PI0002540 (gene) Melon (PI 482460) v1

Overview


Name	PI0002540
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Reverse transcriptase
Location	chr02: 15558607 .. 15560048 (+)
RNA-Seq Expression	PI0002540
Synteny	PI0002540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGAGGCTACATCATTCCGCGAGTTTGTCCGTGGGTTTCGAATTTCGAACGACTGACTTGTTCATCGAGCTAGAACAAGCACCGCACAATCACTCGCCTCGTCTTTGAAAGGCTACGCTTGTGACAAGTGGTATCAGAGCCTCATTGGTTTATTGACGGTTGAGACACAGACATGTCTGCAGCGAAACAGATAGGCAAGGCCCACGCAGACCGATTGGTAGAGATCGAAAAGCAGATGCTCTACCTGCTGAAATTTCGGATACCGTCCGCTTCTTGGAAGGTCGGATTGAGGAAGTGTCCGAGAAAGCTGATGCTATTGACGCGGTGACCGGTCGCCTCGACAGATTACCTATAAAGGAGTTGTTAACAAAAGTTGACACTTTAGAGGCAAAGGCTACAAGAATAAACTACGAACGTGGGGGCAGTTCAACGGGCTCTATTGCCCACGTAGAGGAACGGATTGGCGAGCTAGATAGCTCCCAAAAGTCGATTGTCGAGATGATAAATGACATGTCAGAGGATTTCCGTGCCGCCCTTGACATCGTTAGGAATGAGATCGCAGACGTGAGCGCGAGGGTGAACCTCACGATGCGAGCCATGGCAAACCAAGCTCCAACTGGAGGAGCTATACAAGTTAACAGGGTGAAAATCCGCGAACCCAAACCCTTCTGTGGGGCGAGGGACGCAAAAGCCTTGGAGAACTTCATATTTGACCTCGAACAATACTTTCGGGCCACAAACATTGTTGCGGAGGAAGCGAAAGTGACACTGGCAACGATGCACCAAGCTGAGGATGTAAAGTTGTGGTGGAGGTCCCGGTATGCCGAGATCCAAGAAGGACGATGCACGATAGACACCTGGGACAGTTTAAAGAAAGAGCTACGCTCACAGTTCTTCCCCGATAATGTTGAAATCCTTGCTCGACGAAAGTTACGTGAACTAAAACATACCGGTAGCATTCGAGATTATGTGAAACAGTTTGCGGGACTGATGTTAGACATATGCGATATGTTCGAGAAAGACAAAATTTTCTATTTTGTCGAAGGCCTTAAACCATGGGCGAAGACCAAGCTATACGAACAGAGGGTCCAAGAACTCTCATCGGCATACGCAGCGGCAGAACGACTATTTGACCTGTCCAGTGACTCTCAAGATGCGAGACGTCTTCCAAGTTACTCGTTTGGAGGAAATAAGAACAATCGTGCAAGTTTCCCAAAGGCCGGAGGGGGAGATAGAGGATCTAATGGTGATCATAGGCCCTTCCAATCAAACACCGGGAACACGGGGCGAGGACAGAACCCCCAAAACTCTCACAGTCGTCCCTTTGCCTATTTCATATGTAAGGGGCCGCACATGGCGAGAGAATGTTTGAATCGAATCGCCTTCAACGCCTTTCAGGCTGCCTTAACCTCAGACTCGGATGACAAGAATGGTTAA

mRNA sequence

ATGAAGGGAGGCTACATCATTCCGCGAGTTTGTCCACATGTCTGCAGCGAAACAGATAGGCAAGGCCCACGCAGACCGATTGGTAGAGATCGAAAAGCAGATGCTCTACCTGCTGAAATTTCGGATACCGTCCGCTTCTTGGAAGGTCGGATTGAGGAAGTGTCCGAGAAAGCTGATGCTATTGACGCGGTGACCGGTCGCCTCGACAGATTACCTATAAAGGAGTTGTTAACAAAAGTTGACACTTTAGAGGCAAAGGCTACAAGAATAAACTACGAACGTGGGGGCAGTTCAACGGGCTCTATTGCCCACGTAGAGGAACGGATTGGCGAGCTAGATAGCTCCCAAAAGTCGATTGTCGAGATGATAAATGACATGTCAGAGGATTTCCGTGCCGCCCTTGACATCGTTAGGAATGAGATCGCAGACAGGGTCCAAGAACTCTCATCGGCATACGCAGCGGCAGAACGACTATTTGACCTGTCCAGTGACTCTCAAGATGCGAGACGTCTTCCAAGTTACTCGTTTGGAGGAAATAAGAACAATCGTGCAAGTTTCCCAAAGGCCGGAGGGGGAGATAGAGGATCTAATGGTGATCATAGGCCCTTCCAATCAAACACCGGGAACACGGGGCGAGGACAGAACCCCCAAAACTCTCACAGTCGTCCCTTTGCCTATTTCATATGTAAGGGGCCGCACATGGCGAGAGAATGTTTGAATCGAATCGCCTTCAACGCCTTTCAGGCTGCCTTAACCTCAGACTCGGATGACAAGAATGGTTAA

Coding sequence (CDS)

ATGAAGGGAGGCTACATCATTCCGCGAGTTTGTCCACATGTCTGCAGCGAAACAGATAGGCAAGGCCCACGCAGACCGATTGGTAGAGATCGAAAAGCAGATGCTCTACCTGCTGAAATTTCGGATACCGTCCGCTTCTTGGAAGGTCGGATTGAGGAAGTGTCCGAGAAAGCTGATGCTATTGACGCGGTGACCGGTCGCCTCGACAGATTACCTATAAAGGAGTTGTTAACAAAAGTTGACACTTTAGAGGCAAAGGCTACAAGAATAAACTACGAACGTGGGGGCAGTTCAACGGGCTCTATTGCCCACGTAGAGGAACGGATTGGCGAGCTAGATAGCTCCCAAAAGTCGATTGTCGAGATGATAAATGACATGTCAGAGGATTTCCGTGCCGCCCTTGACATCGTTAGGAATGAGATCGCAGACAGGGTCCAAGAACTCTCATCGGCATACGCAGCGGCAGAACGACTATTTGACCTGTCCAGTGACTCTCAAGATGCGAGACGTCTTCCAAGTTACTCGTTTGGAGGAAATAAGAACAATCGTGCAAGTTTCCCAAAGGCCGGAGGGGGAGATAGAGGATCTAATGGTGATCATAGGCCCTTCCAATCAAACACCGGGAACACGGGGCGAGGACAGAACCCCCAAAACTCTCACAGTCGTCCCTTTGCCTATTTCATATGTAAGGGGCCGCACATGGCGAGAGAATGTTTGAATCGAATCGCCTTCAACGCCTTTCAGGCTGCCTTAACCTCAGACTCGGATGACAAGAATGGTTAA

Protein sequence

MKGGYIIPRVCPHVCSETDRQGPRRPIGRDRKADALPAEISDTVRFLEGRIEEVSEKADAIDAVTGRLDRLPIKELLTKVDTLEAKATRINYERGGSSTGSIAHVEERIGELDSSQKSIVEMINDMSEDFRAALDIVRNEIADRVQELSSAYAAAERLFDLSSDSQDARRLPSYSFGGNKNNRASFPKAGGGDRGSNGDHRPFQSNTGNTGRGQNPQNSHSRPFAYFICKGPHMARECLNRIAFNAFQAALTSDSDDKNG

Homology

[Close]

BLAST of PI0002540 vs. ExPASy TrEMBL
Match: A0A5D3DEJ3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00860 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 3.7e-58
Identity = 142/317 (44.79%), Postives = 177/317 (55.84%), Query Frame = 0


Query: 39  EISDTVRFLEGRIEEVSEKADAIDAVTGRLDRLPIKELLTKVDTLEAK---ATRINYERG 98
           E+ D++R+LE  ++E+SEK + IDAV GR++  PI+EL+T+VD LE        +NYERG
Sbjct: 27  EVLDSIRYLESHLDEISEKTNTIDAVAGRVEGFPIQELMTRVDALETTINIGRTVNYERG 86

Query: 99  GSSTGSIAHVEERIGELDSSQKSIVEMINDMSEDFRAALDIVRNEIAD------------ 158
            SST S+AH+EER+ ELDSSQK+++EMIN MSEDFRA L++VRNEIAD            
Sbjct: 87  DSSTSSVAHIEERVQELDSSQKTLLEMINSMSEDFRATLNVVRNEIADVNARLSLTIREG 146

Query: 159 ------------------------------------------------------------ 218
                                                                       
Sbjct: 147 LENYIFDLEQYFKATNTVTEEAKVTLAMMHLSEDAKLWWSIREYVKQFAGLMLDIRDMSE 206

Query: 219 ----------------------RVQELSSAYAAAERLFDLSSDSQDARRLPSYSFGGNKN 259
                                 RVQ+L+SAYAAAERLFDLS+D QD RR PS S GG++N
Sbjct: 207 KDKVFCFVKGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDFQDTRRHPSSSSGGSRN 266

[Close]

BLAST of PI0002540 vs. ExPASy TrEMBL
Match: A0A5A7UYM0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G001390 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 3.7e-58
Identity = 142/317 (44.79%), Postives = 177/317 (55.84%), Query Frame = 0


Query: 39  EISDTVRFLEGRIEEVSEKADAIDAVTGRLDRLPIKELLTKVDTLEAK---ATRINYERG 98
           E+ D++R+LE  ++E+SEK + IDAV GR++  PI+EL+T+VD LE        +NYERG
Sbjct: 27  EVLDSIRYLESHLDEISEKTNTIDAVAGRVEGFPIQELMTRVDALETTINIGRTVNYERG 86

Query: 99  GSSTGSIAHVEERIGELDSSQKSIVEMINDMSEDFRAALDIVRNEIAD------------ 158
            SST S+AH+EER+ ELDSSQK+++EMIN MSEDFRA L++VRNEIAD            
Sbjct: 87  DSSTSSVAHIEERVQELDSSQKTLLEMINSMSEDFRATLNVVRNEIADVNARLSLTIREG 146

Query: 159 ------------------------------------------------------------ 218
                                                                       
Sbjct: 147 LENYIFDLEQYFKATNTVTEEAKVTLAMMHLSEDAKLWWSIREYVKQFAGLMLDIRDMSE 206

Query: 219 ----------------------RVQELSSAYAAAERLFDLSSDSQDARRLPSYSFGGNKN 259
                                 RVQ+L+SAYAAAERLFDLS+D QD RR PS S GG++N
Sbjct: 207 KDKVFCFVKGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDFQDTRRHPSSSSGGSRN 266

[Close]

BLAST of PI0002540 vs. ExPASy TrEMBL
Match: A0A5A7SQC7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43053G00490 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 9.9e-56
Identity = 148/369 (40.11%), Postives = 181/369 (49.05%), Query Frame = 0


Query: 39  EISDTVRFLEGRIEEVSEKADAIDAVTGRLDRLPIKELLTKVDTLEAKAT---RINYERG 98
           E+ D++R+LE R+EE+SEK + IDAV GR++  PI+EL+T+VD LE        +NYERG
Sbjct: 27  EVPDSIRYLESRLEEISEKTNTIDAVAGRVEGFPIQELMTRVDALETTVNIGRTVNYERG 86

Query: 99  GSSTGSIAHVEERIGELDSSQKSIVEMINDMSEDFRAALDIVRNEIAD------------ 158
            SSTGS+AH+EER+ ELDSSQK+++EMIN MSEDFRA LD+VRNEIAD            
Sbjct: 87  DSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATLDVVRNEIADVNARLSLTMRAM 146

Query: 159 ------------------------------------------------------------ 218
                                                                       
Sbjct: 147 ANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLATM 206

Query: 219 ------------------------------------------------------------ 259
                                                                       
Sbjct: 207 HLSEDAKLWWRSRFVDIQEGRCTIDTWDALKRELRSQFFPENVEILARRKLRELKHTGSI 266

[Close]

BLAST of PI0002540 vs. ExPASy TrEMBL
Match: A0A5D3D8M3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00030 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 140/332 (42.17%), Postives = 174/332 (52.41%), Query Frame = 0


Query: 39  EISDTVRFLEGRIEEVSEKADAIDAVTGRLDRLPIKELLTKVDTLEAKAT---RINYERG 98
           E+ D++R+LE R++E+SEK + ID V G ++  PI+EL+ +VD LE        +NYERG
Sbjct: 27  EVPDSIRYLESRLDEISEKTNTIDVVAGCVEGFPIQELMARVDALETNINIERTVNYERG 86

Query: 99  GSSTGSIAHVEERIGELDSSQKSIVEMINDMSEDFRAALDIVRNEIAD------------ 158
            SSTGS+AH+EER+ ELDSS K+++EMIN MSEDFRA LD+VRNEIAD            
Sbjct: 87  DSSTGSVAHIEERVQELDSSPKTLLEMINGMSEDFRATLDVVRNEIADVNARLSLTMRAM 146

Query: 159 ------------------------------------------------------------ 218
                                                                       
Sbjct: 147 ANQAPTGEPFRTSGPQTRLQRKPKSRWRRCICLRMPSYGGGPDLLTCRRDLRKLKYTGSI 206

Query: 219 -------------------------------------RVQELSSAYAAAERLFDLSSDSQ 259
                                                RVQ+L+SAYAAAERLFDLS+DSQ
Sbjct: 207 QEYVGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQ 266

[Close]

BLAST of PI0002540 vs. ExPASy TrEMBL
Match: A0A5D3C9P8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00750 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 145/366 (39.62%), Postives = 180/366 (49.18%), Query Frame = 0


Query: 39  EISDTVRFLEGRIEEVSEKADAIDAVTGRLDRLPIKELLTKVDTLEAK---ATRINYERG 98
           E+ D++R+LE R++E+SEK + IDAV GR++  PI+EL+T+VD LE        +NYERG
Sbjct: 27  EVPDSIRYLESRLDEISEKTNTIDAVAGRVEGFPIQELMTRVDALETTINIGRTVNYERG 86

Query: 99  GSSTGSIAHVEERIGELDSSQKSIVEMINDMSEDFRAALDIVRNEIAD------------ 158
            SSTGS+AH+EER+ ELDSSQK+++EM+N MSEDFRA LD+VRNEIAD            
Sbjct: 87  DSSTGSVAHIEERVQELDSSQKTLLEMMNGMSEDFRATLDVVRNEIADVNARLSLIMRAM 146

Query: 159 ------------------------------------------------------------ 218
                                                                       
Sbjct: 147 ANQAPAGGAIPVSRVKIPEPKPFCGARNAKALENYIFDLEQYFRATNTEGRCAINTWDAL 206

Query: 219 ------------------------------------------------------------ 259
                                                                       
Sbjct: 207 KRELRSQFFPKNVEILVRRKLREPKHTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGL 266

[Close]

BLAST of PI0002540 vs. NCBI nr
Match: KAA0060348.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 235.0 bits (598), Expect = 7.5e-58
Identity = 142/317 (44.79%), Postives = 177/317 (55.84%), Query Frame = 0


Query: 39  EISDTVRFLEGRIEEVSEKADAIDAVTGRLDRLPIKELLTKVDTLEAK---ATRINYERG 98
           E+ D++R+LE  ++E+SEK + IDAV GR++  PI+EL+T+VD LE        +NYERG
Sbjct: 27  EVLDSIRYLESHLDEISEKTNTIDAVAGRVEGFPIQELMTRVDALETTINIGRTVNYERG 86

Query: 99  GSSTGSIAHVEERIGELDSSQKSIVEMINDMSEDFRAALDIVRNEIAD------------ 158
            SST S+AH+EER+ ELDSSQK+++EMIN MSEDFRA L++VRNEIAD            
Sbjct: 87  DSSTSSVAHIEERVQELDSSQKTLLEMINSMSEDFRATLNVVRNEIADVNARLSLTIREG 146

Query: 159 ------------------------------------------------------------ 218
                                                                       
Sbjct: 147 LENYIFDLEQYFKATNTVTEEAKVTLAMMHLSEDAKLWWSIREYVKQFAGLMLDIRDMSE 206

Query: 219 ----------------------RVQELSSAYAAAERLFDLSSDSQDARRLPSYSFGGNKN 259
                                 RVQ+L+SAYAAAERLFDLS+D QD RR PS S GG++N
Sbjct: 207 KDKVFCFVKGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDFQDTRRHPSSSSGGSRN 266

[Close]

BLAST of PI0002540 vs. NCBI nr
Match: TYK22097.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 235.0 bits (598), Expect = 7.5e-58
Identity = 142/317 (44.79%), Postives = 177/317 (55.84%), Query Frame = 0


Query: 39  EISDTVRFLEGRIEEVSEKADAIDAVTGRLDRLPIKELLTKVDTLEAK---ATRINYERG 98
           E+ D++R+LE  ++E+SEK + IDAV GR++  PI+EL+T+VD LE        +NYERG
Sbjct: 27  EVLDSIRYLESHLDEISEKTNTIDAVAGRVEGFPIQELMTRVDALETTINIGRTVNYERG 86

Query: 99  GSSTGSIAHVEERIGELDSSQKSIVEMINDMSEDFRAALDIVRNEIAD------------ 158
            SST S+AH+EER+ ELDSSQK+++EMIN MSEDFRA L++VRNEIAD            
Sbjct: 87  DSSTSSVAHIEERVQELDSSQKTLLEMINSMSEDFRATLNVVRNEIADVNARLSLTIREG 146

Query: 159 ------------------------------------------------------------ 218
                                                                       
Sbjct: 147 LENYIFDLEQYFKATNTVTEEAKVTLAMMHLSEDAKLWWSIREYVKQFAGLMLDIRDMSE 206

Query: 219 ----------------------RVQELSSAYAAAERLFDLSSDSQDARRLPSYSFGGNKN 259
                                 RVQ+L+SAYAAAERLFDLS+D QD RR PS S GG++N
Sbjct: 207 KDKVFCFVKGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDFQDTRRHPSSSSGGSRN 266

[Close]

BLAST of PI0002540 vs. NCBI nr
Match: KAA0032583.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-55
Identity = 148/369 (40.11%), Postives = 181/369 (49.05%), Query Frame = 0


Query: 39  EISDTVRFLEGRIEEVSEKADAIDAVTGRLDRLPIKELLTKVDTLEAKAT---RINYERG 98
           E+ D++R+LE R+EE+SEK + IDAV GR++  PI+EL+T+VD LE        +NYERG
Sbjct: 27  EVPDSIRYLESRLEEISEKTNTIDAVAGRVEGFPIQELMTRVDALETTVNIGRTVNYERG 86

Query: 99  GSSTGSIAHVEERIGELDSSQKSIVEMINDMSEDFRAALDIVRNEIAD------------ 158
            SSTGS+AH+EER+ ELDSSQK+++EMIN MSEDFRA LD+VRNEIAD            
Sbjct: 87  DSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATLDVVRNEIADVNARLSLTMRAM 146

Query: 159 ------------------------------------------------------------ 218
                                                                       
Sbjct: 147 ANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYIFDLEQYFRATNTVTEEAKVTLATM 206

Query: 219 ------------------------------------------------------------ 259
                                                                       
Sbjct: 207 HLSEDAKLWWRSRFVDIQEGRCTIDTWDALKRELRSQFFPENVEILARRKLRELKHTGSI 266

[Close]

BLAST of PI0002540 vs. NCBI nr
Match: TYK07954.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 3.0e-54
Identity = 145/366 (39.62%), Postives = 180/366 (49.18%), Query Frame = 0


Query: 39  EISDTVRFLEGRIEEVSEKADAIDAVTGRLDRLPIKELLTKVDTLEAK---ATRINYERG 98
           E+ D++R+LE R++E+SEK + IDAV GR++  PI+EL+T+VD LE        +NYERG
Sbjct: 27  EVPDSIRYLESRLDEISEKTNTIDAVAGRVEGFPIQELMTRVDALETTINIGRTVNYERG 86

Query: 99  GSSTGSIAHVEERIGELDSSQKSIVEMINDMSEDFRAALDIVRNEIAD------------ 158
            SSTGS+AH+EER+ ELDSSQK+++EM+N MSEDFRA LD+VRNEIAD            
Sbjct: 87  DSSTGSVAHIEERVQELDSSQKTLLEMMNGMSEDFRATLDVVRNEIADVNARLSLIMRAM 146

Query: 159 ------------------------------------------------------------ 218
                                                                       
Sbjct: 147 ANQAPAGGAIPVSRVKIPEPKPFCGARNAKALENYIFDLEQYFRATNTEGRCAINTWDAL 206

Query: 219 ------------------------------------------------------------ 259
                                                                       
Sbjct: 207 KRELRSQFFPKNVEILVRRKLREPKHTGSIREYVKQFAGLMLDIRDMSEKDKVFCFVEGL 266

[Close]

BLAST of PI0002540 vs. NCBI nr
Match: KAA0064695.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK19894.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 3.0e-54
Identity = 140/332 (42.17%), Postives = 174/332 (52.41%), Query Frame = 0


Query: 39  EISDTVRFLEGRIEEVSEKADAIDAVTGRLDRLPIKELLTKVDTLEAKAT---RINYERG 98
           E+ D++R+LE R++E+SEK + ID V G ++  PI+EL+ +VD LE        +NYERG
Sbjct: 27  EVPDSIRYLESRLDEISEKTNTIDVVAGCVEGFPIQELMARVDALETNINIERTVNYERG 86

Query: 99  GSSTGSIAHVEERIGELDSSQKSIVEMINDMSEDFRAALDIVRNEIAD------------ 158
            SSTGS+AH+EER+ ELDSS K+++EMIN MSEDFRA LD+VRNEIAD            
Sbjct: 87  DSSTGSVAHIEERVQELDSSPKTLLEMINGMSEDFRATLDVVRNEIADVNARLSLTMRAM 146

Query: 159 ------------------------------------------------------------ 218
                                                                       
Sbjct: 147 ANQAPTGEPFRTSGPQTRLQRKPKSRWRRCICLRMPSYGGGPDLLTCRRDLRKLKYTGSI 206

Query: 219 -------------------------------------RVQELSSAYAAAERLFDLSSDSQ 259
                                                RVQ+L+SAYAAAERLFDLS+DSQ
Sbjct: 207 QEYVGLMLDIRDMSEKDKVFCFVEGLKPWAKTKLYEQRVQDLTSAYAAAERLFDLSNDSQ 266

The following BLAST results are available for this feature:

BLAST of PI0002540 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DEJ3	3.7e-58	44.79	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold31...	[more]
A0A5A7UYM0	3.7e-58	44.79	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22...	[more]
A0A5A7SQC7	9.9e-56	40.11	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5D3D8M3	1.4e-54	42.17	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13...	[more]
A0A5D3C9P8	1.4e-54	39.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26...	[more]

BLAST of PI0002540 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060348.1	7.5e-58	44.79	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK22097.1	7.5e-58	44.79	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0032583.1	2.1e-55	40.11	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK07954.1	3.0e-54	39.62	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0064695.1	3.0e-54	42.17	reverse transcriptase [Cucumis melo var. makuwa] >TYK19894.1 reverse transcripta...	[more]

BLAST of PI0002540 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 73..93
None	No IPR available	COILS	Coil	Coil	coord: 138..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002540.1	PI0002540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process