PI0003036 (gene) Melon (PI 482460) v1

Overview


Name	PI0003036
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	transcription factor bHLH87-like
Location	chr04: 12852388 .. 12854627 (+)
RNA-Seq Expression	PI0003036
Synteny	PI0003036

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAGGCTTCTCCCTTTGTCTTCTCTTCAAACTCCAAAACACTTCCACACAAAGCTTCCATAGCCTACAACCAATGGATGATTTGCTTTGGAATAGTTCATGGAGTAACGAAGAAAGCTTATTCGTCTCCGATGATCCGAGTCGATTTTCGAGTCCACCGTTACAAGAGCTTCAAACAGTGGCAAGAATATTGGGTTGCCGGAGATCGATACTCTGACCCCGGAGATAAGGGTAGAGAAATTGGCTAAGGATTCCAAGGTTTTATTTGAACGTGAAAAGTCGTGGCCCATGGAAGTTAGCACCGGTGGAGTTTTGTTCGAAGTGCTTGAAAATGACAAAGGTTTGAATTTGTATAAACTTTGTTCACATTTGATATTATTGTTTTTTCTTTCTTTCTTTTTTCTTTTCTTTTATTTTTTCCTTCTTTCCTTTTTCTGGTTGGGACATCTTGCATTGATTAAGAAGAATATACTTCTCACACTTGATCAAATATATCTTTTCCAAAAAAAAAAAAAAGATTGGGTTGCTTTAGCTCCTCCTATTTTTTTTTTTTCAAACCCCTAATAAAATTTTGCCCAATTTGTTTTATAAAAAAGTTGAATTGTCTTTTATAGATTACATAGGATGCATCTAAATATTGTCTATTTTTTCATACTTTTCTAATAACTACATTAGAGCTTTTTAGGTATATCCAAAGTATTACATGAATGAGGTTTTCGTTAAATTATATTTGATTTAAGTGGTTGGAGATTTTCTTTTCATTTATTTAGTATTGATTTTCATGCATAATTTTTTAAGTTTATTTATTTATTTTTTTCTTTAATAAAAAACGTTTTAACGTCAAATAATATAATTGTTATCCAAATGAGGTAAACTAAAAAAATTTGTTAATGTAAAAAAAAAAATCAAAATCAAATTTCTCGCTCTATAGTCTTCTATTCATCTTAAAATACGAGAATTCATCTACGGTTTGAACATAACAATCATGAAAAGTTTTTGAAAGGTGGTAGATTTTGGATTTATATGTCCACTCTTTTTATATTTTATTATCATTTAAAATAACTAAACATATCATACAATAAACATTGAATTATGAGAATATATATAACATACACTCTTTTATGAGTTCAACGATGTGTTATTATATTTGAAAAGTTTGACATCTATCGAATTTAATGATATCCTACTTTATCCACATAATTATGTGTTTGACACATTCTTATTTTAATTTTATAATTATTTTAATTATTCTTTTTTTTGCTACTTAAAATATTGTATATATTATCTTAAATATTCACCATCTTTTTAAATATATATATACGCAATATCTTACTAAACTTTTACGAAATTTATGTTATCCACTTCGAAAATATGAGATTCAATTCATTTACTTCATATATTATAAAAATAAAGAATGGAGGGTTGGAAATTGCACCATGCAATATATTAGATTTATATTACCATGCAATAACCTACAAGAGATTTTTGGTTATGTAGGAATTGCACCAAAAGGTGGATTTTTGGATATTTTTGAGAATCAAAAACCAAACCAACAAAACCCCATCATAGAAAAACAAACAAGTTCAACCAACTCTACAACTCTATCGCCATCGCCATCCCAGTCTCCATCATCTTCGAACATCGATGAAATCGAGCAAGCTGTTGATCGAGATCAGGTTGTGTCACAAATGAAGGAATGGATATACTATGCAGCGGTGTTTAGGCCAGTAAACTTGGGATTGGAGACGGTGGAGAAGAAGAGGAGGAGGAACGTCAAAATGTCGAAAGAGCCTCAGACGGTAGCGGCGAGAAAACGAAGGGAGAAAATAAGTGAAAAAATTAGGGTTTTGCAGAGGTTAGTTCCTGGTGGCAGCAAAATGGACATTGCCTCCATGCTTGATGAGGCAGCAAGCTACCTCAAGTTCCTTAGGGCACAAATCAAAGCACTAGAAGGCTTAACCTACAAATTTGGCTCTATAGATTGTCTCTCAACTTGCACCTCTTTCAACCCTACCTTTCCCACAAATCCTTAATTTCTCTCTTTAAAACCTTTATGTACTATCTTATCGATAAAATATTGAGTTTGTCAATTGTTAGAATAATTAGACATTCCTAAGTACATATATTATCATACTTGTATATTTTTTATGCTTTACTTTTCGACATTAATAATAAAGTTTACCATCAAAGAGGTTGTTATA

mRNA sequence

AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAGGCTTCTCCCTTTGTCTTCTCTTCAAACTCCAAAACACTTCCACACAAAGCTTCCATAGCCTACAACCAATGGATGATTTGCTTTGGAATAGTTCATGGAGTAACGAAGAAAGCTTATTCGTCTCCGATGATCCGAGTCGATTTTCGAGTCCACCGTTACAAGAGCTTCAAACAGTGGCAAGAATATTGGGTTGCCGGAGATCGATACTCTGACCCCGGAGATAAGGGTAGAGAAATTGGCTAAGGATTCCAAGGTTTTATTTGAACGTGAAAAGTCGTGGCCCATGGAAGTTAGCACCGGTGGAGTTTTGTTCGAAGTGCTTGAAAATGACAAAGGAATTGCACCAAAAGGTGGATTTTTGGATATTTTTGAGAATCAAAAACCAAACCAACAAAACCCCATCATAGAAAAACAAACAAGTTCAACCAACTCTACAACTCTATCGCCATCGCCATCCCAGTCTCCATCATCTTCGAACATCGATGAAATCGAGCAAGCTGTTGATCGAGATCAGGTTGTGTCACAAATGAAGGAATGGATATACTATGCAGCGGTGTTTAGGCCAGTAAACTTGGGATTGGAGACGGTGGAGAAGAAGAGGAGGAGGAACGTCAAAATGTCGAAAGAGCCTCAGACGGTAGCGGCGAGAAAACGAAGGGAGAAAATAAGTGAAAAAATTAGGGTTTTGCAGAGGTTAGTTCCTGGTGGCAGCAAAATGGACATTGCCTCCATGCTTGATGAGGCAGCAAGCTACCTCAAGTTCCTTAGGGCACAAATCAAAGCACTAGAAGGCTTAACCTACAAATTTGGCTCTATAGATTGTCTCTCAACTTGCACCTCTTTCAACCCTACCTTTCCCACAAATCCTTAATTTCTCTCTTTAAAACCTTTATGTACTATCTTATCGATAAAATATTGAGTTTGTCAATTGTTAGAATAATTAGACATTCCTAAGTACATATATTATCATACTTGTATATTTTTTATGCTTTACTTTTCGACATTAATAATAAAGTTTACCATCAAAGAGGTTGTTATA

Coding sequence (CDS)

ATGGAAGTTAGCACCGGTGGAGTTTTGTTCGAAGTGCTTGAAAATGACAAAGGAATTGCACCAAAAGGTGGATTTTTGGATATTTTTGAGAATCAAAAACCAAACCAACAAAACCCCATCATAGAAAAACAAACAAGTTCAACCAACTCTACAACTCTATCGCCATCGCCATCCCAGTCTCCATCATCTTCGAACATCGATGAAATCGAGCAAGCTGTTGATCGAGATCAGGTTGTGTCACAAATGAAGGAATGGATATACTATGCAGCGGTGTTTAGGCCAGTAAACTTGGGATTGGAGACGGTGGAGAAGAAGAGGAGGAGGAACGTCAAAATGTCGAAAGAGCCTCAGACGGTAGCGGCGAGAAAACGAAGGGAGAAAATAAGTGAAAAAATTAGGGTTTTGCAGAGGTTAGTTCCTGGTGGCAGCAAAATGGACATTGCCTCCATGCTTGATGAGGCAGCAAGCTACCTCAAGTTCCTTAGGGCACAAATCAAAGCACTAGAAGGCTTAACCTACAAATTTGGCTCTATAGATTGTCTCTCAACTTGCACCTCTTTCAACCCTACCTTTCCCACAAATCCTTAA

Protein sequence

MEVSTGGVLFEVLENDKGIAPKGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLSPSPSQSPSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFGSIDCLSTCTSFNPTFPTNP

Homology

[Close]

BLAST of PI0003036 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-33
Identity = 91/175 (52.00%), Postives = 117/175 (66.86%), Query Frame = 0


Query: 22  KGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLSPSPSQSPSSSNIDEIEQAVDRDQVVSQ 81
           KGGF  I++  +   + P  EK+   +++ +   S   S      D +E      + ++Q
Sbjct: 194 KGGFKLIYDENQSKSKKPRTEKERGGSSNISFQHSTCLS------DNVEPDA---EAIAQ 253

Query: 82  MKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVAARKRREKISEKIRVLQRLVPG 141
           MKE IY AA FRPVN GLE VEK +R+NVK+S +PQTVAAR+RRE+ISEKIRVLQ LVPG
Sbjct: 254 MKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPG 313

Query: 142 GSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFG--SIDCLSTCTS---FNPTF 192
           G+KMD ASMLDEAA+YLKFLRAQ+KALE L  K    ++   S  TS   F+P+F
Sbjct: 314 GTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPLFHPSF 359

[Close]

BLAST of PI0003036 vs. ExPASy Swiss-Prot
Match: A0A0P0WQ90 (Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=LF PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.5e-24
Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = 0


Query: 77  QVVSQMKEWIYYAAVFRPVNLG------------LETVEKKRRRNVKMSKEPQTVAARKR 136
           + ++Q+KE IY AA  RPV LG                ++ RR+NV++S +PQTVAAR R
Sbjct: 256 EAIAQVKEMIYRAAAMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVAARLR 315

Query: 137 REKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGL 172
           RE++SE++RVLQRLVPGGSKMD A+MLDEAASYLKFL++Q++ALE L
Sbjct: 316 RERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALETL 362

[Close]

BLAST of PI0003036 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.0e-22
Identity = 58/116 (50.00%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 54  SPSPSQSPSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMS 113
           +PSP     SS++ E       +  ++ M+E I+  AV +P+++  E+V+  +R+NV++S
Sbjct: 72  APSP-----SSSLPEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRIS 131

Query: 114 KEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALE 170
           K+PQ+VAAR RRE+ISE+IR+LQRLVPGG+KMD ASMLDEA  Y+KFL+ Q+++LE
Sbjct: 132 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182

[Close]

BLAST of PI0003036 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 105.9 bits (263), Expect = 5.2e-22
Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 61  PSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVA 120
           P    +  +++  + D+ +  MKE  Y  AV +PV++   TV K  RRNV++S +PQTV 
Sbjct: 67  PPPETLIHLDEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVV 126

Query: 121 ARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALE 170
           AR+RRE+ISEKIR+L+R+VPGG+KMD ASMLDEA  Y KFL+ Q++ L+
Sbjct: 127 ARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of PI0003036 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-21
Identity = 58/122 (47.54%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 48  TNSTTLSPSPSQSPSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRR 107
           TN +++SP+ + S    +        +    ++ M+E I+  AV +P+++  E V+  +R
Sbjct: 64  TNPSSISPNTAYSSVFLDKRNNSNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKR 123

Query: 108 RNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKA 167
           RNV++SK+PQ+VAAR RRE+ISE+IR+LQRLVPGG+KMD ASMLDEA  Y+KFL+ Q+++
Sbjct: 124 RNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQS 183

Query: 168 LE 170
           LE
Sbjct: 184 LE 185

[Close]

BLAST of PI0003036 vs. ExPASy TrEMBL
Match: A0A0A0LDH7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850530 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.8e-89
Identity = 181/195 (92.82%), Postives = 184/195 (94.36%), Query Frame = 0


Query: 1   MEVSTGGVLFEVLENDKGIAPKGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLSPSPSQS 60
           MEV+TGGVLFEVLENDKGIA KGGFLDI ENQKPNQQN IIE Q SSTNSTTLSPSP  S
Sbjct: 79  MEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSP--S 138

Query: 61  PSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVA 120
           PSSSNI+EIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRR+NVKMSKEPQTVA
Sbjct: 139 PSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVA 198

Query: 121 ARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFGSIDC 180
           ARKRREKISEKIRVLQRLVPGGSKMDI SMLDEAASYLKFLRAQIKALEGLTYKFGSIDC
Sbjct: 199 ARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQIKALEGLTYKFGSIDC 258

Query: 181 LSTCTSFNPTFPTNP 196
           LSTCT  N TFPTNP
Sbjct: 259 LSTCTPLNSTFPTNP 271

[Close]

BLAST of PI0003036 vs. ExPASy TrEMBL
Match: A0A5D3BVP3 (Transcription factor bHLH87-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001900 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.9e-84
Identity = 171/195 (87.69%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MEVSTGGVLFEVLENDKGIAPKGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLSPSPSQS 60
           +EV+TGGVLFEVLEND+GIAPKGGFLDIFENQK +QQNPIIEK  SSTNSTT  PSPS S
Sbjct: 78  VEVTTGGVLFEVLENDQGIAPKGGFLDIFENQKLSQQNPIIEKLPSSTNSTT--PSPSPS 137

Query: 61  PSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVA 120
            SSS I+EIEQ VD+D+ VSQMK+WIYYAAVF+PVNLGLETVEKKRRRNVK+SKEPQTVA
Sbjct: 138 SSSSYIEEIEQVVDQDRFVSQMKQWIYYAAVFKPVNLGLETVEKKRRRNVKVSKEPQTVA 197

Query: 121 ARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFGSIDC 180
           ARKRREKISEKIRVL+RLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGL YKFGS DC
Sbjct: 198 ARKRREKISEKIRVLRRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLNYKFGSTDC 257

Query: 181 LSTCTSFNPTFPTNP 196
           LSTCT FNPTFPTNP
Sbjct: 258 LSTCTPFNPTFPTNP 270

[Close]

BLAST of PI0003036 vs. ExPASy TrEMBL
Match: A0A1S3BIP2 (transcription factor bHLH87-like OS=Cucumis melo OX=3656 GN=LOC103489996 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.9e-84
Identity = 171/195 (87.69%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MEVSTGGVLFEVLENDKGIAPKGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLSPSPSQS 60
           +EV+TGGVLFEVLEND+GIAPKGGFLDIFENQK +QQNPIIEK  SSTNSTT  PSPS S
Sbjct: 78  VEVTTGGVLFEVLENDQGIAPKGGFLDIFENQKLSQQNPIIEKLPSSTNSTT--PSPSPS 137

Query: 61  PSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVA 120
            SSS I+EIEQ VD+D+ VSQMK+WIYYAAVF+PVNLGLETVEKKRRRNVK+SKEPQTVA
Sbjct: 138 SSSSYIEEIEQVVDQDRFVSQMKQWIYYAAVFKPVNLGLETVEKKRRRNVKVSKEPQTVA 197

Query: 121 ARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFGSIDC 180
           ARKRREKISEKIRVL+RLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGL YKFGS DC
Sbjct: 198 ARKRREKISEKIRVLRRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLNYKFGSTDC 257

Query: 181 LSTCTSFNPTFPTNP 196
           LSTCT FNPTFPTNP
Sbjct: 258 LSTCTPFNPTFPTNP 270

[Close]

BLAST of PI0003036 vs. ExPASy TrEMBL
Match: A0A6J1D4K8 (transcription factor bHLH87-like OS=Momordica charantia OX=3673 GN=LOC111016961 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.6e-58
Identity = 136/198 (68.69%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 4   STGGVLFEVLENDKG-IAPKGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLS--PSPSQS 63
           S+GG+L E LENDKG  AP+ G  DIFEN KP QQNPI EKQ SS N        + S S
Sbjct: 87  SSGGLLLEELENDKGRTAPESGSWDIFENPKPKQQNPISEKQPSSANYNGFQQPSNSSPS 146

Query: 64  PSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVA 123
           PSSSN +++E A  R+  +++MK  +Y+AA FRPVNLGLETVEKKRRRNVK SKEPQTVA
Sbjct: 147 PSSSNNNDVEPA-GREAGMARMKAMMYHAAAFRPVNLGLETVEKKRRRNVKTSKEPQTVA 206

Query: 124 ARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFGSIDC 183
           ARKRREKISEKIRVLQRLVPGGSKMD ASMLDEAASYLKFLR Q+KA+E L+YK GS+DC
Sbjct: 207 ARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAASYLKFLREQVKAMEDLSYKLGSLDC 266

Query: 184 LSTCTSFN----PTFPTN 195
           LS CTSF+      FPT+
Sbjct: 267 LSNCTSFSFNSTSAFPTS 283

[Close]

BLAST of PI0003036 vs. ExPASy TrEMBL
Match: A0A6J1GXV2 (transcription factor bHLH87-like OS=Cucurbita moschata OX=3662 GN=LOC111457836 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 4.7e-58
Identity = 133/181 (73.48%), Postives = 144/181 (79.56%), Query Frame = 0


Query: 13  LENDKGIAPKGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLSPSPSQSPSSSNIDEIEQA 72
           +E+DKGIAPKGG LDIFENQKP QQ           NSTT         SSSN D++ + 
Sbjct: 59  MEDDKGIAPKGGVLDIFENQKPKQQ-----------NSTT---------SSSNNDQV-KP 118

Query: 73  VDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVAARKRREKISEKI 132
            +RD+ +SQMKE +YYAAVFRPV+ G ETVEKKRRRNVK SKEPQTVAARKRREKISEKI
Sbjct: 119 FNRDRAMSQMKELVYYAAVFRPVSSGSETVEKKRRRNVKTSKEPQTVAARKRREKISEKI 178

Query: 133 RVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFGSIDCLSTCTSFNPTFP 192
           R LQRLVPGGSKMD ASMLDEAASYLKFLRAQIKALEG +YK GSIDCLST TSFNP FP
Sbjct: 179 RALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGFSYKLGSIDCLSTSTSFNPPFP 218

Query: 193 T 194
           T
Sbjct: 239 T 218

[Close]

BLAST of PI0003036 vs. NCBI nr
Match: XP_004146860.1 (transcription factor bHLH87 [Cucumis sativus] >KGN59848.1 hypothetical protein Csa_001182 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 3.6e-89
Identity = 181/195 (92.82%), Postives = 184/195 (94.36%), Query Frame = 0


Query: 1   MEVSTGGVLFEVLENDKGIAPKGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLSPSPSQS 60
           MEV+TGGVLFEVLENDKGIA KGGFLDI ENQKPNQQN IIE Q SSTNSTTLSPSP  S
Sbjct: 79  MEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSP--S 138

Query: 61  PSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVA 120
           PSSSNI+EIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRR+NVKMSKEPQTVA
Sbjct: 139 PSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVA 198

Query: 121 ARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFGSIDC 180
           ARKRREKISEKIRVLQRLVPGGSKMDI SMLDEAASYLKFLRAQIKALEGLTYKFGSIDC
Sbjct: 199 ARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQIKALEGLTYKFGSIDC 258

Query: 181 LSTCTSFNPTFPTNP 196
           LSTCT  N TFPTNP
Sbjct: 259 LSTCTPLNSTFPTNP 271

[Close]

BLAST of PI0003036 vs. NCBI nr
Match: XP_008447580.1 (PREDICTED: transcription factor bHLH87-like [Cucumis melo] >KAA0061131.1 transcription factor bHLH87-like [Cucumis melo var. makuwa] >TYK03801.1 transcription factor bHLH87-like [Cucumis melo var. makuwa])

HSP 1 Score: 321.2 bits (822), Expect = 6.0e-84
Identity = 171/195 (87.69%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MEVSTGGVLFEVLENDKGIAPKGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLSPSPSQS 60
           +EV+TGGVLFEVLEND+GIAPKGGFLDIFENQK +QQNPIIEK  SSTNSTT  PSPS S
Sbjct: 78  VEVTTGGVLFEVLENDQGIAPKGGFLDIFENQKLSQQNPIIEKLPSSTNSTT--PSPSPS 137

Query: 61  PSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVA 120
            SSS I+EIEQ VD+D+ VSQMK+WIYYAAVF+PVNLGLETVEKKRRRNVK+SKEPQTVA
Sbjct: 138 SSSSYIEEIEQVVDQDRFVSQMKQWIYYAAVFKPVNLGLETVEKKRRRNVKVSKEPQTVA 197

Query: 121 ARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFGSIDC 180
           ARKRREKISEKIRVL+RLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGL YKFGS DC
Sbjct: 198 ARKRREKISEKIRVLRRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLNYKFGSTDC 257

Query: 181 LSTCTSFNPTFPTNP 196
           LSTCT FNPTFPTNP
Sbjct: 258 LSTCTPFNPTFPTNP 270

[Close]

BLAST of PI0003036 vs. NCBI nr
Match: XP_038902463.1 (transcription factor bHLH87-like [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 3.9e-75
Identity = 158/189 (83.60%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 4   STGGVLFEVLENDKGIAPKGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLSPSPSQSPSS 63
           S+GGVLF+ +ENDKG AP+GGFLDIFENQKP QQN IIEKQ SS NS  ++PS S SPSS
Sbjct: 82  SSGGVLFDEVENDKGSAPQGGFLDIFENQKPKQQNSIIEKQPSSANS--INPSLSPSPSS 141

Query: 64  SNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVAARK 123
           SN DE+E+ VDRDQ+VSQMKE IYYAAVFRPVNLG ETVEKKRRRNVKMSKEPQT+AAR 
Sbjct: 142 SNNDEVERPVDRDQLVSQMKECIYYAAVFRPVNLGSETVEKKRRRNVKMSKEPQTIAARI 201

Query: 124 RREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFGSIDCLST 183
           RREKISEKIRVLQ LVPGG+KMDIASMLDEAASYLKFLRAQIKALEGL+YK GSIDCLST
Sbjct: 202 RREKISEKIRVLQSLVPGGNKMDIASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLST 261

Query: 184 CTSFNPTFP 193
            TSFNP FP
Sbjct: 262 STSFNPNFP 268

[Close]

BLAST of PI0003036 vs. NCBI nr
Match: XP_023528594.1 (transcription factor bHLH87-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.1 bits (614), Expect = 7.9e-60
Identity = 138/187 (73.80%), Postives = 147/187 (78.61%), Query Frame = 0


Query: 7   GVLFEVLENDKGIAPKGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLSPSPSQSPSSSNI 66
           G   E LENDKGIAPKGG LDIFENQKP QQ           NSTT         SSSN 
Sbjct: 56  GASMEELENDKGIAPKGGVLDIFENQKPKQQ-----------NSTT---------SSSNN 115

Query: 67  DEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVAARKRRE 126
           D++ +  +RD+ +SQMKE +YYAAVFRPV+ G ETVEKKRRRNVK SKEPQTVAARKRRE
Sbjct: 116 DQV-KPFNRDRAMSQMKELVYYAAVFRPVSSGSETVEKKRRRNVKTSKEPQTVAARKRRE 175

Query: 127 KISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFGSIDCLSTCTS 186
           KISEKIR LQRLVPGGSKMD ASMLDEAASYLKFLRAQIKALEGL+YK GSIDCLST TS
Sbjct: 176 KISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTS 221

Query: 187 FNPTFPT 194
           FNP FPT
Sbjct: 236 FNPPFPT 221

[Close]

BLAST of PI0003036 vs. NCBI nr
Match: XP_022148257.1 (transcription factor bHLH87-like [Momordica charantia])

HSP 1 Score: 234.6 bits (597), Expect = 7.4e-58
Identity = 136/198 (68.69%), Postives = 155/198 (78.28%), Query Frame = 0


Query: 4   STGGVLFEVLENDKG-IAPKGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLS--PSPSQS 63
           S+GG+L E LENDKG  AP+ G  DIFEN KP QQNPI EKQ SS N        + S S
Sbjct: 87  SSGGLLLEELENDKGRTAPESGSWDIFENPKPKQQNPISEKQPSSANYNGFQQPSNSSPS 146

Query: 64  PSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVA 123
           PSSSN +++E A  R+  +++MK  +Y+AA FRPVNLGLETVEKKRRRNVK SKEPQTVA
Sbjct: 147 PSSSNNNDVEPA-GREAGMARMKAMMYHAAAFRPVNLGLETVEKKRRRNVKTSKEPQTVA 206

Query: 124 ARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFGSIDC 183
           ARKRREKISEKIRVLQRLVPGGSKMD ASMLDEAASYLKFLR Q+KA+E L+YK GS+DC
Sbjct: 207 ARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAASYLKFLREQVKAMEDLSYKLGSLDC 266

Query: 184 LSTCTSFN----PTFPTN 195
           LS CTSF+      FPT+
Sbjct: 267 LSNCTSFSFNSTSAFPTS 283

[Close]

BLAST of PI0003036 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-34
Identity = 91/175 (52.00%), Postives = 117/175 (66.86%), Query Frame = 0


Query: 22  KGGFLDIFENQKPNQQNPIIEKQTSSTNSTTLSPSPSQSPSSSNIDEIEQAVDRDQVVSQ 81
           KGGF  I++  +   + P  EK+   +++ +   S   S      D +E      + ++Q
Sbjct: 194 KGGFKLIYDENQSKSKKPRTEKERGGSSNISFQHSTCLS------DNVEPDA---EAIAQ 253

Query: 82  MKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVAARKRREKISEKIRVLQRLVPG 141
           MKE IY AA FRPVN GLE VEK +R+NVK+S +PQTVAAR+RRE+ISEKIRVLQ LVPG
Sbjct: 254 MKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPG 313

Query: 142 GSKMDIASMLDEAASYLKFLRAQIKALEGLTYKFG--SIDCLSTCTS---FNPTF 192
           G+KMD ASMLDEAA+YLKFLRAQ+KALE L  K    ++   S  TS   F+P+F
Sbjct: 314 GTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSFPLFHPSF 359

[Close]

BLAST of PI0003036 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 2.2e-23
Identity = 58/116 (50.00%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 54  SPSPSQSPSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMS 113
           +PSP     SS++ E       +  ++ M+E I+  AV +P+++  E+V+  +R+NV++S
Sbjct: 72  APSP-----SSSLPEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRIS 131

Query: 114 KEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALE 170
           K+PQ+VAAR RRE+ISE+IR+LQRLVPGG+KMD ASMLDEA  Y+KFL+ Q+++LE
Sbjct: 132 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182

[Close]

BLAST of PI0003036 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 3.7e-23
Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 61  PSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRRNVKMSKEPQTVA 120
           P    +  +++  + D+ +  MKE  Y  AV +PV++   TV K  RRNV++S +PQTV 
Sbjct: 67  PPPETLIHLDEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVV 126

Query: 121 ARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKALE 170
           AR+RRE+ISEKIR+L+R+VPGG+KMD ASMLDEA  Y KFL+ Q++ L+
Sbjct: 127 ARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of PI0003036 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 58/122 (47.54%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 48  TNSTTLSPSPSQSPSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRR 107
           TN +++SP+ + S    +        +    ++ M+E I+  AV +P+++  E V+  +R
Sbjct: 64  TNPSSISPNTAYSSVFLDKRNNSNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKR 123

Query: 108 RNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQIKA 167
           RNV++SK+PQ+VAAR RRE+ISE+IR+LQRLVPGG+KMD ASMLDEA  Y+KFL+ Q+++
Sbjct: 124 RNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQS 183

Query: 168 LE 170
           LE
Sbjct: 184 LE 185

[Close]

BLAST of PI0003036 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.5e-21
Identity = 61/127 (48.03%), Postives = 84/127 (66.14%), Query Frame = 0


Query: 46  SSTNSTTLSPSPSQSPSSSNIDEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKK 105
           SS+ +TT   S  Q       + +E+       +  MKE +Y  A  + V++   TV+K 
Sbjct: 66  SSSLTTTTLLSGDQEDDEDEEEPLEE-------LGAMKEMMYKIAAMQSVDIDPATVKKP 125

Query: 106 RRRNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIASMLDEAASYLKFLRAQI 165
           +RRNV++S +PQ+VAAR RRE+ISE+IR+LQRLVPGG+KMD ASMLDEA  Y+KFL+ QI
Sbjct: 126 KRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQI 185

Query: 166 KALEGLT 173
           + L   T
Sbjct: 186 RLLNNNT 185

The following BLAST results are available for this feature:

BLAST of PI0003036 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S3D2	1.7e-33	52.00	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
A0A0P0WQ90	9.5e-24	57.01	Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q9SND4	3.0e-22	50.00	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
O81313	5.2e-22	50.46	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]
Q9FHA7	1.5e-21	47.54	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]

BLAST of PI0003036 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDH7	1.8e-89	92.82	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850530 PE=4 S...	[more]
A0A5D3BVP3	2.9e-84	87.69	Transcription factor bHLH87-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BIP2	2.9e-84	87.69	transcription factor bHLH87-like OS=Cucumis melo OX=3656 GN=LOC103489996 PE=4 SV...	[more]
A0A6J1D4K8	3.6e-58	68.69	transcription factor bHLH87-like OS=Momordica charantia OX=3673 GN=LOC111016961 ...	[more]
A0A6J1GXV2	4.7e-58	73.48	transcription factor bHLH87-like OS=Cucurbita moschata OX=3662 GN=LOC111457836 P...	[more]

BLAST of PI0003036 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146860.1	3.6e-89	92.82	transcription factor bHLH87 [Cucumis sativus] >KGN59848.1 hypothetical protein C...	[more]
XP_008447580.1	6.0e-84	87.69	PREDICTED: transcription factor bHLH87-like [Cucumis melo] >KAA0061131.1 transcr...	[more]
XP_038902463.1	3.9e-75	83.60	transcription factor bHLH87-like [Benincasa hispida]	[more]
XP_023528594.1	7.9e-60	73.80	transcription factor bHLH87-like [Cucurbita pepo subsp. pepo]	[more]
XP_022148257.1	7.4e-58	68.69	transcription factor bHLH87-like [Momordica charantia]	[more]

BLAST of PI0003036 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21330.1	1.2e-34	52.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	2.2e-23	50.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	3.7e-23	50.46	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	1.1e-22	47.54	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	3.5e-21	48.03	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 118..167 e-value: 1.6E-11 score: 54.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 120..161 e-value: 9.4E-6 score: 25.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 112..161 score: 15.364022
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 111..171 e-value: 8.6E-11 score: 43.4
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 115..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..66
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 24..179
None	No IPR available	PANTHER	PTHR45914:SF12	TRANSCRIPTION FACTOR BHLH87	coord: 24..179
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 113..169 e-value: 1.84693E-33 score: 112.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003036.1	PI0003036.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding