PI0002482 (gene) Melon (PI 482460) v1

Overview


Name	PI0002482
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr02: 19311314 .. 19311781 (-)
RNA-Seq Expression	PI0002482
Synteny	PI0002482

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGATTATGCAAACAAAACGGAGAAATATGGGTTATGGCTCTTCAAAATCCAAAGTTCTTTCGAACAAAGCTACAACCATTGTGAAACCATATACCATTCATCAAACAAAGAAATCCAATAGTAATTCTGAGTTAGCAAACTTCAAATGTCCATCACCAAAGAACAATAGTGTGTTGTCGTCCATAAAGGCAAACACTAATATTGTAGTATTGTCACCAAGAAAAGCTACTCGAGTTCGAATGCTAAAAGCCAAATTTGGCAGTATCATTTTGAAGGCTCAACAAAAACTTTCTAATTCCAATAATAATTCTAATATCTACGAATATATTGTTGTGGCTCCAAAGATATGCTCCATACAAGAGCAAAGACGAGCTTCAAGAGAAGCTCTTGACAAGATCAAGCCAGACTTTGATTTCAATGAGAATATGGATTCCATGAGAGAATTCGACAAATTATTGAAGTAA

mRNA sequence

ATGAGGATTATGCAAACAAAACGGAGAAATATGGGTTATGGCTCTTCAAAATCCAAAGTTCTTTCGAACAAAGCTACAACCATTGTGAAACCATATACCATTCATCAAACAAAGAAATCCAATAGTAATTCTGAGTTAGCAAACTTCAAATGTCCATCACCAAAGAACAATAGTGTGTTGTCGTCCATAAAGGCAAACACTAATATTGTAGTATTGTCACCAAGAAAAGCTACTCGAGTTCGAATGCTAAAAGCCAAATTTGGCAGTATCATTTTGAAGGCTCAACAAAAACTTTCTAATTCCAATAATAATTCTAATATCTACGAATATATTGTTGTGGCTCCAAAGATATGCTCCATACAAGAGCAAAGACGAGCTTCAAGAGAAGCTCTTGACAAGATCAAGCCAGACTTTGATTTCAATGAGAATATGGATTCCATGAGAGAATTCGACAAATTATTGAAGTAA

Coding sequence (CDS)

ATGAGGATTATGCAAACAAAACGGAGAAATATGGGTTATGGCTCTTCAAAATCCAAAGTTCTTTCGAACAAAGCTACAACCATTGTGAAACCATATACCATTCATCAAACAAAGAAATCCAATAGTAATTCTGAGTTAGCAAACTTCAAATGTCCATCACCAAAGAACAATAGTGTGTTGTCGTCCATAAAGGCAAACACTAATATTGTAGTATTGTCACCAAGAAAAGCTACTCGAGTTCGAATGCTAAAAGCCAAATTTGGCAGTATCATTTTGAAGGCTCAACAAAAACTTTCTAATTCCAATAATAATTCTAATATCTACGAATATATTGTTGTGGCTCCAAAGATATGCTCCATACAAGAGCAAAGACGAGCTTCAAGAGAAGCTCTTGACAAGATCAAGCCAGACTTTGATTTCAATGAGAATATGGATTCCATGAGAGAATTCGACAAATTATTGAAGTAA

Protein sequence

MRIMQTKRRNMGYGSSKSKVLSNKATTIVKPYTIHQTKKSNSNSELANFKCPSPKNNSVLSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVVAPKICSIQEQRRASREALDKIKPDFDFNENMDSMREFDKLLK

Homology

[Close]

BLAST of PI0002482 vs. ExPASy TrEMBL
Match: A0A5A7VFH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003590 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41
Identity = 109/160 (68.12%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 1   MRIMQTKRRNMGYGSSKSKVLSNKATTIV-KPYT-IHQTKKSNSNSELANFKCPSPKNN- 60
           MR+MQ KRR +     K KVLS K TT V + YT IHQTKKSNSN ELA F+ PS KNN 
Sbjct: 1   MRMMQAKRRYVNDRFPKRKVLSTKVTTTVGELYTAIHQTKKSNSNHELAKFESPSSKNNN 60

Query: 61  -SVLSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV-AP 120
            + LS  K  T I+VLSPR+A RV MLK KFGS ILKAQQKL  SN +SNIY+Y+VV AP
Sbjct: 61  STTLSPKKTKTTIIVLSPRQAARVEMLKEKFGSTILKAQQKL--SNKDSNIYKYVVVEAP 120

Query: 121 KICSIQEQRRASREALDKIKPDFDFNENMDSMREFDKLLK 156
           K+CSIQEQRRASRE+LDKIKP FDFNEN+DSMR+F++LLK
Sbjct: 121 KVCSIQEQRRASRESLDKIKPVFDFNENLDSMRDFEELLK 158

[Close]

BLAST of PI0002482 vs. ExPASy TrEMBL
Match: A0A5D3D8Q3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00700 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41
Identity = 109/160 (68.12%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 1   MRIMQTKRRNMGYGSSKSKVLSNKATTIV-KPYT-IHQTKKSNSNSELANFKCPSPKNNS 60
           MR+MQ KRR +     K KVLS K TT V + YT IHQTKKSNSN ELA F+ PS KNN+
Sbjct: 1   MRMMQAKRRYVNDRFPKRKVLSTKVTTTVGELYTAIHQTKKSNSNHELAKFESPSSKNNN 60

Query: 61  --VLSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV-AP 120
              LS  K  T I+VLSPR+A RV MLK KFGS ILKAQQKL  SN +SNIY+Y+VV AP
Sbjct: 61  SPTLSPKKTKTTIIVLSPRQAARVEMLKEKFGSTILKAQQKL--SNKDSNIYKYVVVEAP 120

Query: 121 KICSIQEQRRASREALDKIKPDFDFNENMDSMREFDKLLK 156
           K+CSIQEQRRASRE+LDKIKP FDFNEN+DSMR+F++LLK
Sbjct: 121 KVCSIQEQRRASRESLDKIKPVFDFNENLDSMRDFEELLK 158

[Close]

BLAST of PI0002482 vs. ExPASy TrEMBL
Match: A0A0A0KMZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G164650 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.4e-41
Identity = 103/157 (65.61%), Postives = 120/157 (76.43%), Query Frame = 0


Query: 1   MRIMQTKRRNMGYGSSKSKVLSNKATTIVKPYTIHQTKKSNSNSELANFKCPSPKNNSV- 60
           MR+MQTKRR + Y   K KVLS K T  +KPY IHQ K+SN + EL NFKC SPK N++ 
Sbjct: 1   MRMMQTKRRYIDYHMLKPKVLSTKVTKTMKPYNIHQRKESNGDHELTNFKCLSPKKNNIE 60

Query: 61  LSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV--APKI 120
           L  IK NT IVVLSPR+A RV +LKAKFGS I KAQQKL  SNN+SN YEY+V+   PK 
Sbjct: 61  LLPIKPNTTIVVLSPRRAARVEVLKAKFGSTIWKAQQKLQKSNNDSNKYEYVVIGATPKT 120

Query: 121 CSI-QEQRRASREALDK-IKPDFDFNENMDSMREFDK 153
           CSI QEQ+RASREALDK I P FDFNEN+DSM+EF++
Sbjct: 121 CSILQEQKRASREALDKMINPVFDFNENLDSMKEFER 157

[Close]

BLAST of PI0002482 vs. ExPASy TrEMBL
Match: A0A0A0KRB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162640 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 6.6e-39
Identity = 94/126 (74.60%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 31  PYTIHQTKKSNSNSELANFKCPSPKNNSVLSSIKANTNIVVLSPRKATRVRMLKAKFGSI 90
           PY IHQ K+SNS+ +LANFKCPSPKNN  +  IK NT IVVLSPR+A RV +LKAKFGS 
Sbjct: 3   PYNIHQIKESNSDHDLANFKCPSPKNNIAVLPIKPNT-IVVLSPRRAARVEVLKAKFGST 62

Query: 91  ILKAQQKLSNSNNNSNIYEYIVVA-PKICSIQEQRRASREALDKIKPDFDFNENMDSMRE 150
           ILKAQQKL NSNN+SN +EYIV A P ICSIQEQR+A REALDKI P FDFNEN+DSMRE
Sbjct: 63  ILKAQQKLHNSNNDSNKHEYIVGATPNICSIQEQRQALREALDKINPAFDFNENLDSMRE 122

Query: 151 FDKLLK 156
           F KLL+
Sbjct: 123 FAKLLE 127

[Close]

BLAST of PI0002482 vs. NCBI nr
Match: KAE8647905.1 (hypothetical protein Csa_000421, partial [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 1.0e-46
Identity = 109/159 (68.55%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 1   MRIMQTKRRNMGYGSSKSKVLSNKATTIVKPYTIHQTKKSNSNSELANFKCPSPKNNSV- 60
           M++MQTKRR++ Y   K KVLS K TT +KPY I+Q K+S S+ ELANFKCPSPK N++ 
Sbjct: 6   MKMMQTKRRHVDYHVLKPKVLSTKVTTAMKPYNIYQRKESKSDRELANFKCPSPKKNNIE 65

Query: 61  LSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV--APKI 120
           L  +K NT IVVLSPR+A RV +LKAKFGS ILKAQQKL NSNN+SN YEY+VV   PK 
Sbjct: 66  LLPVKPNTTIVVLSPRRAARVEVLKAKFGSTILKAQQKLQNSNNDSNKYEYVVVGATPKT 125

Query: 121 CSI-QEQRRASREALDKIKPDFDFNENMDSMREFDKLLK 156
           CSI QEQ+RASREALDKI P FDFNEN+DSMREF+K+L+
Sbjct: 126 CSILQEQKRASREALDKINPVFDFNENLDSMREFEKILE 164

[Close]

BLAST of PI0002482 vs. NCBI nr
Match: KGN61401.2 (hypothetical protein Csa_006690, partial [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-46
Identity = 110/159 (69.18%), Postives = 129/159 (81.13%), Query Frame = 0


Query: 1   MRIMQTKRRNMGYGSSKSKVLSNKATTIVKPYTIHQTKKSNSNSELANFKCPSPKNNSV- 60
           M++MQTKRR + Y   K KVLS K TT +KPY I+Q K+SNS+ ELANFKCPSPK N++ 
Sbjct: 6   MKMMQTKRRYVDYHVLKPKVLSTKVTTAMKPYNIYQRKESNSDRELANFKCPSPKKNNIE 65

Query: 61  LSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV--APKI 120
           L  IK NT IVVLSPR+A RV +LKAKFGS ILKAQQKL NSNN+SN YEY+VV   PK 
Sbjct: 66  LLPIKPNTTIVVLSPRRAARVEVLKAKFGSTILKAQQKLQNSNNDSNKYEYVVVGATPKA 125

Query: 121 CSI-QEQRRASREALDKIKPDFDFNENMDSMREFDKLLK 156
           CSI QEQ+RASREALDKI P F+FNEN+DSMREF+K+L+
Sbjct: 126 CSILQEQKRASREALDKINPVFNFNENLDSMREFEKILE 164

[Close]

BLAST of PI0002482 vs. NCBI nr
Match: TYK19957.1 (hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 2.9e-41
Identity = 109/160 (68.12%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 1   MRIMQTKRRNMGYGSSKSKVLSNKATTIV-KPYT-IHQTKKSNSNSELANFKCPSPKNNS 60
           MR+MQ KRR +     K KVLS K TT V + YT IHQTKKSNSN ELA F+ PS KNN+
Sbjct: 1   MRMMQAKRRYVNDRFPKRKVLSTKVTTTVGELYTAIHQTKKSNSNHELAKFESPSSKNNN 60

Query: 61  --VLSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV-AP 120
              LS  K  T I+VLSPR+A RV MLK KFGS ILKAQQKL  SN +SNIY+Y+VV AP
Sbjct: 61  SPTLSPKKTKTTIIVLSPRQAARVEMLKEKFGSTILKAQQKL--SNKDSNIYKYVVVEAP 120

Query: 121 KICSIQEQRRASREALDKIKPDFDFNENMDSMREFDKLLK 156
           K+CSIQEQRRASRE+LDKIKP FDFNEN+DSMR+F++LLK
Sbjct: 121 KVCSIQEQRRASRESLDKIKPVFDFNENLDSMRDFEELLK 158

[Close]

BLAST of PI0002482 vs. NCBI nr
Match: KAA0064635.1 (hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 2.9e-41
Identity = 109/160 (68.12%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 1   MRIMQTKRRNMGYGSSKSKVLSNKATTIV-KPYT-IHQTKKSNSNSELANFKCPSPKNN- 60
           MR+MQ KRR +     K KVLS K TT V + YT IHQTKKSNSN ELA F+ PS KNN 
Sbjct: 1   MRMMQAKRRYVNDRFPKRKVLSTKVTTTVGELYTAIHQTKKSNSNHELAKFESPSSKNNN 60

Query: 61  -SVLSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV-AP 120
            + LS  K  T I+VLSPR+A RV MLK KFGS ILKAQQKL  SN +SNIY+Y+VV AP
Sbjct: 61  STTLSPKKTKTTIIVLSPRQAARVEMLKEKFGSTILKAQQKL--SNKDSNIYKYVVVEAP 120

Query: 121 KICSIQEQRRASREALDKIKPDFDFNENMDSMREFDKLLK 156
           K+CSIQEQRRASRE+LDKIKP FDFNEN+DSMR+F++LLK
Sbjct: 121 KVCSIQEQRRASRESLDKIKPVFDFNENLDSMRDFEELLK 158

[Close]

BLAST of PI0002482 vs. NCBI nr
Match: KAE8647903.1 (hypothetical protein Csa_000590, partial [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 3.7e-36
Identity = 95/140 (67.86%), Postives = 108/140 (77.14%), Query Frame = 0


Query: 1   MRIMQTKRRNMGYGSSKSKVLSNKATTIVKPYTIHQTKKSNSNSELANFKCPSPKNNSV- 60
           M++MQTKRR + Y   K KVLS K TT +KPY I+Q K+S S+ ELANFKCPSPK N++ 
Sbjct: 6   MKMMQTKRRYVDYHVLKPKVLSTKVTTAMKPYNIYQRKESKSDRELANFKCPSPKKNNIE 65

Query: 61  LSSIKANTNIVVLSPRKATRVRMLKAKFGSIILKAQQKLSNSNNNSNIYEYIVV--APKI 120
           L  IK NT IVVLSPR+A RV +LKAKFGS ILKAQQKL NSNN+SN YEY VV   PK 
Sbjct: 66  LLPIKPNTTIVVLSPRRAARVEVLKAKFGSTILKAQQKLQNSNNDSNKYEYAVVGATPKT 125

Query: 121 CSI-QEQRRASREALDKIKP 137
            SI QEQ+RASREALDKI P
Sbjct: 126 SSILQEQKRASREALDKINP 145

The following BLAST results are available for this feature:

BLAST of PI0002482 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002482 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VFH7	1.4e-41	68.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D8Q3	1.4e-41	68.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KMZ1	2.4e-41	65.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G164650 PE=4 SV=1	[more]
A0A0A0KRB6	6.6e-39	74.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162640 PE=4 SV=1	[more]

BLAST of PI0002482 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647905.1	1.0e-46	68.55	hypothetical protein Csa_000421, partial [Cucumis sativus]	[more]
KGN61401.2	1.4e-46	69.18	hypothetical protein Csa_006690, partial [Cucumis sativus]	[more]
TYK19957.1	2.9e-41	68.13	hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa]	[more]
KAA0064635.1	2.9e-41	68.13	hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa]	[more]
KAE8647903.1	3.7e-36	67.86	hypothetical protein Csa_000590, partial [Cucumis sativus]	[more]

BLAST of PI0002482 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002482.1	PI0002482.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045332	phospholipid translocation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0140326	ATPase-coupled intramembrane lipid transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000287	magnesium ion binding