PI0004521 (gene) Melon (PI 482460) v1

Overview
NamePI0004521
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Locationchr04: 16973169 .. 16974590 (-)
RNA-Seq ExpressionPI0004521
SyntenyPI0004521
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGAGCGTGTTTTGCATGGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATGTTCGTGAAATTTTTGGTCCGTTGATACTGCTTCAAATATGGGCTTGGGAACGATTTTCCACAATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGGTATGCTATTTTATTTTAATTTAGATCAAACAATAGTTTTAATACCAAATGAGTGATATAATTAATTCAAAACCTAAAATATTAGTTTATTAATACAGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAGTCAATATAGGTACATGTTTGAACTTCTTCAGCGTGATCAGGTACATCAATACTAAAGCTTTAATTATTTTATACATTAGTATACATATATTTAGTGATTTTTAATGTAATGCGTAATATTTTAGATTATTTGGGAGCCTTACAAAAATGTAATACATAATTTACCCAATTTCTGTAAGAATGGTCAACATATATGGCGGACCATCAATCCTCTCATATGTTTTCATATTGGTGAGTGGCATTATCCTGATAGGGTGATCAGACAATTCGGTTTTAAACAAGATGTCCCATCAGAATGCAATATTGAGCCACTCCTGCACAATATTGACTTGAGATCTAGGGATTGGTCAGACAAGGTTGCACATTTAGTCATGCGATGGCAATCTCGTAGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGGATGTGACTTAAGAATACATCCACTAGTATAATAATATTACAAGGCTCTACATCACTCGACCAGGAGCAGTTGTGGGTCATCTGGTACGTATTTAAATATTGAATAATTTTTTAAAATTCTTTACTCAATAACTATTCTCTTATTTTTTTCAATTCACAAAGATCGAACAACAAAAGATTTCGTGATGTTGCAGATGATCCGCAACAAGCCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATATACCTATTGTACCTCCACCAGTTAATAGGGGACGTTTTCGAGTGGAAGAACCTAAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCTGATGATGATGATGATGATACTAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCAGTACCGGATATAATGACTTAGAGTTCGATCCATCGTCTTCATACATGGACATGGACCATCAACTTCCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACAAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAATCGACGACGAAAACCAACCCAAAATCGACGACGTCCGGGTTGTGGAACACATTGA

mRNA sequence

ATGGGTGGAGCGTGTTTTGCATGGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATGTTCGTGAAATTTTTGGTCCGTTGATACTGCTTCAAATATGGGCTTGGGAACGATTTTCCACAATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAGTCAATATAGGTACATGTTTGAACTTCTTCAGCGTGATCAGGCTCTACATCACTCGACCAGGAGCAGTTGTGGGTCATCTGATGATCCGCAACAAGCCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATATACCTATTGTACCTCCACCAGTTAATAGGGGACGTTTTCGAGTGGAAGAACCTAAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCTGATGATGATGATGATGATACTAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCAGTACCGGATATAATGACTTAGAGTTCGATCCATCGTCTTCATACATGGACATGGACCATCAACTTCCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACAAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAATCGACGACGAAAACCAACCCAAAATCGACGACGTCCGGGTTGTGGAACACATTGA

Coding sequence (CDS)

ATGGGTGGAGCGTGTTTTGCATGGTTGTACAGACAACTATGCAAAGCAGCAAAACGAGATGTTCGTGAAATTTTTGGTCCGTTGATACTGCTTCAAATATGGGCTTGGGAACGATTTTCCACAATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAGTCAATATAGGTACATGTTTGAACTTCTTCAGCGTGATCAGGCTCTACATCACTCGACCAGGAGCAGTTGTGGGTCATCTGATGATCCGCAACAAGCCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATATACCTATTGTACCTCCACCAGTTAATAGGGGACGTTTTCGAGTGGAAGAACCTAAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCTGATGATGATGATGATGATACTAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCAGTACCGGATATAATGACTTAGAGTTCGATCCATCGTCTTCATACATGGACATGGACCATCAACTTCCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACAAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAATCGACGACGAAAACCAACCCAAAATCGACGACGTCCGGGTTGTGGAACACATTGA

Protein sequence

MGGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGSRWRDQFCVTRSATHVVSQYRYMFELLQRDQALHHSTRSSCGSSDDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNRGRFRVEEPKLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTGYNDLEFDPSSSYMDMDHQLPTDVPDPQEYQQEQENQEELGQPRVQNRRRKPTQNRRRPGCGTH
Homology
BLAST of PI0004521 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08
Identity = 35/99 (35.35%), Postives = 49/99 (49.49%), Query Frame = 0

Query: 2   GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAP-QLRHANDHLLPG---- 61
           G A  A LYR+LC+A+KR V  I GPL+LLQ+WAWER     P +L+      + G    
Sbjct: 222 GSATLALLYRELCRASKRTVSTICGPLVLLQLWAWERLHVGRPGRLKDVGASYMDGIDGP 281

Query: 62  --RAHGSRWRDQFCVTRSATHVVSQYRYMFELLQRDQAL 94
                G RWR       +    +  YR  F+  + +Q +
Sbjct: 282 LPDPLGCRWRASLSHKENPRGGLDFYRDQFDQQKDEQVI 320

BLAST of PI0004521 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 5.9e-85
Identity = 189/372 (50.81%), Postives = 210/372 (56.45%), Query Frame = 0

Query: 3   GACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGSR 62
           G C AWLYRQLCKA+KRDV +I G LILLQIWAWERFST+APQL H NDHLL GRA GSR
Sbjct: 131 GVCLAWLYRQLCKASKRDVHDIAGQLILLQIWAWERFSTIAPQLTHTNDHLLSGRALGSR 190

Query: 63  WRDQFCVTRSATHVVSQYRYMFELLQRDQAL----------------------------- 122
           WRDQFCV RSAT+VV+QYRYMF+LLQRDQ +                             
Sbjct: 191 WRDQFCVIRSATYVVNQYRYMFDLLQRDQIIWEPYKDVIDNLPNFCKNGQDTWRTISPLI 250

Query: 123 -------HHSTRSSCGSS------------------------------------------ 182
                  HH  R    SS                                          
Sbjct: 251 CFYIGEWHHPDRGCTFSSTMRSRRRFMTIEVSIQQFDMDVTQEYIHLYNNITRLYITRPG 310

Query: 183 -----------------DDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNRGRFRVEEP 242
                            +DPQQ LDICNNNERYME+IH +YD+PIVPPPV+R RFRVEE 
Sbjct: 311 AIVGHLRSNNARLRDVVNDPQQVLDICNNNERYMEKIHNIYDLPIVPPPVHRERFRVEEA 370

Query: 243 KLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTGYNDLEFDPSSSY 259
           +LDEVYHNVEEVPP TQTQSQTGYGS M MM    FGAGYCDSEVS GY D    P SSY
Sbjct: 371 ELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMP--TFGAGYCDSEVSIGYYDAVVGPLSSY 430

BLAST of PI0004521 vs. ExPASy TrEMBL
Match: A0A5A7UKC7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G001140 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 8.9e-65
Identity = 170/407 (41.77%), Postives = 199/407 (48.89%), Query Frame = 0

Query: 2   GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS 61
           GGAC AWLYRQLCKA+K+ VREI GPLILLQIWAWERF  +APQL H N + L GRA+GS
Sbjct: 378 GGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAPQLLHVNANQLHGRAYGS 437

Query: 62  RWRDQFCVTRSATHVVSQYRYMFELLQRDQAL---------------------------- 121
           RWRDQFCVTRSATHVVSQYRYMF+LLQ  Q +                            
Sbjct: 438 RWRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPL 497

Query: 122 --------HHSTR------------SSCGS------------------------------ 181
                   HH  R              C +                              
Sbjct: 498 ICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRS 557

Query: 182 ------------------------SDDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNR 241
                                   +DDPQQ L+ICNNNE+YME IHYMYD+PIVP PV R
Sbjct: 558 KLYITQPGAAMSHLRSNNIRLWNVADDPQQVLNICNNNEQYMENIHYMYDVPIVPAPVQR 617

Query: 242 GRFRVEEP-KLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILA-------------FGA 259
            R  V+EP +L+EV  + EEVPP+TQT+S+  Y S +MMM                 FG 
Sbjct: 618 RRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGR 677

BLAST of PI0004521 vs. ExPASy TrEMBL
Match: A0A5A7TDY5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00990 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 8.3e-63
Identity = 131/217 (60.37%), Postives = 153/217 (70.51%), Query Frame = 0

Query: 2   GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS 61
           GG C AWLY+QLCKA+KRDVR+I GPLILLQIWAWERF T+APQL HAN+HLLPGRA GS
Sbjct: 127 GGVCLAWLYKQLCKASKRDVRDIDGPLILLQIWAWERFPTIAPQLTHANNHLLPGRALGS 186

Query: 62  RWRDQFCVTRSATHVVSQYRYMFELLQRDQALHHSTRSSCGSSDDPQQALDICNNNERYM 121
             RDQFCVTR ATHVVSQYRYMF+LLQRDQ +    +    +  +   +  + +   R+ 
Sbjct: 187 --RDQFCVTRLATHVVSQYRYMFDLLQRDQIIWEPYKDVIDNLPNFYWSDRVAHLVVRWQ 246

Query: 122 EEIHYM--------YDIPIVPPPVNRGRFRVEEPKLDEVYHNVEEVPPVTQTQSQTGYGS 181
               +M        +D+ +    ++ GR RVEE +LDEVYHNVEEVPP TQTQSQTGYGS
Sbjct: 247 SRRRFMAIGVSIQQFDMDVTQEYIHWGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGS 306

Query: 182 LMMMMMILAFGAGYCDSEVSTGYNDLEFDPSSSYMDM 211
            M MM    FGAGYCDSEV TGY D    P SSYMD+
Sbjct: 307 PMTMMP--TFGAGYCDSEVGTGYYDAGISPLSSYMDV 339

BLAST of PI0004521 vs. ExPASy TrEMBL
Match: A0A5D3CT32 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00900 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 7.1e-62
Identity = 163/392 (41.58%), Postives = 200/392 (51.02%), Query Frame = 0

Query: 2   GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS 61
           GGAC AWLYRQLCKA+K+ VREI GPLILLQIWAWERF  +APQL H N + L GRA+GS
Sbjct: 428 GGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAPQLLHVNANQLHGRAYGS 487

Query: 62  RWRDQFCVTRSATHVVSQYRYMFELLQRDQ---------------ALH------------ 121
           RWRDQFCVTRSATHVVSQYRYMF+LLQ  Q                LH            
Sbjct: 488 RWRDQFCVTRSATHVVSQYRYMFDLLQPSQFGIQQAVPRDCNTEPLLHNIDLRTADWSDR 547

Query: 122 --------HSTRSSCGS------------------------------------------- 181
                   H+ R    +                                           
Sbjct: 548 VAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIR 607

Query: 182 ----SDDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNRGRFRVEEP-KLDEVYHNVEE 241
               +DD QQ L+ICN+NE+YME IHYMYD+PIV  PV + R  V+EP +L+EV  + EE
Sbjct: 608 LRNVADDLQQVLNICNDNEQYMENIHYMYDVPIVLAPVQKRRPLVQEPDQLEEVDQHGEE 667

Query: 242 VPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTG----------------------Y 259
           VPP+TQTQ+Q+ +  +  +MM+  FG  Y DS+V                         Y
Sbjct: 668 VPPMTQTQTQSEHSYVCPVMMMPTFGTTYYDSKVGQSSDFERGYYNSEAGQSSTNFGQQY 727

BLAST of PI0004521 vs. ExPASy TrEMBL
Match: A0A5A7TBF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00270 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 2.3e-60
Identity = 148/299 (49.50%), Postives = 170/299 (56.86%), Query Frame = 0

Query: 26  GPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGSRWRDQFCVTRSATHVVSQYRYMFE 85
           G LILLQIWAWERFST+APQL HAN+HLLPGRA GSRW+DQFCVTR ATHVVSQYRYMF+
Sbjct: 11  GLLILLQIWAWERFSTIAPQLTHANNHLLPGRALGSRWKDQFCVTRLATHVVSQYRYMFD 70

Query: 86  LLQRDQALHHSTRSSCGS------------------------------------------ 145
           LLQRDQ +    ++  G+                                          
Sbjct: 71  LLQRDQIIWEPYKNVIGNLPNFCKNGQDIWRTISPLICFHIGVSIQQFDIDVTQEYIHWY 130

Query: 146 ----------------------------SDDPQQALDICNNNERYMEEIHYMYDIPIVPP 205
                                       +DDPQQ L+ICNNN+RYMEEIH MYD+ IVPP
Sbjct: 131 NNITRLYITRPRAAVGHLRSNNARLRDVADDPQQVLNICNNNKRYMEEIHNMYDLSIVPP 190

Query: 206 PVNRGRFRVEEPKLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTG 255
           PV+RGR RVEE +LDEVYHNVEEVPP TQTQSQTGYGS M MM    FGAGY DSEV TG
Sbjct: 191 PVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMP--TFGAGYYDSEVGTG 250

BLAST of PI0004521 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 323.9 bits (829), Expect = 1.2e-84
Identity = 189/372 (50.81%), Postives = 210/372 (56.45%), Query Frame = 0

Query: 3   GACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGSR 62
           G C AWLYRQLCKA+KRDV +I G LILLQIWAWERFST+APQL H NDHLL GRA GSR
Sbjct: 131 GVCLAWLYRQLCKASKRDVHDIAGQLILLQIWAWERFSTIAPQLTHTNDHLLSGRALGSR 190

Query: 63  WRDQFCVTRSATHVVSQYRYMFELLQRDQAL----------------------------- 122
           WRDQFCV RSAT+VV+QYRYMF+LLQRDQ +                             
Sbjct: 191 WRDQFCVIRSATYVVNQYRYMFDLLQRDQIIWEPYKDVIDNLPNFCKNGQDTWRTISPLI 250

Query: 123 -------HHSTRSSCGSS------------------------------------------ 182
                  HH  R    SS                                          
Sbjct: 251 CFYIGEWHHPDRGCTFSSTMRSRRRFMTIEVSIQQFDMDVTQEYIHLYNNITRLYITRPG 310

Query: 183 -----------------DDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNRGRFRVEEP 242
                            +DPQQ LDICNNNERYME+IH +YD+PIVPPPV+R RFRVEE 
Sbjct: 311 AIVGHLRSNNARLRDVVNDPQQVLDICNNNERYMEKIHNIYDLPIVPPPVHRERFRVEEA 370

Query: 243 KLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTGYNDLEFDPSSSY 259
           +LDEVYHNVEEVPP TQTQSQTGYGS M MM    FGAGYCDSEVS GY D    P SSY
Sbjct: 371 ELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMP--TFGAGYCDSEVSIGYYDAVVGPLSSY 430

BLAST of PI0004521 vs. NCBI nr
Match: KAA0055624.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 256.9 bits (655), Expect = 1.8e-64
Identity = 170/407 (41.77%), Postives = 199/407 (48.89%), Query Frame = 0

Query: 2   GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS 61
           GGAC AWLYRQLCKA+K+ VREI GPLILLQIWAWERF  +APQL H N + L GRA+GS
Sbjct: 378 GGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAPQLLHVNANQLHGRAYGS 437

Query: 62  RWRDQFCVTRSATHVVSQYRYMFELLQRDQAL---------------------------- 121
           RWRDQFCVTRSATHVVSQYRYMF+LLQ  Q +                            
Sbjct: 438 RWRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSLPHFCTNGHNIWRTISPL 497

Query: 122 --------HHSTR------------SSCGS------------------------------ 181
                   HH  R              C +                              
Sbjct: 498 ICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVMRWHNRRS 557

Query: 182 ------------------------SDDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNR 241
                                   +DDPQQ L+ICNNNE+YME IHYMYD+PIVP PV R
Sbjct: 558 KLYITQPGAAMSHLRSNNIRLWNVADDPQQVLNICNNNEQYMENIHYMYDVPIVPAPVQR 617

Query: 242 GRFRVEEP-KLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILA-------------FGA 259
            R  V+EP +L+EV  + EEVPP+TQT+S+  Y S +MMM                 FG 
Sbjct: 618 RRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTYYDSGVGQSSDFGR 677

BLAST of PI0004521 vs. NCBI nr
Match: KAA0041168.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-62
Identity = 131/217 (60.37%), Postives = 153/217 (70.51%), Query Frame = 0

Query: 2   GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS 61
           GG C AWLY+QLCKA+KRDVR+I GPLILLQIWAWERF T+APQL HAN+HLLPGRA GS
Sbjct: 127 GGVCLAWLYKQLCKASKRDVRDIDGPLILLQIWAWERFPTIAPQLTHANNHLLPGRALGS 186

Query: 62  RWRDQFCVTRSATHVVSQYRYMFELLQRDQALHHSTRSSCGSSDDPQQALDICNNNERYM 121
             RDQFCVTR ATHVVSQYRYMF+LLQRDQ +    +    +  +   +  + +   R+ 
Sbjct: 187 --RDQFCVTRLATHVVSQYRYMFDLLQRDQIIWEPYKDVIDNLPNFYWSDRVAHLVVRWQ 246

Query: 122 EEIHYM--------YDIPIVPPPVNRGRFRVEEPKLDEVYHNVEEVPPVTQTQSQTGYGS 181
               +M        +D+ +    ++ GR RVEE +LDEVYHNVEEVPP TQTQSQTGYGS
Sbjct: 247 SRRRFMAIGVSIQQFDMDVTQEYIHWGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGS 306

Query: 182 LMMMMMILAFGAGYCDSEVSTGYNDLEFDPSSSYMDM 211
            M MM    FGAGYCDSEV TGY D    P SSYMD+
Sbjct: 307 PMTMMP--TFGAGYCDSEVGTGYYDAGISPLSSYMDV 339

BLAST of PI0004521 vs. NCBI nr
Match: TYK14590.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 247.3 bits (630), Expect = 1.5e-61
Identity = 163/392 (41.58%), Postives = 200/392 (51.02%), Query Frame = 0

Query: 2   GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS 61
           GGAC AWLYRQLCKA+K+ VREI GPLILLQIWAWERF  +APQL H N + L GRA+GS
Sbjct: 428 GGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAPQLLHVNANQLHGRAYGS 487

Query: 62  RWRDQFCVTRSATHVVSQYRYMFELLQRDQ---------------ALH------------ 121
           RWRDQFCVTRSATHVVSQYRYMF+LLQ  Q                LH            
Sbjct: 488 RWRDQFCVTRSATHVVSQYRYMFDLLQPSQFGIQQAVPRDCNTEPLLHNIDLRTADWSDR 547

Query: 122 --------HSTRSSCGS------------------------------------------- 181
                   H+ R    +                                           
Sbjct: 548 VAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNIR 607

Query: 182 ----SDDPQQALDICNNNERYMEEIHYMYDIPIVPPPVNRGRFRVEEP-KLDEVYHNVEE 241
               +DD QQ L+ICN+NE+YME IHYMYD+PIV  PV + R  V+EP +L+EV  + EE
Sbjct: 608 LRNVADDLQQVLNICNDNEQYMENIHYMYDVPIVLAPVQKRRPLVQEPDQLEEVDQHGEE 667

Query: 242 VPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTG----------------------Y 259
           VPP+TQTQ+Q+ +  +  +MM+  FG  Y DS+V                         Y
Sbjct: 668 VPPMTQTQTQSEHSYVCPVMMMPTFGTTYYDSKVGQSSDFERGYYNSEAGQSSTNFGQQY 727

BLAST of PI0004521 vs. NCBI nr
Match: KAA0038951.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 242.3 bits (617), Expect = 4.7e-60
Identity = 148/299 (49.50%), Postives = 170/299 (56.86%), Query Frame = 0

Query: 26  GPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGSRWRDQFCVTRSATHVVSQYRYMFE 85
           G LILLQIWAWERFST+APQL HAN+HLLPGRA GSRW+DQFCVTR ATHVVSQYRYMF+
Sbjct: 11  GLLILLQIWAWERFSTIAPQLTHANNHLLPGRALGSRWKDQFCVTRLATHVVSQYRYMFD 70

Query: 86  LLQRDQALHHSTRSSCGS------------------------------------------ 145
           LLQRDQ +    ++  G+                                          
Sbjct: 71  LLQRDQIIWEPYKNVIGNLPNFCKNGQDIWRTISPLICFHIGVSIQQFDIDVTQEYIHWY 130

Query: 146 ----------------------------SDDPQQALDICNNNERYMEEIHYMYDIPIVPP 205
                                       +DDPQQ L+ICNNN+RYMEEIH MYD+ IVPP
Sbjct: 131 NNITRLYITRPRAAVGHLRSNNARLRDVADDPQQVLNICNNNKRYMEEIHNMYDLSIVPP 190

Query: 206 PVNRGRFRVEEPKLDEVYHNVEEVPPVTQTQSQTGYGSLMMMMMILAFGAGYCDSEVSTG 255
           PV+RGR RVEE +LDEVYHNVEEVPP TQTQSQTGYGS M MM    FGAGY DSEV TG
Sbjct: 191 PVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMP--TFGAGYYDSEVGTG 250

BLAST of PI0004521 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 35/99 (35.35%), Postives = 49/99 (49.49%), Query Frame = 0

Query: 2   GGACFAWLYRQLCKAAKRDVREIFGPLILLQIWAWERFSTMAP-QLRHANDHLLPG---- 61
           G A  A LYR+LC+A+KR V  I GPL+LLQ+WAWER     P +L+      + G    
Sbjct: 222 GSATLALLYRELCRASKRTVSTICGPLVLLQLWAWERLHVGRPGRLKDVGASYMDGIDGP 281

Query: 62  --RAHGSRWRDQFCVTRSATHVVSQYRYMFELLQRDQAL 94
                G RWR       +    +  YR  F+  + +Q +
Sbjct: 282 LPDPLGCRWRASLSHKENPRGGLDFYRDQFDQQKDEQVI 320

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LNG51.9e-0835.35Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana... [more]
Match NameE-valueIdentityDescription
A0A5D3DJV75.9e-8550.81Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5A7UKC78.9e-6541.77Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5A7TDY58.3e-6360.37Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3CT327.1e-6241.58Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
A0A5A7TBF82.3e-6049.50Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... [more]
Match NameE-valueIdentityDescription
TYK23842.11.2e-8450.81serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
KAA0055624.11.8e-6441.77serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
KAA0041168.11.7e-6260.37serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYK14590.11.5e-6141.58mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... [more]
KAA0038951.14.7e-6049.50mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... [more]
Match NameE-valueIdentityDescription
AT1G48120.11.4e-0935.35hydrolases;protein serine/threonine phosphatases [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019557Aminotransferase-like, plant mobile domainPFAMPF10536PMDcoord: 2..94
e-value: 2.9E-12
score: 46.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..258

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0004521.1PI0004521.1mRNA