Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAGAGGAAGAGGTAGAAGTAGAAGTGGAAGTAGGAGTAGAACGCGAGAGTCTACAGAGCCAACCATGAATAATTCAGAAGCACATTCCATTAATCCAGATGCAAGGCGAGTTATGGAAGAAGAGTTATATGATCAAGTGGCTCAACAAATGATTAATGGTTTAGCGAGAGACCCAGAGAAAAAGTTTGGAATTGAATGTCTTAAAGTGTTGGGAGCACAAGAGTTTACTGGAACTATAGAACCTGAGGAAGCGGAGAATTGGATTAGAACGCTTAAGAAGTGTTTTCGTGTTATGCAGTGTCCAGAAGATAGGAGAGTGGACTTAGCTATTTTCTTGTTGCAAAGGGGTGTTGAAAATTGGTGGACATTAGAGGAAGGTAGACGGAGAGGTCAGTTGGTTGGAGTTTAA
mRNA sequence
ATGCCAAGAGGAAGAGGTAGAAGTAGAAGTGGAAGTAGGAGTAGAACGCGAGAGTCTACAGAGCCAACCATGAATAATTCAGAAGCACATTCCATTAATCCAGATGCAAGGCGAGTTATGGAAGAAGAGTTATATGATCAAGTGGCTCAACAAATGATTAATGGTTTAGCGAGAGACCCAGAGAAAAAGTTTGGAATTGAATGTCTTAAAGTGTTGGGAGCACAAGAGTTTACTGGAACTATAGAACCTGAGGAAGCGGAGAATTGGATTAGAACGCTTAAGAAGTGTTTTCGTGTTATGCAGTGTCCAGAAGATAGGAGAGTGGACTTAGCTATTTTCTTGTTGCAAAGGGGTGTTGAAAATTGGTGGACATTAGAGGAAGGTAGACGGAGAGGTCAGTTGGTTGGAGTTTAA
Coding sequence (CDS)
ATGCCAAGAGGAAGAGGTAGAAGTAGAAGTGGAAGTAGGAGTAGAACGCGAGAGTCTACAGAGCCAACCATGAATAATTCAGAAGCACATTCCATTAATCCAGATGCAAGGCGAGTTATGGAAGAAGAGTTATATGATCAAGTGGCTCAACAAATGATTAATGGTTTAGCGAGAGACCCAGAGAAAAAGTTTGGAATTGAATGTCTTAAAGTGTTGGGAGCACAAGAGTTTACTGGAACTATAGAACCTGAGGAAGCGGAGAATTGGATTAGAACGCTTAAGAAGTGTTTTCGTGTTATGCAGTGTCCAGAAGATAGGAGAGTGGACTTAGCTATTTTCTTGTTGCAAAGGGGTGTTGAAAATTGGTGGACATTAGAGGAAGGTAGACGGAGAGGTCAGTTGGTTGGAGTTTAA
Protein sequence
MPRGRGRSRSGSRSRTRESTEPTMNNSEAHSINPDARRVMEEELYDQVAQQMINGLARDPEKKFGIECLKVLGAQEFTGTIEPEEAENWIRTLKKCFRVMQCPEDRRVDLAIFLLQRGVENWWTLEEGRRRGQLVGV
Homology
BLAST of PI0002986 vs. ExPASy TrEMBL
Match:
A0A0A0LI31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G163160 PE=4 SV=1)
HSP 1 Score: 143.7 bits (361), Expect = 5.8e-31
Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 0
Query: 21 EPTMNNSEAHSINPDARRVMEEELYDQVAQQMINGLARDPEKKFGIECLKVLGAQEFTGT 80
EPT+ +SEAH++NP+ARR EE LYD+ AQ++IN LA+ +K FGIE +K LGA EF G
Sbjct: 2 EPTI-DSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGI 61
Query: 81 IEPEEAENWIRTLKKCFRVMQCPEDRRVDLAIFLLQRGVENWWTLEEGRR 131
EEAE WIRTL+KCFRVMQCP++RRV+LA+FLL E+WW LEE RR
Sbjct: 62 ENHEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDWWILEENRR 110
BLAST of PI0002986 vs. ExPASy TrEMBL
Match:
A0A5D3DES5 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold991G00660 PE=4 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 2.4e-24
Identity = 67/140 (47.86%), Postives = 91/140 (65.00%), Query Frame = 0
Query: 1 MPRGRGRSRSGSRSRTRESTEPTMNN--SEAHSINPDARRVMEEELYDQVAQQMINGL-- 60
MPRGR R +++ + + E M + S+A S P MEE+L D++AQ++I+G+
Sbjct: 20 MPRGRPRKHPDAKT-SNAAREAAMGSGESDAESSRPHVEGNMEEQLLDRLAQRLISGIRS 79
Query: 61 -ARDPEKKFGIECLKVLGAQEFTGTIEPEEAENWIRTLKKCFRVMQCPEDRRVDLAIFLL 120
DPEKK+GIE LK LGA F GT P +AE W+ ++KCFRV +CPEDR+V+LA FLL
Sbjct: 80 AQSDPEKKYGIERLKALGATTFVGTTNPADAEAWLTLIEKCFRVTRCPEDRKVELASFLL 139
Query: 121 QRG----VENWWTLEEGRRR 132
Q G E+WW +EE RRR
Sbjct: 140 QNGGGAKGEDWWRMEESRRR 158
BLAST of PI0002986 vs. ExPASy TrEMBL
Match:
A0A5D3CSN0 (A-kinase anchor protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00330 PE=4 SV=1)
HSP 1 Score: 119.8 bits (299), Expect = 9.0e-24
Identity = 63/116 (54.31%), Postives = 84/116 (72.41%), Query Frame = 0
Query: 7 RSRSGSRSRTRESTEPTMNNSEAHSINPDARRVMEEELYDQVAQQMINGLARDPEKKFGI 66
R+R GS R++TEPT+ + E H +N D RR EE +YD+VAQ +I+ + + EKKFGI
Sbjct: 5 RARVGS----RKTTEPTI-DLEVHLVNQDVRREQEETVYDRVAQWVIDVMTQQLEKKFGI 64
Query: 67 ECLKVLGAQEFTGTIEPEEAENWIRTLKKCFRVMQCPEDRRVDLAIFLLQRGVENW 123
E L+ LG EFTGT EP EA+ I+TL+KCFRV QC ++R+VDLA+FLLQ E+W
Sbjct: 65 ERLEALGTTEFTGTTEPREADKRIKTLEKCFRVTQCSQERKVDLAMFLLQEYKEDW 115
BLAST of PI0002986 vs. ExPASy TrEMBL
Match:
A0A5A7SJ99 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00100 PE=4 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 1.0e-22
Identity = 62/136 (45.59%), Postives = 87/136 (63.97%), Query Frame = 0
Query: 1 MPRGRGRSRSGSRSRTRESTEPTMNN--SEAHSINPDARRVMEEELYDQVAQQMINGL-- 60
MP+GR R + + + + E M + S+A S P +EE+L D++AQ++I G+
Sbjct: 1 MPQGRPRKHPDAEA-SNAAREAAMGSGESDAESSRPHVEGNVEEQLLDRLAQRLILGIRL 60
Query: 61 -ARDPEKKFGIECLKVLGAQEFTGTIEPEEAENWIRTLKKCFRVMQCPEDRRVDLAIFLL 120
D EKK+GIE LK LGA F GT P +AE W+ ++KCF+V +C EDR+V+LA FLL
Sbjct: 61 AQSDSEKKYGIERLKALGATTFVGTTNPVDAEEWLTLIEKCFKVTRCSEDRKVELAAFLL 120
Query: 121 QRGVENWWTLEEGRRR 132
Q G E+WW +EE RRR
Sbjct: 121 QNGAEDWWHMEESRRR 135
BLAST of PI0002986 vs. ExPASy TrEMBL
Match:
A0A5D3BB91 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001760 PE=4 SV=1)
HSP 1 Score: 111.3 bits (277), Expect = 3.2e-21
Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 0
Query: 1 MPRGRGRSR-SGSRSRTRESTEPTMNNSEAHSINPDARRVMEEELYDQVAQQMINGL--- 60
MPRG+ R S + S+A S P +EE+L D++AQ++++G+
Sbjct: 1 MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSA 60
Query: 61 ARDPEKKFGIECLKVLGAQEFTGTIEPEEAENWIRTLKKCFRVMQCPEDRRVDLAIFLLQ 120
DPEKK+G E LK LGA F GT P + E W+ ++KCFRV + EDR+V+LA FLLQ
Sbjct: 61 QSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKCFRVTRYLEDRKVELAAFLLQ 120
Query: 121 RGVENWWTLEEGRRR 132
E+WW +EE RRR
Sbjct: 121 NDAEDWWRMEESRRR 135
BLAST of PI0002986 vs. NCBI nr
Match:
KGN61535.1 (hypothetical protein Csa_006696 [Cucumis sativus])
HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 0
Query: 21 EPTMNNSEAHSINPDARRVMEEELYDQVAQQMINGLARDPEKKFGIECLKVLGAQEFTGT 80
EPT+ +SEAH++NP+ARR EE LYD+ AQ++IN LA+ +K FGIE +K LGA EF G
Sbjct: 2 EPTI-DSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGI 61
Query: 81 IEPEEAENWIRTLKKCFRVMQCPEDRRVDLAIFLLQRGVENWWTLEEGRR 131
EEAE WIRTL+KCFRVMQCP++RRV+LA+FLL E+WW LEE RR
Sbjct: 62 ENHEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDWWILEENRR 110
BLAST of PI0002986 vs. NCBI nr
Match:
KAA0035225.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21839.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])
HSP 1 Score: 121.7 bits (304), Expect = 4.9e-24
Identity = 67/140 (47.86%), Postives = 91/140 (65.00%), Query Frame = 0
Query: 1 MPRGRGRSRSGSRSRTRESTEPTMNN--SEAHSINPDARRVMEEELYDQVAQQMINGL-- 60
MPRGR R +++ + + E M + S+A S P MEE+L D++AQ++I+G+
Sbjct: 20 MPRGRPRKHPDAKT-SNAAREAAMGSGESDAESSRPHVEGNMEEQLLDRLAQRLISGIRS 79
Query: 61 -ARDPEKKFGIECLKVLGAQEFTGTIEPEEAENWIRTLKKCFRVMQCPEDRRVDLAIFLL 120
DPEKK+GIE LK LGA F GT P +AE W+ ++KCFRV +CPEDR+V+LA FLL
Sbjct: 80 AQSDPEKKYGIERLKALGATTFVGTTNPADAEAWLTLIEKCFRVTRCPEDRKVELASFLL 139
Query: 121 QRG----VENWWTLEEGRRR 132
Q G E+WW +EE RRR
Sbjct: 140 QNGGGAKGEDWWRMEESRRR 158
BLAST of PI0002986 vs. NCBI nr
Match:
KAA0066608.1 (A-kinase anchor protein 12 [Cucumis melo var. makuwa] >TYK14208.1 A-kinase anchor protein 12 [Cucumis melo var. makuwa])
HSP 1 Score: 119.8 bits (299), Expect = 1.9e-23
Identity = 63/116 (54.31%), Postives = 84/116 (72.41%), Query Frame = 0
Query: 7 RSRSGSRSRTRESTEPTMNNSEAHSINPDARRVMEEELYDQVAQQMINGLARDPEKKFGI 66
R+R GS R++TEPT+ + E H +N D RR EE +YD+VAQ +I+ + + EKKFGI
Sbjct: 5 RARVGS----RKTTEPTI-DLEVHLVNQDVRREQEETVYDRVAQWVIDVMTQQLEKKFGI 64
Query: 67 ECLKVLGAQEFTGTIEPEEAENWIRTLKKCFRVMQCPEDRRVDLAIFLLQRGVENW 123
E L+ LG EFTGT EP EA+ I+TL+KCFRV QC ++R+VDLA+FLLQ E+W
Sbjct: 65 ERLEALGTTEFTGTTEPREADKRIKTLEKCFRVTQCSQERKVDLAMFLLQEYKEDW 115
BLAST of PI0002986 vs. NCBI nr
Match:
KAA0026280.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21476.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])
HSP 1 Score: 116.3 bits (290), Expect = 2.1e-22
Identity = 62/136 (45.59%), Postives = 87/136 (63.97%), Query Frame = 0
Query: 1 MPRGRGRSRSGSRSRTRESTEPTMNN--SEAHSINPDARRVMEEELYDQVAQQMINGL-- 60
MP+GR R + + + + E M + S+A S P +EE+L D++AQ++I G+
Sbjct: 1 MPQGRPRKHPDAEA-SNAAREAAMGSGESDAESSRPHVEGNVEEQLLDRLAQRLILGIRL 60
Query: 61 -ARDPEKKFGIECLKVLGAQEFTGTIEPEEAENWIRTLKKCFRVMQCPEDRRVDLAIFLL 120
D EKK+GIE LK LGA F GT P +AE W+ ++KCF+V +C EDR+V+LA FLL
Sbjct: 61 AQSDSEKKYGIERLKALGATTFVGTTNPVDAEEWLTLIEKCFKVTRCSEDRKVELAAFLL 120
Query: 121 QRGVENWWTLEEGRRR 132
Q G E+WW +EE RRR
Sbjct: 121 QNGAEDWWHMEESRRR 135
BLAST of PI0002986 vs. NCBI nr
Match:
KAA0036813.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])
HSP 1 Score: 111.3 bits (277), Expect = 6.6e-21
Identity = 58/135 (42.96%), Postives = 80/135 (59.26%), Query Frame = 0
Query: 1 MPRGRGRSR-SGSRSRTRESTEPTMNNSEAHSINPDARRVMEEELYDQVAQQMINGL--- 60
MPRG+ R S + S+A S P +EE+L D++AQ++++G+
Sbjct: 1 MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSA 60
Query: 61 ARDPEKKFGIECLKVLGAQEFTGTIEPEEAENWIRTLKKCFRVMQCPEDRRVDLAIFLLQ 120
DPEKK+G E LK LGA F GT P + E W+ ++KCFRV + EDR+V+LA FLLQ
Sbjct: 61 QSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKCFRVTRYLEDRKVELAAFLLQ 120
Query: 121 RGVENWWTLEEGRRR 132
E+WW +EE RRR
Sbjct: 121 NDAEDWWRMEESRRR 135
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LI31 | 5.8e-31 | 62.73 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G163160 PE=4 SV=1 | [more] |
A0A5D3DES5 | 2.4e-24 | 47.86 | DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
A0A5D3CSN0 | 9.0e-24 | 54.31 | A-kinase anchor protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
A0A5A7SJ99 | 1.0e-22 | 45.59 | DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
A0A5D3BB91 | 3.2e-21 | 42.96 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... | [more] |
Match Name | E-value | Identity | Description | |
KGN61535.1 | 1.2e-30 | 62.73 | hypothetical protein Csa_006696 [Cucumis sativus] | [more] |
KAA0035225.1 | 4.9e-24 | 47.86 | DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21839.1 D... | [more] |
KAA0066608.1 | 1.9e-23 | 54.31 | A-kinase anchor protein 12 [Cucumis melo var. makuwa] >TYK14208.1 A-kinase ancho... | [more] |
KAA0026280.1 | 2.1e-22 | 45.59 | DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21476.1 D... | [more] |
KAA0036813.1 | 6.6e-21 | 42.96 | DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |