs. NCBI nr
Match: XP_022152517.1 (uncharacterized protein At4g13230 [Momordica charantia]) HSP 1 Score: 217.2 bits (552), Expect = 9.2e-53 Identity = 122/149 (81.88%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of PI0004692 vs. NCBI nr
Match: GAV70662.1 (hypothetical protein CFOL_v3_14160, partial [Cephalotus follicularis]) HSP 1 Score: 131.0 bits (328), Expect = 8.7e-27 Identity = 75/134 (55.97%), Postives = 99/134 (73.88%), Query Frame = 0
BLAST of PI0004692 vs. TAIR 10
Match: AT4G13230.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 65.9 bits (159), Expect = 3.2e-11 Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 0
BLAST of PI0004692 vs. TAIR 10
Match: AT1G04670.1 (unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 6.4e-04 Identity = 34/101 (33.66%), Postives = 52/101 (51.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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