Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGATTATGCAAACAAAACGGAGAAATATGGGTTATGGCTCTTCAAAATCCAAAGTTCTTTCGAACAAAGCTACAACCATTGTGAAACCATATACCATTCATCAAACAAAGAAATCCAATAGTAATTCTGAGTTAGCAAACTTCAAATGTCCATCACCAAAGAACAATAGTGTGTTGTCGTCCATAAAGGCAAACACTAATATTGTAGTATTGTCACCAAGAAAAGCTACTCGAGTTCGAATGCTAAAAGCCAAATTTGGCAGTATCATTTTGAAGGCTCAACAAAAACTTTCTAATTCCAATAATAATTCTAATATCTACGAATATATTGTTGTGGCTCCAAAGATATGCTCCATACAAGAGCAAAGACGAGCTTCAAGAGAAGCTCTTGACAAGATCAAGCCAGACTTTGATTTCAATGAGAATATGGATTCCATGAGAGAATTCGACAAATTATTGAAGTAA
mRNA sequence
ATGAGGATTATGCAAACAAAACGGAGAAATATGGGTTATGGCTCTTCAAAATCCAAAGTTCTTTCGAACAAAGCTACAACCATTGTGAAACCATATACCATTCATCAAACAAAGAAATCCAATAGTAATTCTGAGTTAGCAAACTTCAAATGTCCATCACCAAAGAACAATAGTGTGTTGTCGTCCATAAAGGCAAACACTAATATTGTAGTATTGTCACCAAGAAAAGCTACTCGAGTTCGAATGCTAAAAGCCAAATTTGGCAGTATCATTTTGAAGGCTCAACAAAAACTTTCTAATTCCAATAATAATTCTAATATCTACGAATATATTGTTGTGGCTCCAAAGATATGCTCCATACAAGAGCAAAGACGAGCTTCAAGAGAAGCTCTTGACAAGATCAAGCCAGACTTTGATTTCAATGAGAATATGGATTCCATGAGAGAATTCGACAAATTATTGAAGTAA
Coding sequence (CDS)
ATGAGGATTATGCAAACAAAACGGAGAAATATGGGTTATGGCTCTTCAAAATCCAAAGTTCTTTCGAACAAAGCTACAACCATTGTGAAACCATATACCATTCATCAAACAAAGAAATCCAATAGTAATTCTGAGTTAGCAAACTTCAAATGTCCATCACCAAAGAACAATAGTGTGTTGTCGTCCATAAAGGCAAACACTAATATTGTAGTATTGTCACCAAGAAAAGCTACTCGAGTTCGAATGCTAAAAGCCAAATTTGGCAGTATCATTTTGAAGGCTCAACAAAAACTTTCTAATTCCAATAATAATTCTAATATCTACGAATATATTGTTGTGGCTCCAAAGATATGCTCCATACAAGAGCAAAGACGAGCTTCAAGAGAAGCTCTTGACAAGATCAAGCCAGACTTTGATTTCAATGAGAATATGGATTCCATGAGAGAATTCGACAAATTATTGAAGTAA
Protein sequence
MRIMQTKRRNMGYGSSKSKVLSNKATTIVKPYTIHQTKKSNSNSELANFKCPSPKNNSVLSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVVAPKICSIQEQRRASREALDKIKPDFDFNENMDSMREFDKLLK
Homology
BLAST of PI0002482 vs. ExPASy TrEMBL
Match:
A0A5A7VFH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003590 PE=4 SV=1)
HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41
Identity = 109/160 (68.12%), Postives = 125/160 (78.12%), Query Frame = 0
Query: 1 MRIMQTKRRNMGYGSSKSKVLSNKATTIV-KPYT-IHQTKKSNSNSELANFKCPSPKNN- 60
MR+MQ KRR + K KVLS K TT V + YT IHQTKKSNSN ELA F+ PS KNN
Sbjct: 1 MRMMQAKRRYVNDRFPKRKVLSTKVTTTVGELYTAIHQTKKSNSNHELAKFESPSSKNNN 60
Query: 61 -SVLSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV-AP 120
+ LS K T I+VLSPR+A RV MLK KFGS ILKAQQKL SN +SNIY+Y+VV AP
Sbjct: 61 STTLSPKKTKTTIIVLSPRQAARVEMLKEKFGSTILKAQQKL--SNKDSNIYKYVVVEAP 120
Query: 121 KICSIQEQRRASREALDKIKPDFDFNENMDSMREFDKLLK 156
K+CSIQEQRRASRE+LDKIKP FDFNEN+DSMR+F++LLK
Sbjct: 121 KVCSIQEQRRASRESLDKIKPVFDFNENLDSMRDFEELLK 158
BLAST of PI0002482 vs. ExPASy TrEMBL
Match:
A0A5D3D8Q3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00700 PE=4 SV=1)
HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41
Identity = 109/160 (68.12%), Postives = 125/160 (78.12%), Query Frame = 0
Query: 1 MRIMQTKRRNMGYGSSKSKVLSNKATTIV-KPYT-IHQTKKSNSNSELANFKCPSPKNNS 60
MR+MQ KRR + K KVLS K TT V + YT IHQTKKSNSN ELA F+ PS KNN+
Sbjct: 1 MRMMQAKRRYVNDRFPKRKVLSTKVTTTVGELYTAIHQTKKSNSNHELAKFESPSSKNNN 60
Query: 61 --VLSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV-AP 120
LS K T I+VLSPR+A RV MLK KFGS ILKAQQKL SN +SNIY+Y+VV AP
Sbjct: 61 SPTLSPKKTKTTIIVLSPRQAARVEMLKEKFGSTILKAQQKL--SNKDSNIYKYVVVEAP 120
Query: 121 KICSIQEQRRASREALDKIKPDFDFNENMDSMREFDKLLK 156
K+CSIQEQRRASRE+LDKIKP FDFNEN+DSMR+F++LLK
Sbjct: 121 KVCSIQEQRRASRESLDKIKPVFDFNENLDSMRDFEELLK 158
BLAST of PI0002482 vs. ExPASy TrEMBL
Match:
A0A0A0KMZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G164650 PE=4 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 2.4e-41
Identity = 103/157 (65.61%), Postives = 120/157 (76.43%), Query Frame = 0
Query: 1 MRIMQTKRRNMGYGSSKSKVLSNKATTIVKPYTIHQTKKSNSNSELANFKCPSPKNNSV- 60
MR+MQTKRR + Y K KVLS K T +KPY IHQ K+SN + EL NFKC SPK N++
Sbjct: 1 MRMMQTKRRYIDYHMLKPKVLSTKVTKTMKPYNIHQRKESNGDHELTNFKCLSPKKNNIE 60
Query: 61 LSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV--APKI 120
L IK NT IVVLSPR+A RV +LKAKFGS I KAQQKL SNN+SN YEY+V+ PK
Sbjct: 61 LLPIKPNTTIVVLSPRRAARVEVLKAKFGSTIWKAQQKLQKSNNDSNKYEYVVIGATPKT 120
Query: 121 CSI-QEQRRASREALDK-IKPDFDFNENMDSMREFDK 153
CSI QEQ+RASREALDK I P FDFNEN+DSM+EF++
Sbjct: 121 CSILQEQKRASREALDKMINPVFDFNENLDSMKEFER 157
BLAST of PI0002482 vs. ExPASy TrEMBL
Match:
A0A0A0KRB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162640 PE=4 SV=1)
HSP 1 Score: 170.2 bits (430), Expect = 6.6e-39
Identity = 94/126 (74.60%), Postives = 105/126 (83.33%), Query Frame = 0
Query: 31 PYTIHQTKKSNSNSELANFKCPSPKNNSVLSSIKANTNIVVLSPRKATRVRMLKAKFGSI 90
PY IHQ K+SNS+ +LANFKCPSPKNN + IK NT IVVLSPR+A RV +LKAKFGS
Sbjct: 3 PYNIHQIKESNSDHDLANFKCPSPKNNIAVLPIKPNT-IVVLSPRRAARVEVLKAKFGST 62
Query: 91 ILKAQQKLSNSNNNSNIYEYIVVA-PKICSIQEQRRASREALDKIKPDFDFNENMDSMRE 150
ILKAQQKL NSNN+SN +EYIV A P ICSIQEQR+A REALDKI P FDFNEN+DSMRE
Sbjct: 63 ILKAQQKLHNSNNDSNKHEYIVGATPNICSIQEQRQALREALDKINPAFDFNENLDSMRE 122
Query: 151 FDKLLK 156
F KLL+
Sbjct: 123 FAKLLE 127
BLAST of PI0002482 vs. NCBI nr
Match:
KAE8647905.1 (hypothetical protein Csa_000421, partial [Cucumis sativus])
HSP 1 Score: 197.2 bits (500), Expect = 1.0e-46
Identity = 109/159 (68.55%), Postives = 129/159 (81.13%), Query Frame = 0
Query: 1 MRIMQTKRRNMGYGSSKSKVLSNKATTIVKPYTIHQTKKSNSNSELANFKCPSPKNNSV- 60
M++MQTKRR++ Y K KVLS K TT +KPY I+Q K+S S+ ELANFKCPSPK N++
Sbjct: 6 MKMMQTKRRHVDYHVLKPKVLSTKVTTAMKPYNIYQRKESKSDRELANFKCPSPKKNNIE 65
Query: 61 LSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV--APKI 120
L +K NT IVVLSPR+A RV +LKAKFGS ILKAQQKL NSNN+SN YEY+VV PK
Sbjct: 66 LLPVKPNTTIVVLSPRRAARVEVLKAKFGSTILKAQQKLQNSNNDSNKYEYVVVGATPKT 125
Query: 121 CSI-QEQRRASREALDKIKPDFDFNENMDSMREFDKLLK 156
CSI QEQ+RASREALDKI P FDFNEN+DSMREF+K+L+
Sbjct: 126 CSILQEQKRASREALDKINPVFDFNENLDSMREFEKILE 164
BLAST of PI0002482 vs. NCBI nr
Match:
KGN61401.2 (hypothetical protein Csa_006690, partial [Cucumis sativus])
HSP 1 Score: 196.8 bits (499), Expect = 1.4e-46
Identity = 110/159 (69.18%), Postives = 129/159 (81.13%), Query Frame = 0
Query: 1 MRIMQTKRRNMGYGSSKSKVLSNKATTIVKPYTIHQTKKSNSNSELANFKCPSPKNNSV- 60
M++MQTKRR + Y K KVLS K TT +KPY I+Q K+SNS+ ELANFKCPSPK N++
Sbjct: 6 MKMMQTKRRYVDYHVLKPKVLSTKVTTAMKPYNIYQRKESNSDRELANFKCPSPKKNNIE 65
Query: 61 LSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV--APKI 120
L IK NT IVVLSPR+A RV +LKAKFGS ILKAQQKL NSNN+SN YEY+VV PK
Sbjct: 66 LLPIKPNTTIVVLSPRRAARVEVLKAKFGSTILKAQQKLQNSNNDSNKYEYVVVGATPKA 125
Query: 121 CSI-QEQRRASREALDKIKPDFDFNENMDSMREFDKLLK 156
CSI QEQ+RASREALDKI P F+FNEN+DSMREF+K+L+
Sbjct: 126 CSILQEQKRASREALDKINPVFNFNENLDSMREFEKILE 164
BLAST of PI0002482 vs. NCBI nr
Match:
TYK19957.1 (hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa])
HSP 1 Score: 179.1 bits (453), Expect = 2.9e-41
Identity = 109/160 (68.12%), Postives = 125/160 (78.12%), Query Frame = 0
Query: 1 MRIMQTKRRNMGYGSSKSKVLSNKATTIV-KPYT-IHQTKKSNSNSELANFKCPSPKNNS 60
MR+MQ KRR + K KVLS K TT V + YT IHQTKKSNSN ELA F+ PS KNN+
Sbjct: 1 MRMMQAKRRYVNDRFPKRKVLSTKVTTTVGELYTAIHQTKKSNSNHELAKFESPSSKNNN 60
Query: 61 --VLSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV-AP 120
LS K T I+VLSPR+A RV MLK KFGS ILKAQQKL SN +SNIY+Y+VV AP
Sbjct: 61 SPTLSPKKTKTTIIVLSPRQAARVEMLKEKFGSTILKAQQKL--SNKDSNIYKYVVVEAP 120
Query: 121 KICSIQEQRRASREALDKIKPDFDFNENMDSMREFDKLLK 156
K+CSIQEQRRASRE+LDKIKP FDFNEN+DSMR+F++LLK
Sbjct: 121 KVCSIQEQRRASRESLDKIKPVFDFNENLDSMRDFEELLK 158
BLAST of PI0002482 vs. NCBI nr
Match:
KAA0064635.1 (hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa])
HSP 1 Score: 179.1 bits (453), Expect = 2.9e-41
Identity = 109/160 (68.12%), Postives = 125/160 (78.12%), Query Frame = 0
Query: 1 MRIMQTKRRNMGYGSSKSKVLSNKATTIV-KPYT-IHQTKKSNSNSELANFKCPSPKNN- 60
MR+MQ KRR + K KVLS K TT V + YT IHQTKKSNSN ELA F+ PS KNN
Sbjct: 1 MRMMQAKRRYVNDRFPKRKVLSTKVTTTVGELYTAIHQTKKSNSNHELAKFESPSSKNNN 60
Query: 61 -SVLSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV-AP 120
+ LS K T I+VLSPR+A RV MLK KFGS ILKAQQKL SN +SNIY+Y+VV AP
Sbjct: 61 STTLSPKKTKTTIIVLSPRQAARVEMLKEKFGSTILKAQQKL--SNKDSNIYKYVVVEAP 120
Query: 121 KICSIQEQRRASREALDKIKPDFDFNENMDSMREFDKLLK 156
K+CSIQEQRRASRE+LDKIKP FDFNEN+DSMR+F++LLK
Sbjct: 121 KVCSIQEQRRASRESLDKIKPVFDFNENLDSMRDFEELLK 158
BLAST of PI0002482 vs. NCBI nr
Match:
KAE8647903.1 (hypothetical protein Csa_000590, partial [Cucumis sativus])
HSP 1 Score: 162.2 bits (409), Expect = 3.7e-36
Identity = 95/140 (67.86%), Postives = 108/140 (77.14%), Query Frame = 0
Query: 1 MRIMQTKRRNMGYGSSKSKVLSNKATTIVKPYTIHQTKKSNSNSELANFKCPSPKNNSV- 60
M++MQTKRR + Y K KVLS K TT +KPY I+Q K+S S+ ELANFKCPSPK N++
Sbjct: 6 MKMMQTKRRYVDYHVLKPKVLSTKVTTAMKPYNIYQRKESKSDRELANFKCPSPKKNNIE 65
Query: 61 LSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV--APKI 120
L IK NT IVVLSPR+A RV +LKAKFGS ILKAQQKL NSNN+SN YEY VV PK
Sbjct: 66 LLPIKPNTTIVVLSPRRAARVEVLKAKFGSTILKAQQKLQNSNNDSNKYEYAVVGATPKT 125
Query: 121 CSI-QEQRRASREALDKIKP 137
SI QEQ+RASREALDKI P
Sbjct: 126 SSILQEQKRASREALDKINP 145
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VFH7 | 1.4e-41 | 68.13 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3D8Q3 | 1.4e-41 | 68.13 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0KMZ1 | 2.4e-41 | 65.61 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G164650 PE=4 SV=1 | [more] |
| A0A0A0KRB6 | 6.6e-39 | 74.60 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162640 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8647905.1 | 1.0e-46 | 68.55 | hypothetical protein Csa_000421, partial [Cucumis sativus] | [more] |
| KGN61401.2 | 1.4e-46 | 69.18 | hypothetical protein Csa_006690, partial [Cucumis sativus] | [more] |
| TYK19957.1 | 2.9e-41 | 68.13 | hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa] | [more] |
| KAA0064635.1 | 2.9e-41 | 68.13 | hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa] | [more] |
| KAE8647903.1 | 3.7e-36 | 67.86 | hypothetical protein Csa_000590, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
