Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGAGCGTGTTTTGCATGGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATGTTCGTGAAATTTTTGGTCCGTTGATACTGCTTCAAATATGGGCTTGGGAACGATTTTCCACAATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGGTATGCTATTTTATTTTAATTTAGATCAAACAATAGTTTTAATACCAAATGAGTGATATAATTAATTCAAAACCTAAAATATTAGTTTATTAATACAGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAGTCAATATAGGTACATGTTTGAACTTCTTCAGCGTGATCAGGTACATCAATACTAAAGCTTTAATTATTTTATACATTAGTATACATATATTTAGTGATTTTTAATGTAATGCGTAATATTTTAGATTATTTGGGAGCCTTACAAAAATGTAATACATAATTTACCCAATTTCTGTAAGAATGGTCAACATATATGGCGGACCATCAATCCTCTCATATGTTTTCATATTGGTGAGTGGCATTATCCTGATAGGGTGATCAGACAATTCGGTTTTAAACAAGATGTCCCATCAGAATGCAATATTGAGCCACTCCTGCACAATATTGACTTGAGATCTAGGGATTGGTCAGACAAGGTTGCACATTTAGTCATGCGATGGCAATCTCGTAGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGGATGTGACTTAAGAATACATCCACTAGTATAATAATATTACAAGGCTCTACATCACTCGACCAGGAGCAGTTGTGGGTCATCTGGTACGTATTTAAATATTGAATAATTTTTTAAAATTCTTTACTCAATAACTATTCTCTTATTTTTTTCAATTCACAAAGATCGAACAACAAAAGATTTCGTGATGTTGCAGATGATCCGCAACAAGCCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATATACCTATTGTACCTCCACCAGTTAATAGGGGACGTTTTCGAGTGGAAGAACCTAAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCTGATGATGATGATGATGATACTAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCAGTACCGGATATAATGACTTAGAGTTCGATCCATCGTCTTCATACATGGACATGGACCATCAACTTCCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACAAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAATCGACGACGAAAACCAACCCAAAATCGACGACGTCCGGGTTGTGGAACACATTGA
mRNA sequence
ATGGGTGGAGCGTGTTTTGCATGGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATGTTCGTGAAATTTTTGGTCCGTTGATACTGCTTCAAATATGGGCTTGGGAACGATTTTCCACAATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAGTCAATATAGGTACATGTTTGAACTTCTTCAGCGTGATCAGGCTCTACATCACTCGACCAGGAGCAGTTGTGGGTCATCTGATGATCCGCAACAAGCCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATATACCTATTGTACCTCCACCAGTTAATAGGGGACGTTTTCGAGTGGAAGAACCTAAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCTGATGATGATGATGATGATACTAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCAGTACCGGATATAATGACTTAGAGTTCGATCCATCGTCTTCATACATGGACATGGACCATCAACTTCCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACAAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAATCGACGACGAAAACCAACCCAAAATCGACGACGTCCGGGTTGTGGAACACATTGA
Coding sequence (CDS)
ATGGGTGGAGCGTGTTTTGCATGGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATGTTCGTGAAATTTTTGGTCCGTTGATACTGCTTCAAATATGGGCTTGGGAACGATTTTCCACAATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAGTCAATATAGGTACATGTTTGAACTTCTTCAGCGTGATCAGGCTCTACATCACTCGACCAGGAGCAGTTGTGGGTCATCTGATGATCCGCAACAAGCCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATATACCTATTGTACCTCCACCAGTTAATAGGGGACGTTTTCGAGTGGAAGAACCTAAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCTGATGATGATGATGATGATACTAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCAGTACCGGATATAATGACTTAGAGTTCGATCCATCGTCTTCATACATGGACATGGACCATCAACTTCCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACAAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAATCGACGACGAAAACCAACCCAAAATCGACGACGTCCGGGTTGTGGAACACATTGA
Protein sequence
MGGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGSRWRDQFCVTRSATHVVSQYRYMFELLQRDQALHHSTRSSCGSSDDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNRGRFRVEEPKLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTGYNDLEFDPSSSYMDMDHQLPTDVPDPQEYQQEQENQEELGQPRVQNRRRKPTQNRRRPGCGTH
Homology
BLAST of PI0004521 vs. ExPASy Swiss-Prot
Match:
Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)
HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08
Identity = 35/99 (35.35%), Postives = 49/99 (49.49%), Query Frame = 0
Query: 2 GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAP-QLRHANDHLLPG---- 61
G A A LYR+LC+A+KR V I GPL+LLQ+WAWER P +L+ + G
Sbjct: 222 GSATLALLYRELCRASKRTVSTICGPLVLLQLWAWERLHVGRPGRLKDVGASYMDGIDGP 281
Query: 62 --RAHGSRWRDQFCVTRSATHVVSQYRYMFELLQRDQAL 94
G RWR + + YR F+ + +Q +
Sbjct: 282 LPDPLGCRWRASLSHKENPRGGLDFYRDQFDQQKDEQVI 320
BLAST of PI0004521 vs. ExPASy TrEMBL
Match:
A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)
HSP 1 Score: 323.9 bits (829), Expect = 5.9e-85
Identity = 189/372 (50.81%), Postives = 210/372 (56.45%), Query Frame = 0
Query: 3 GACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGSR 62
G C AWLYRQLCKA+KRDV +I G LILLQIWAWERFST+APQL H NDHLL GRA GSR
Sbjct: 131 GVCLAWLYRQLCKASKRDVHDIAGQLILLQIWAWERFSTIAPQLTHTNDHLLSGRALGSR 190
Query: 63 WRDQFCVTRSATHVVSQYRYMFELLQRDQAL----------------------------- 122
WRDQFCV RSAT+VV+QYRYMF+LLQRDQ +
Sbjct: 191 WRDQFCVIRSATYVVNQYRYMFDLLQRDQIIWEPYKDVIDNLPNFCKNGQDTWRTISPLI 250
Query: 123 -------HHSTRSSCGSS------------------------------------------ 182
HH R SS
Sbjct: 251 CFYIGEWHHPDRGCTFSSTMRSRRRFMTIEVSIQQFDMDVTQEYIHLYNNITRLYITRPG 310
Query: 183 -----------------DDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNRGRFRVEEP 242
+DPQQ LDICNNNERYME+IH +YD+PIVPPPV+R RFRVEE
Sbjct: 311 AIVGHLRSNNARLRDVVNDPQQVLDICNNNERYMEKIHNIYDLPIVPPPVHRERFRVEEA 370
Query: 243 KLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTGYNDLEFDPSSSY 259
+LDEVYHNVEEVPP TQTQSQTGYGS M MM FGAGYCDSEVS GY D P SSY
Sbjct: 371 ELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMP--TFGAGYCDSEVSIGYYDAVVGPLSSY 430
BLAST of PI0004521 vs. ExPASy TrEMBL
Match:
A0A5A7UKC7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G001140 PE=4 SV=1)
HSP 1 Score: 256.9 bits (655), Expect = 8.9e-65
Identity = 170/407 (41.77%), Postives = 199/407 (48.89%), Query Frame = 0
Query: 2 GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS 61
GGAC AWLYRQLCKA+K+ VREI GPLILLQIWAWERF +APQL H N + L GRA+GS
Sbjct: 378 GGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAPQLLHVNANQLHGRAYGS 437
Query: 62 RWRDQFCVTRSATHVVSQYRYMFELLQRDQAL---------------------------- 121
RWRDQFCVTRSATHVVSQYRYMF+LLQ Q +
Sbjct: 438 RWRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPL 497
Query: 122 --------HHSTR------------SSCGS------------------------------ 181
HH R C +
Sbjct: 498 ICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRS 557
Query: 182 ------------------------SDDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNR 241
+DDPQQ L+ICNNNE+YME IHYMYD+PIVP PV R
Sbjct: 558 KLYITQPGAAMSHLRSNNIRLWNVADDPQQVLNICNNNEQYMENIHYMYDVPIVPAPVQR 617
Query: 242 GRFRVEEP-KLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILA-------------FGA 259
R V+EP +L+EV + EEVPP+TQT+S+ Y S +MMM FG
Sbjct: 618 RRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGR 677
BLAST of PI0004521 vs. ExPASy TrEMBL
Match:
A0A5A7TDY5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00990 PE=4 SV=1)
HSP 1 Score: 250.4 bits (638), Expect = 8.3e-63
Identity = 131/217 (60.37%), Postives = 153/217 (70.51%), Query Frame = 0
Query: 2 GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS 61
GG C AWLY+QLCKA+KRDVR+I GPLILLQIWAWERF T+APQL HAN+HLLPGRA GS
Sbjct: 127 GGVCLAWLYKQLCKASKRDVRDIDGPLILLQIWAWERFPTIAPQLTHANNHLLPGRALGS 186
Query: 62 RWRDQFCVTRSATHVVSQYRYMFELLQRDQALHHSTRSSCGSSDDPQQALDICNNNERYM 121
RDQFCVTR ATHVVSQYRYMF+LLQRDQ + + + + + + + R+
Sbjct: 187 --RDQFCVTRLATHVVSQYRYMFDLLQRDQIIWEPYKDVIDNLPNFYWSDRVAHLVVRWQ 246
Query: 122 EEIHYM--------YDIPIVPPPVNRGRFRVEEPKLDEVYHNVEEVPPVTQTQSQTGYGS 181
+M +D+ + ++ GR RVEE +LDEVYHNVEEVPP TQTQSQTGYGS
Sbjct: 247 SRRRFMAIGVSIQQFDMDVTQEYIHWGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGS 306
Query: 182 LMMMMMILAFGAGYCDSEVSTGYNDLEFDPSSSYMDM 211
M MM FGAGYCDSEV TGY D P SSYMD+
Sbjct: 307 PMTMMP--TFGAGYCDSEVGTGYYDAGISPLSSYMDV 339
BLAST of PI0004521 vs. ExPASy TrEMBL
Match:
A0A5D3CT32 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00900 PE=4 SV=1)
HSP 1 Score: 247.3 bits (630), Expect = 7.1e-62
Identity = 163/392 (41.58%), Postives = 200/392 (51.02%), Query Frame = 0
Query: 2 GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS 61
GGAC AWLYRQLCKA+K+ VREI GPLILLQIWAWERF +APQL H N + L GRA+GS
Sbjct: 428 GGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAPQLLHVNANQLHGRAYGS 487
Query: 62 RWRDQFCVTRSATHVVSQYRYMFELLQRDQ---------------ALH------------ 121
RWRDQFCVTRSATHVVSQYRYMF+LLQ Q LH
Sbjct: 488 RWRDQFCVTRSATHVVSQYRYMFDLLQPSQFGIQQAVPRDCNTEPLLHNIDLRTADWSDR 547
Query: 122 --------HSTRSSCGS------------------------------------------- 181
H+ R +
Sbjct: 548 VAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIR 607
Query: 182 ----SDDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNRGRFRVEEP-KLDEVYHNVEE 241
+DD QQ L+ICN+NE+YME IHYMYD+PIV PV + R V+EP +L+EV + EE
Sbjct: 608 LRNVADDLQQVLNICNDNEQYMENIHYMYDVPIVLAPVQKRRPLVQEPDQLEEVDQHGEE 667
Query: 242 VPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTG----------------------Y 259
VPP+TQTQ+Q+ + + +MM+ FG Y DS+V Y
Sbjct: 668 VPPMTQTQTQSEHSYVCPVMMMPTFGTTYYDSKVGQSSDFERGYYNSEAGQSSTNFGQQY 727
BLAST of PI0004521 vs. ExPASy TrEMBL
Match:
A0A5A7TBF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00270 PE=4 SV=1)
HSP 1 Score: 242.3 bits (617), Expect = 2.3e-60
Identity = 148/299 (49.50%), Postives = 170/299 (56.86%), Query Frame = 0
Query: 26 GPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGSRWRDQFCVTRSATHVVSQYRYMFE 85
G LILLQIWAWERFST+APQL HAN+HLLPGRA GSRW+DQFCVTR ATHVVSQYRYMF+
Sbjct: 11 GLLILLQIWAWERFSTIAPQLTHANNHLLPGRALGSRWKDQFCVTRLATHVVSQYRYMFD 70
Query: 86 LLQRDQALHHSTRSSCGS------------------------------------------ 145
LLQRDQ + ++ G+
Sbjct: 71 LLQRDQIIWEPYKNVIGNLPNFCKNGQDIWRTISPLICFHIGVSIQQFDIDVTQEYIHWY 130
Query: 146 ----------------------------SDDPQQALDICNNNERYMEEIHYMYDIPIVPP 205
+DDPQQ L+ICNNN+RYMEEIH MYD+ IVPP
Sbjct: 131 NNITRLYITRPRAAVGHLRSNNARLRDVADDPQQVLNICNNNKRYMEEIHNMYDLSIVPP 190
Query: 206 PVNRGRFRVEEPKLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTG 255
PV+RGR RVEE +LDEVYHNVEEVPP TQTQSQTGYGS M MM FGAGY DSEV TG
Sbjct: 191 PVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMP--TFGAGYYDSEVGTG 250
BLAST of PI0004521 vs. NCBI nr
Match:
TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 323.9 bits (829), Expect = 1.2e-84
Identity = 189/372 (50.81%), Postives = 210/372 (56.45%), Query Frame = 0
Query: 3 GACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGSR 62
G C AWLYRQLCKA+KRDV +I G LILLQIWAWERFST+APQL H NDHLL GRA GSR
Sbjct: 131 GVCLAWLYRQLCKASKRDVHDIAGQLILLQIWAWERFSTIAPQLTHTNDHLLSGRALGSR 190
Query: 63 WRDQFCVTRSATHVVSQYRYMFELLQRDQAL----------------------------- 122
WRDQFCV RSAT+VV+QYRYMF+LLQRDQ +
Sbjct: 191 WRDQFCVIRSATYVVNQYRYMFDLLQRDQIIWEPYKDVIDNLPNFCKNGQDTWRTISPLI 250
Query: 123 -------HHSTRSSCGSS------------------------------------------ 182
HH R SS
Sbjct: 251 CFYIGEWHHPDRGCTFSSTMRSRRRFMTIEVSIQQFDMDVTQEYIHLYNNITRLYITRPG 310
Query: 183 -----------------DDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNRGRFRVEEP 242
+DPQQ LDICNNNERYME+IH +YD+PIVPPPV+R RFRVEE
Sbjct: 311 AIVGHLRSNNARLRDVVNDPQQVLDICNNNERYMEKIHNIYDLPIVPPPVHRERFRVEEA 370
Query: 243 KLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTGYNDLEFDPSSSY 259
+LDEVYHNVEEVPP TQTQSQTGYGS M MM FGAGYCDSEVS GY D P SSY
Sbjct: 371 ELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMP--TFGAGYCDSEVSIGYYDAVVGPLSSY 430
BLAST of PI0004521 vs. NCBI nr
Match:
KAA0055624.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 256.9 bits (655), Expect = 1.8e-64
Identity = 170/407 (41.77%), Postives = 199/407 (48.89%), Query Frame = 0
Query: 2 GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS 61
GGAC AWLYRQLCKA+K+ VREI GPLILLQIWAWERF +APQL H N + L GRA+GS
Sbjct: 378 GGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAPQLLHVNANQLHGRAYGS 437
Query: 62 RWRDQFCVTRSATHVVSQYRYMFELLQRDQAL---------------------------- 121
RWRDQFCVTRSATHVVSQYRYMF+LLQ Q +
Sbjct: 438 RWRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPL 497
Query: 122 --------HHSTR------------SSCGS------------------------------ 181
HH R C +
Sbjct: 498 ICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRS 557
Query: 182 ------------------------SDDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNR 241
+DDPQQ L+ICNNNE+YME IHYMYD+PIVP PV R
Sbjct: 558 KLYITQPGAAMSHLRSNNIRLWNVADDPQQVLNICNNNEQYMENIHYMYDVPIVPAPVQR 617
Query: 242 GRFRVEEP-KLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILA-------------FGA 259
R V+EP +L+EV + EEVPP+TQT+S+ Y S +MMM FG
Sbjct: 618 RRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGR 677
BLAST of PI0004521 vs. NCBI nr
Match:
KAA0041168.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 250.4 bits (638), Expect = 1.7e-62
Identity = 131/217 (60.37%), Postives = 153/217 (70.51%), Query Frame = 0
Query: 2 GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS 61
GG C AWLY+QLCKA+KRDVR+I GPLILLQIWAWERF T+APQL HAN+HLLPGRA GS
Sbjct: 127 GGVCLAWLYKQLCKASKRDVRDIDGPLILLQIWAWERFPTIAPQLTHANNHLLPGRALGS 186
Query: 62 RWRDQFCVTRSATHVVSQYRYMFELLQRDQALHHSTRSSCGSSDDPQQALDICNNNERYM 121
RDQFCVTR ATHVVSQYRYMF+LLQRDQ + + + + + + + R+
Sbjct: 187 --RDQFCVTRLATHVVSQYRYMFDLLQRDQIIWEPYKDVIDNLPNFYWSDRVAHLVVRWQ 246
Query: 122 EEIHYM--------YDIPIVPPPVNRGRFRVEEPKLDEVYHNVEEVPPVTQTQSQTGYGS 181
+M +D+ + ++ GR RVEE +LDEVYHNVEEVPP TQTQSQTGYGS
Sbjct: 247 SRRRFMAIGVSIQQFDMDVTQEYIHWGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGS 306
Query: 182 LMMMMMILAFGAGYCDSEVSTGYNDLEFDPSSSYMDM 211
M MM FGAGYCDSEV TGY D P SSYMD+
Sbjct: 307 PMTMMP--TFGAGYCDSEVGTGYYDAGISPLSSYMDV 339
BLAST of PI0004521 vs. NCBI nr
Match:
TYK14590.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 247.3 bits (630), Expect = 1.5e-61
Identity = 163/392 (41.58%), Postives = 200/392 (51.02%), Query Frame = 0
Query: 2 GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS 61
GGAC AWLYRQLCKA+K+ VREI GPLILLQIWAWERF +APQL H N + L GRA+GS
Sbjct: 428 GGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAPQLLHVNANQLHGRAYGS 487
Query: 62 RWRDQFCVTRSATHVVSQYRYMFELLQRDQ---------------ALH------------ 121
RWRDQFCVTRSATHVVSQYRYMF+LLQ Q LH
Sbjct: 488 RWRDQFCVTRSATHVVSQYRYMFDLLQPSQFGIQQAVPRDCNTEPLLHNIDLRTADWSDR 547
Query: 122 --------HSTRSSCGS------------------------------------------- 181
H+ R +
Sbjct: 548 VAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIR 607
Query: 182 ----SDDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNRGRFRVEEP-KLDEVYHNVEE 241
+DD QQ L+ICN+NE+YME IHYMYD+PIV PV + R V+EP +L+EV + EE
Sbjct: 608 LRNVADDLQQVLNICNDNEQYMENIHYMYDVPIVLAPVQKRRPLVQEPDQLEEVDQHGEE 667
Query: 242 VPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTG----------------------Y 259
VPP+TQTQ+Q+ + + +MM+ FG Y DS+V Y
Sbjct: 668 VPPMTQTQTQSEHSYVCPVMMMPTFGTTYYDSKVGQSSDFERGYYNSEAGQSSTNFGQQY 727
BLAST of PI0004521 vs. NCBI nr
Match:
KAA0038951.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 242.3 bits (617), Expect = 4.7e-60
Identity = 148/299 (49.50%), Postives = 170/299 (56.86%), Query Frame = 0
Query: 26 GPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGSRWRDQFCVTRSATHVVSQYRYMFE 85
G LILLQIWAWERFST+APQL HAN+HLLPGRA GSRW+DQFCVTR ATHVVSQYRYMF+
Sbjct: 11 GLLILLQIWAWERFSTIAPQLTHANNHLLPGRALGSRWKDQFCVTRLATHVVSQYRYMFD 70
Query: 86 LLQRDQALHHSTRSSCGS------------------------------------------ 145
LLQRDQ + ++ G+
Sbjct: 71 LLQRDQIIWEPYKNVIGNLPNFCKNGQDIWRTISPLICFHIGVSIQQFDIDVTQEYIHWY 130
Query: 146 ----------------------------SDDPQQALDICNNNERYMEEIHYMYDIPIVPP 205
+DDPQQ L+ICNNN+RYMEEIH MYD+ IVPP
Sbjct: 131 NNITRLYITRPRAAVGHLRSNNARLRDVADDPQQVLNICNNNKRYMEEIHNMYDLSIVPP 190
Query: 206 PVNRGRFRVEEPKLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTG 255
PV+RGR RVEE +LDEVYHNVEEVPP TQTQSQTGYGS M MM FGAGY DSEV TG
Sbjct: 191 PVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMP--TFGAGYYDSEVGTG 250
BLAST of PI0004521 vs. TAIR 10
Match:
AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )
HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 35/99 (35.35%), Postives = 49/99 (49.49%), Query Frame = 0
Query: 2 GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAP-QLRHANDHLLPG---- 61
G A A LYR+LC+A+KR V I GPL+LLQ+WAWER P +L+ + G
Sbjct: 222 GSATLALLYRELCRASKRTVSTICGPLVLLQLWAWERLHVGRPGRLKDVGASYMDGIDGP 281
Query: 62 --RAHGSRWRDQFCVTRSATHVVSQYRYMFELLQRDQAL 94
G RWR + + YR F+ + +Q +
Sbjct: 282 LPDPLGCRWRASLSHKENPRGGLDFYRDQFDQQKDEQVI 320
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9LNG5 | 1.9e-08 | 35.35 | Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DJV7 | 5.9e-85 | 50.81 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5A7UKC7 | 8.9e-65 | 41.77 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5A7TDY5 | 8.3e-63 | 60.37 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5D3CT32 | 7.1e-62 | 41.58 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
| A0A5A7TBF8 | 2.3e-60 | 49.50 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK23842.1 | 1.2e-84 | 50.81 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| KAA0055624.1 | 1.8e-64 | 41.77 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| KAA0041168.1 | 1.7e-62 | 60.37 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| TYK14590.1 | 1.5e-61 | 41.58 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
| KAA0038951.1 | 4.7e-60 | 49.50 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G48120.1 | 1.4e-09 | 35.35 | hydrolases;protein serine/threonine phosphatases | [more] |
