Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTTAACTCAACCCGATAGCGATGATGAGGAGAACGAGGAAGAAGCTCTTCCTTTGACAAAGAGACCCGACTCAAAGATTGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGCTGCTCGTACTAGACAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCAGAGGAAAATGTGGTCGGATTTGATACCAACATGCTGA
mRNA sequence
ATGGACTTAACTCAACCCGATAGCGATGATGAGGAGAACGAGGAAGAAGCTCTTCCTTTGACAAAGAGACCCGACTCAAAGATTGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGCTGCTCGTACTAGACAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCAGAGGAAAATGTGGTCGGATTTGATACCAACATGCTGA
Coding sequence (CDS)
ATGGACTTAACTCAACCCGATAGCGATGATGAGGAGAACGAGGAAGAAGCTCTTCCTTTGACAAAGAGACCCGACTCAAAGATTGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGCTGCTCGTACTAGACAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCAGAGGAAAATGTGGTCGGATTTGATACCAACATGCTGA
Protein sequence
MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLDCEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFVDYPLKRFNLSQRKMWSDLIPTC
Homology
BLAST of PI0001992 vs. ExPASy TrEMBL
Match:
A0A5A7UMZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00100 PE=4 SV=1)
HSP 1 Score: 123.6 bits (309), Expect = 5.6e-25
Identity = 71/114 (62.28%), Postives = 76/114 (66.67%), Query Frame = 0
Query: 1 MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MD+TQP DDEENE E L L EREIRETS PDPLHH+N+D
Sbjct: 1 MDVTQPGIDDEENEGEVLHLK-------------------EREIRETSTLPDPLHHSNVD 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQ-FVDYPLKRFNLSQRK 114
CEE ATP PSSHVN IIHPQSKRPQNRPLDS Q FV+YPLKRFNLS +K
Sbjct: 61 CEEVATPFPSSHVNAIIHPQSKRPQNRPLDSLLVMLDQHFVNYPLKRFNLSWKK 95
BLAST of PI0001992 vs. ExPASy TrEMBL
Match:
A0A0A0LMZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G093830 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 7.8e-19
Identity = 50/60 (83.33%), Postives = 53/60 (88.33%), Query Frame = 0
Query: 41 EREIRETSPSPDPLHHNNLDCEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 100
EREIRETSP DPLHHNN+D EEA TPLPS+HVN +IHPQSKRPQNRPLDSPAARTR V
Sbjct: 9 EREIRETSPYSDPLHHNNMDFEEATTPLPSTHVNIMIHPQSKRPQNRPLDSPAARTRSAV 68
BLAST of PI0001992 vs. ExPASy TrEMBL
Match:
A0A5A7SN98 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00930 PE=4 SV=1)
HSP 1 Score: 96.7 bits (239), Expect = 7.3e-17
Identity = 56/100 (56.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query: 1 MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP SDDE+N+ EAL L EREIRE SP PDPLH +N+D
Sbjct: 1 MDLTQPSSDDEKNKGEALHLR-------------------EREIREISPLPDPLHQSNVD 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
CEEA TP SSHVN IHPQ++RPQNR L+S RTR V
Sbjct: 61 CEEATTPSLSSHVNATIHPQARRPQNRSLNSLVGRTRSVV 81
BLAST of PI0001992 vs. ExPASy TrEMBL
Match:
A0A5D3D2Q7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1327G00100 PE=4 SV=1)
HSP 1 Score: 96.7 bits (239), Expect = 7.3e-17
Identity = 56/100 (56.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query: 1 MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP SDDE+N+ EAL L EREIRE SP PDPLH +N+D
Sbjct: 1 MDLTQPSSDDEKNKGEALHLR-------------------EREIREISPLPDPLHQSNVD 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
CEEA TP SSHVN IHPQ++RPQNR L+S RTR V
Sbjct: 61 CEEATTPSLSSHVNATIHPQARRPQNRSLNSLVGRTRSVV 81
BLAST of PI0001992 vs. ExPASy TrEMBL
Match:
A0A5A7UNU1 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00350 PE=4 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 9.5e-17
Identity = 59/100 (59.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query: 1 MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEENE EAL L E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPL------ 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
EEA TPLPSSHVN IHPQS+RP NRPLDSPA RTR V
Sbjct: 61 LEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAV 75
BLAST of PI0001992 vs. NCBI nr
Match:
KAA0055646.1 (hypothetical protein E6C27_scaffold181G00110 [Cucumis melo var. makuwa] >TYK09900.1 hypothetical protein E5676_scaffold16G00100 [Cucumis melo var. makuwa])
HSP 1 Score: 123.6 bits (309), Expect = 1.1e-24
Identity = 71/114 (62.28%), Postives = 76/114 (66.67%), Query Frame = 0
Query: 1 MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MD+TQP DDEENE E L L EREIRETS PDPLHH+N+D
Sbjct: 1 MDVTQPGIDDEENEGEVLHLK-------------------EREIRETSTLPDPLHHSNVD 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQ-FVDYPLKRFNLSQRK 114
CEE ATP PSSHVN IIHPQSKRPQNRPLDS Q FV+YPLKRFNLS +K
Sbjct: 61 CEEVATPFPSSHVNAIIHPQSKRPQNRPLDSLLVMLDQHFVNYPLKRFNLSWKK 95
BLAST of PI0001992 vs. NCBI nr
Match:
TYK17066.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 96.7 bits (239), Expect = 1.5e-16
Identity = 56/100 (56.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query: 1 MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP SDDE+N+ EAL L EREIRE SP PDPLH +N+D
Sbjct: 1 MDLTQPSSDDEKNKGEALHLR-------------------EREIREISPLPDPLHQSNVD 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
CEEA TP SSHVN IHPQ++RPQNR L+S RTR V
Sbjct: 61 CEEATTPSLSSHVNATIHPQARRPQNRSLNSLVGRTRSVV 81
BLAST of PI0001992 vs. NCBI nr
Match:
KAA0032260.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 96.7 bits (239), Expect = 1.5e-16
Identity = 56/100 (56.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query: 1 MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP SDDE+N+ EAL L EREIRE SP PDPLH +N+D
Sbjct: 1 MDLTQPSSDDEKNKGEALHLR-------------------EREIREISPLPDPLHQSNVD 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
CEEA TP SSHVN IHPQ++RPQNR L+S RTR V
Sbjct: 61 CEEATTPSLSSHVNATIHPQARRPQNRSLNSLVGRTRSVV 81
BLAST of PI0001992 vs. NCBI nr
Match:
KAA0056267.1 (uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa])
HSP 1 Score: 96.3 bits (238), Expect = 2.0e-16
Identity = 59/100 (59.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query: 1 MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEENE EAL L E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPL------ 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
EEA TPLPSSHVN IHPQS+RP NRPLDSPA RTR V
Sbjct: 61 LEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAV 75
BLAST of PI0001992 vs. NCBI nr
Match:
KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 95.5 bits (236), Expect = 3.3e-16
Identity = 59/100 (59.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query: 1 MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEENE EAL L E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
EEA TPLPSSHVN IHPQS+RP NRPLDSPA RTR V
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAV 75
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UMZ2 | 5.6e-25 | 62.28 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0LMZ0 | 7.8e-19 | 83.33 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G093830 PE=4 SV=1 | [more] |
A0A5A7SN98 | 7.3e-17 | 56.00 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00... | [more] |
A0A5D3D2Q7 | 7.3e-17 | 56.00 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1327G0... | [more] |
A0A5A7UNU1 | 9.5e-17 | 59.00 | Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
Match Name | E-value | Identity | Description | |
KAA0055646.1 | 1.1e-24 | 62.28 | hypothetical protein E6C27_scaffold181G00110 [Cucumis melo var. makuwa] >TYK0990... | [more] |
TYK17066.1 | 1.5e-16 | 56.00 | Plant transposase [Cucumis melo var. makuwa] | [more] |
KAA0032260.1 | 1.5e-16 | 56.00 | Plant transposase [Cucumis melo var. makuwa] | [more] |
KAA0056267.1 | 2.0e-16 | 59.00 | uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa] | [more] |
KAA0032201.1 | 3.3e-16 | 59.00 | Plant transposase [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |