PI0003117 (gene) Melon (PI 482460) v1

Overview
NamePI0003117
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionNucleolar protein 10
Locationchr04: 20661834 .. 20666451 (-)
RNA-Seq ExpressionPI0003117
SyntenyPI0003117
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATATTATTTATAAGTCTTAAGAATTTCAAGAAACAACCGGTTTGGTCGGCTAACAGGTTTAGAAAGTAAAATTTCGGTTTAACTAAACCGAACCGGTTTATTATATATGCAATTCTAGGTTTTCATTCTTCATTTGAGCAGCCGTCCTTAGTTCCTACCTCCCGTTCATTGGCGCGCCCCGCGGTCGTCCTCCGTAACACGCCCTTCGTCTTGTACCGCCGTTGTTCGTTCTCGGTCTCGCCGCCGTTCGCCTTTTGTTGCACCTCTGTTCATCTCGTGAGTCACTGGCTCCTCACCTTTTTTCTTTTAGTCCATACCTGTCACCCTTCTATCGTATATAAGAATCTCCAACGTATTTTATTGTTTGTTTGTTTGTTTAGCCATTAATCTTATTTGTGTAATCAACAGCAATAAACCCCCCCTTTTTTACAGGTTGAGTGTCTATCAACGATGTATCTTCAGTTTTACATAAACGACAATGGTGATAAAGTCTACACCACAAAGGTTTTTCTTTCTTGTTCCTTTTTTTGCTCTTTGTGTAAAAGTTCATCGACATCATATCGTTTGAGTATTGGGGTTAAACTATTTTTGACTGCGTCCGCTGCGTATCAGATAAGCAGTGTTATATGGAGTCCTTGATTTTTAAGATAATTAAAGATTGCTGAGTTAATGACCATAAGTTTTGGAGACTGGACTAGTTCTATTTGTGCTGACCTTCTTTAGAAAATTAGAGCTATACATCTCTTAATATTGAAGTGGGCTACCGTTGTTAAGTGCGAGTAATTTGTGTAGTTGCAATAATTTTATGTACCAATTAAACGATTGATTAAATCTATAGCAAACCTTTGCTTAGAATGTCTCAATTTTACAGAAAGTTTCTGTTAAGGCTTTGAGCTTTGTTCCAATAACTTCCAATCCTCCCTTCTTTACTTTACCATATCACGATAGTAGTTTAGAATTCCCTTCGTCCCTTCCTTCACCATGTAGGAGGAGTTTTAGATTTTAGGCTTTTGATGCCATTCTTTCTCTACTAATTTGATTGGTAAGTTTCACGTTCACCAAGGATCATCTTTCATTATCACGTGCCATTTGCTTGGGAAAACTGTAGCAACCCGTCAATTCGAATGTTTTATTGAATGTCTTGGAAGTGATTAAACAAAACTAAGGTCAAGGGTTCAATCTATTATGGCCACCTACCTAGGAATTAATTTCCTACGAGTTTCTTTGACACCCAAATGTTGTAGGGTCAGGTGGGTTGTCACGTGAGCTATGTCGTGGTGTGCGTAAGTTGACCTGAAAACACGGGGATATAAAAAAAAAACAAAACTGAAAGCCAAAGGTAAATGATTATTACTTAATCAAATACCAAGGCTTAAAATCCAAAGCCAAGTGCATCACCAAAATGTAAAGGACTAGGCAGTTGTATGAATTAACCCAAATATTAAGCACAGAAGCTTAATCTAAAGAAAAACTACTTGAATGAAAACTAAAATCATATTAAAAATCTTCTTGAATCCGCCAAGAAAACACCAATCCATTAGTCACTGCGAGAACTATTGCTTGCACTTCCATTTGATAACATTTTAAAAACAAAGATGAGTACAAAAATACTTAATAAGGAATTTCCATATCAAGTTTATTACTCATTTTCTCCAAAACAAAACATAACAATTCATTTAAGTTTATTGTTCATGTATTCTTTCATTTCTTCTGAAAGTGGTTGTTTTCATTAAATAAAACAATTTATTGAAGTTCAATCACCAAACCCTTGAATTCTAACAAAGAGAAACAAGCTCGCAATCATTCAACACTTTCAGTCTAAAACCCTTAAAACCTTCAGAATTATCCTAAATTATGGACAGATGAAACGGAATAATTTATTCATTTTTAAACAAAATTATCAGGACTTTAGCACAAAAGAAAAATAAGATTTTCCACTTTTCACACAAAATCAGATCTGTAAAGTGTGATAAAACTGCTGTAAAAACATTAAAAAACATACAACTTTTGTGTAGAAATCAGAACTATATGTTACTCCACATAGAAGCAATCAATTGATAAATGTCCTGTGCAAAATAATTCCAAAAACGCTCAAAACACTCCCTAATTTTAAGAAAACAATGCTGGAAATTTCTGGAATTTCCATTATCAACCTTGAATTTTAAAATAAAAACCTAATTGAAAATTTTGATACTATAAACTTAAGACAATACAAGAAACCAAAACTTTGTTTAGGGCAAAATATTTTTCCATGCCTTTCAAAGAATCCATCAAGAAAAACGAAAATGGGAAAAATCAATGCCCTAAAACCCTCTAAAACTTCAGTAATCAAGAAAAGAAGAAAACACCAAGAAATGGAAAACTAGATCCTTGCAATACAAAACACCAAAAACTTTGTTTAGGGAAAAATATTTTTCCATGCCTTTCACAGAATCCATCAAGAAAAATGAAAACGGGAAAAATCAATGCCCTAAAACCCTCTAAAACTTCAGTAGTCAAGAAAAGAAGAAAACACCAAGAATGGATGACTAGATCCTTGCAATTTATAACTTGGTCTGTAACCTAAAACTTTCACTAGACGGTTAGTCTTATTACGTAAAACTAGATCCTTGCCGTTGATAACTTGGACAGGAACCTCCTCATAATTCAAATTGTCCTTCACTTGCAATGGTGTATGGCTTAACTCGGAAGACATTTGCAATATACTTCCGAAGTATGGAGGTACGAAAAGTATTATGGATTCAATCTAAGACAGGCAGTAAGGCTAAGCGATATGCCAATATACCCATATTTTTCCAAATTCTCAAAAGTTCCAAAAAGTCTTAGGCTGAGCTTCCCTTTCTTCCCAAACCTCAAGATTCCTTTCAACGATAAGACTATAAAAAATACCATATCTTCAACTTTTAAAATTTAATTATTTTCTTCTGATTGCTGACTTTGAGCTGTCTTCCTTCTCTGCTTAACTGAGTCAAGGCCTCACTAGATTTTCGCACTGACTCAGGTCCCAAAATCGAGCTCTCTCCCACTTCAGTCTAATTGGTTGGCGACCTACCCTTGTGCCCATAGGGTGCAATGAAAGGTGCCATTCCGATAGTTGCTTGATAGATATTATTATAACTTAACTCTATGATGGAAAATGTTTCTCCCAGCTGCCTCGGAAGTCCAAAGCTTTAACTTGAAGCATATCCTACACTATTTGAATTGTCTTTTCTGTCTGACCCATCTGCGGGTGGAACAAGATACTGAAATTAAGTCTCGTGTCTAGAGCCTTTTCCATACTTTTGTAAAGTTTGGAAGTGAACTTTGGATCTTGGTCTGACACTATAGTGTATCAATCTTGTTCTGACACTTTGGATCTTGTTTAGACCATTGTGCCTATTAAATACAACTGAAATAGGTCCTGCACATACGTTTGGACTTGCTTGATAAACTGAGTATCAAAAGAAAAAAACAAAAAAGACAAACTAGCTTGATAAGTCATTGCTAATTACCCTTAACTGCTTGTACTTTTTTGTGCAGACAATTTTATGCTAACTTATCTGTTTCGTATTTTTCTTTATCTTGTACAGAAGGAATCTCCTCTAGGTTTGGCCACACAATCTGCTCATCCAGGTAATTTTTTTTGCATTATTTGGCTAGTTGCGTGCCACTTCCTTTCACTGACTTGCATAATTAGCAATATCAAGGATCTTGGTAGGGAGAAAGACCATGCTCTAATGTCTTGTTTTTTTCTTATAACAAGGGAATTGGTTGAAACATTATATATTAGAAGCGGTTAAAGAAAAATAGACACCGAGTTACGTGGAAACCTGAGTACCGGGAGAATAACCACGATCTACCTTTCTTATTATTTTCTCATATCAACATAAGATACAAAGAGGAAAATAAATGGACAACAAGCTTGTGATAAAAAAGGAAAGACAATTAGGGTAAATCTTTCCTTGGGCCAAGCCCACTAATTCTAACATTATACATGGTCTATTTCAGTTGTAATTTTCACTGTGGCTGAGGCTATTGTGAAGATTGGAATTATACATTTGTGAGAACGGAAATGCACTGATAGGCATTTCCTATCTCTTTAGGAAATATCATTGCTTACCTATCTCTTCAGAGATACCATCGCTTGTTCTCTATATTGAATTAATTCAGATATTGCCTGATAGGCTGCCCCCTTCAATGCGGTCATGGTTTTAGCAGTTTTGGGGATTTCTGTTAACCTGTTTTACATTTTCTGGCTGCAGCTCGTTTCTCCCCCGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGAACTCAATGCACGCTCAAATCACAACTCTATGGCAGTTTTCTCAAGTGTTTTTTTACCAGACCCCCATCAATAGTTAGATCGTGACTTGGTTAAACTTTGATAGATAGTTTCCTTTTTCTTTCTATGGCTTGTAATTGAGCTGTAAAGCACAATTCACTGTTGAACCTTTCTTTAAGCTTGTCAATGGCTTTATGTTTGTATTGAACTTTATTTTACTGAAAGCAAACTTATCTACTTTGAAGATCTGGTTTTAATGCAAGATAATGGGCCTTTTTTCA

mRNA sequence

AATATTATTTATAAGTCTTAAGAATTTCAAGAAACAACCGGTTTGGTCGGCTAACAGGTTTAGAAAGTAAAATTTCGGTTTAACTAAACCGAACCGGTTTATTATATATGCAATTCTAGGTTTTCATTCTTCATTTGAGCAGCCGTCCTTAGTTCCTACCTCCCGTTCATTGGCGCGCCCCGCGGTCGTCCTCCGTAACACGCCCTTCGTCTTGTACCGCCGTTGTTCGTTCTCGGTCTCGCCGCCGTTCGCCTTTTGTTGCACCTCTGTTCATCTCGTTGAGTGTCTATCAACGATGTATCTTCAGTTTTACATAAACGACAATGGTGATAAAGTCTACACCACAAAGAAGGAATCTCCTCTAGGTTTGGCCACACAATCTGCTCATCCAGCTCGTTTCTCCCCCGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGAACTCAATGCACGCTCAAATCACAACTCTATGGCAGTTTTCTCAAGTGTTTTTTTACCAGACCCCCATCAATAGTTAGATCGTGACTTGGTTAAACTTTGATAGATAGTTTCCTTTTTCTTTCTATGGCTTGTAATTGAGCTGTAAAGCACAATTCACTGTTGAACCTTTCTTTAAGCTTGTCAATGGCTTTATGTTTGTATTGAACTTTATTTTACTGAAAGCAAACTTATCTACTTTGAAGATCTGGTTTTAATGCAAGATAATGGGCCTTTTTTCA

Coding sequence (CDS)

ATGTATCTTCAGTTTTACATAAACGACAATGGTGATAAAGTCTACACCACAAAGAAGGAATCTCCTCTAGGTTTGGCCACACAATCTGCTCATCCAGCTCGTTTCTCCCCCGATGACAAATATTCGAGGCAAAGAGTTCTTCTTAAGAAGCGATTTGGCTTGCTTCCTACACAGCAGCCACCTCCAAAGTACTGA

Protein sequence

MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY
Homology
[Close]
BLAST of PI0003117 vs. ExPASy Swiss-Prot
Match: Q93XX8 (H/ACA ribonucleoprotein complex subunit 3-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g20490 PE=3 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 2.8e-25
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQ YIN+ G+KVYTTKKESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  
Sbjct: 1  MYLQCYINEKGEKVYTTKKESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQNA 60

Query: 61 PPKY 65
          P +Y
Sbjct: 61 PLQY 64

[Close]
BLAST of PI0003117 vs. ExPASy Swiss-Prot
Match: Q6DRH5 (H/ACA ribonucleoprotein complex subunit 3 OS=Danio rerio OX=7955 GN=nop10 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.0e-19
Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          M+LQFY+N+NG++VYT KK  P G  T SAHPARFSPDDK+SR RV +KKRFGLL TQQP
Sbjct: 1  MFLQFYLNENGERVYTLKKVDPSGQPTSSAHPARFSPDDKFSRHRVTIKKRFGLLLTQQP 60

Query: 61 PP 63
           P
Sbjct: 61 RP 62

[Close]
BLAST of PI0003117 vs. ExPASy Swiss-Prot
Match: Q9NPE3 (H/ACA ribonucleoprotein complex subunit 3 OS=Homo sapiens OX=9606 GN=NOP10 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.5e-18
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          M+LQ+Y+N+ GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQQP
Sbjct: 1  MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60

Query: 61 PP 63
           P
Sbjct: 61 RP 62

[Close]
BLAST of PI0003117 vs. ExPASy Swiss-Prot
Match: Q9CQS2 (H/ACA ribonucleoprotein complex subunit 3 OS=Mus musculus OX=10090 GN=Nop10 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.5e-18
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          M+LQ+Y+N+ GD+VYT KK  P+G  T SAHPARFSPDDKYSR R+ +KKRF +L TQQP
Sbjct: 1  MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60

Query: 61 PP 63
           P
Sbjct: 61 RP 62

[Close]
BLAST of PI0003117 vs. ExPASy Swiss-Prot
Match: Q9V5P6 (H/ACA ribonucleoprotein complex subunit 3 OS=Drosophila melanogaster OX=7227 GN=CG7637 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.3e-18
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYL + IN+NGD+VYT KK +  G  T SAHPARFSP+DKYSRQR+ +KKRFGLL TQ+P
Sbjct: 1  MYLMYTINENGDRVYTLKKRTEDGRPTLSAHPARFSPEDKYSRQRLTIKKRFGLLLTQKP 60

Query: 61 PPKY 65
           P Y
Sbjct: 61 EPIY 64

[Close]
BLAST of PI0003117 vs. ExPASy TrEMBL
Match: A0A1S3BHD2 (Nucleolar protein 10 OS=Cucumis melo OX=3656 GN=LOC103489864 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.3e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of PI0003117 vs. ExPASy TrEMBL
Match: A0A2P2IS35 (Nucleolar protein 10 OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.3e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of PI0003117 vs. ExPASy TrEMBL
Match: A0A6P4CV10 (Nucleolar protein 10 OS=Arachis duranensis OX=130453 GN=LOC107481354 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 9.7e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKE+PLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKETPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of PI0003117 vs. ExPASy TrEMBL
Match: A0A445DPP9 (Nucleolar protein 10 OS=Arachis hypogaea OX=3818 GN=Ahy_A03g011132 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 9.7e-29
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKE+PLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKETPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of PI0003117 vs. ExPASy TrEMBL
Match: A0A7J7CYK9 (Nucleolar protein 10 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G00152 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYIN+NGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of PI0003117 vs. NCBI nr
Match: XP_008447412.1 (PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis melo] >XP_016900440.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis melo])

HSP 1 Score: 136.3 bits (342), Expect = 9.0e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of PI0003117 vs. NCBI nr
Match: XP_015957125.1 (H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis duranensis] >XP_015968038.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis duranensis] >XP_016190259.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis ipaensis] >XP_016207587.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis ipaensis] >XP_025603224.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >XP_025638752.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >XP_025663306.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >XP_025690500.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >XP_038888268.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Benincasa hispida] >QHO59290.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis hypogaea] >RYR65157.1 hypothetical protein Ahy_A03g011132 [Arachis hypogaea])

HSP 1 Score: 135.2 bits (339), Expect = 2.0e-28
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKE+PLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKETPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of PI0003117 vs. NCBI nr
Match: XP_011651438.1 (H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus] >XP_021665893.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Hevea brasiliensis] >XP_027352960.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Abrus precatorius] >XP_031738537.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus] >XP_038718649.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Tripterygium wilfordii] >PIN05065.1 H/ACA snoRNP complex, subunit NOP10 [Handroanthus impetiginosus] >KAE8650652.1 hypothetical protein Csa_011605 [Cucumis sativus] >KAF5738956.1 H/ACA ribonucleoprotein complex subunit 3-like protein [Tripterygium wilfordii])

HSP 1 Score: 134.8 bits (338), Expect = 2.6e-28
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYIN+NGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP
Sbjct: 1  MYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of PI0003117 vs. NCBI nr
Match: XP_027917459.1 (H/ACA ribonucleoprotein complex subunit 3-like protein [Vigna unguiculata])

HSP 1 Score: 134.4 bits (337), Expect = 3.4e-28
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRV LKKRFGLLPTQQP
Sbjct: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVTLKKRFGLLPTQQP 60

Query: 61 PPKY 65
          PPKY
Sbjct: 61 PPKY 64

[Close]
BLAST of PI0003117 vs. NCBI nr
Match: QCD97752.1 (H/ACA ribonucleoprotein complex subunit 3 [Vigna unguiculata])

HSP 1 Score: 134.4 bits (337), Expect = 3.4e-28
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0 

Query: 1   MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
           MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRV LKKRFGLLPTQQP
Sbjct: 53  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVTLKKRFGLLPTQQP 112

Query: 61  PPKY 65
           PPKY
Sbjct: 113 PPKY 116

[Close]
BLAST of PI0003117 vs. TAIR 10
Match: AT2G20490.1 (nucleolar RNA-binding Nop10p family protein )

HSP 1 Score: 115.2 bits (287), Expect = 2.0e-26
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQ YIN+ G+KVYTTKKESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  
Sbjct: 1  MYLQCYINEKGEKVYTTKKESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQNA 60

Query: 61 PPKY 65
          P +Y
Sbjct: 61 PLQY 64

[Close]
BLAST of PI0003117 vs. TAIR 10
Match: AT2G20490.2 (nucleolar RNA-binding Nop10p family protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.9e-24
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 1  MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQP 60
          MYLQ YIN+ G+KVYTT KESPLGLAT+SAHPARFSPDDKYS+QRVLLKKRFGLLPTQ  
Sbjct: 1  MYLQCYINEKGEKVYTT-KESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQNA 60

Query: 61 PPKY 65
          P +Y
Sbjct: 61 PLQY 63

The following BLAST results are available for this feature:
BLAST of PI0003117 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93XX82.8e-2584.38H/ACA ribonucleoprotein complex subunit 3-like protein OS=Arabidopsis thaliana O... [more]
Q6DRH51.0e-1970.97H/ACA ribonucleoprotein complex subunit 3 OS=Danio rerio OX=7955 GN=nop10 PE=3 S... [more]
Q9NPE32.5e-1866.13H/ACA ribonucleoprotein complex subunit 3 OS=Homo sapiens OX=9606 GN=NOP10 PE=1 ... [more]
Q9CQS22.5e-1866.13H/ACA ribonucleoprotein complex subunit 3 OS=Mus musculus OX=10090 GN=Nop10 PE=3... [more]
Q9V5P63.3e-1867.19H/ACA ribonucleoprotein complex subunit 3 OS=Drosophila melanogaster OX=7227 GN=... [more]
BLAST of PI0003117 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BHD24.3e-29100.00Nucleolar protein 10 OS=Cucumis melo OX=3656 GN=LOC103489864 PE=3 SV=1[more]
A0A2P2IS354.3e-29100.00Nucleolar protein 10 OS=Rhizophora mucronata OX=61149 PE=3 SV=1[more]
A0A6P4CV109.7e-2998.44Nucleolar protein 10 OS=Arachis duranensis OX=130453 GN=LOC107481354 PE=3 SV=1[more]
A0A445DPP99.7e-2998.44Nucleolar protein 10 OS=Arachis hypogaea OX=3818 GN=Ahy_A03g011132 PE=3 SV=1[more]
A0A7J7CYK91.3e-2898.44Nucleolar protein 10 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G00152 PE=... [more]
BLAST of PI0003117 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008447412.19.0e-29100.00PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis melo]... [more]
XP_015957125.12.0e-2898.44H/ACA ribonucleoprotein complex subunit 3-like protein [Arachis duranensis] >XP_... [more]
XP_011651438.12.6e-2898.44H/ACA ribonucleoprotein complex subunit 3-like protein [Cucumis sativus] >XP_021... [more]
XP_027917459.13.4e-2898.44H/ACA ribonucleoprotein complex subunit 3-like protein [Vigna unguiculata][more]
QCD97752.13.4e-2898.44H/ACA ribonucleoprotein complex subunit 3 [Vigna unguiculata][more]
BLAST of PI0003117 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G20490.12.0e-2684.38nucleolar RNA-binding Nop10p family protein [more]
AT2G20490.21.9e-2482.81nucleolar RNA-binding Nop10p family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.28.40H/ACA ribonucleoprotein complex, subunit Nop10coord: 10..54
e-value: 1.8E-14
score: 55.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..40
NoneNo IPR availablePANTHERPTHR13305:SF5NUCLEOLAR RNA-BINDING NOP10P-LIKE PROTEINcoord: 1..64
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PFAMPF04135Nop10pcoord: 3..52
e-value: 3.8E-19
score: 68.5
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PANTHERPTHR13305RIBOSOME BIOGENESIS PROTEIN NOP10coord: 1..64
IPR036756H/ACA ribonucleoprotein complex, subunit Nop10 superfamilySUPERFAMILY144210Nop10-like SnoRNPcoord: 3..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0003117.1PI0003117.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010197 polar nucleus fusion
biological_process GO:0031118 rRNA pseudouridine synthesis
biological_process GO:0031120 snRNA pseudouridine synthesis
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0031429 box H/ACA snoRNP complex
cellular_component GO:0090661 box H/ACA telomerase RNP complex
cellular_component GO:0015030 Cajal body
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0034513 box H/ACA snoRNA binding
molecular_function GO:0070034 telomerase RNA binding
molecular_function GO:0030515 snoRNA binding