PI0001992 (gene) Melon (PI 482460) v1

Overview


Name	PI0001992
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Plant transposase
Location	chr04: 14552422 .. 14552790 (+)
RNA-Seq Expression	PI0001992
Synteny	PI0001992

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTAACTCAACCCGATAGCGATGATGAGGAGAACGAGGAAGAAGCTCTTCCTTTGACAAAGAGACCCGACTCAAAGATTGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGCTGCTCGTACTAGACAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCAGAGGAAAATGTGGTCGGATTTGATACCAACATGCTGA

mRNA sequence

ATGGACTTAACTCAACCCGATAGCGATGATGAGGAGAACGAGGAAGAAGCTCTTCCTTTGACAAAGAGACCCGACTCAAAGATTGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGCTGCTCGTACTAGACAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCAGAGGAAAATGTGGTCGGATTTGATACCAACATGCTGA

Coding sequence (CDS)

ATGGACTTAACTCAACCCGATAGCGATGATGAGGAGAACGAGGAAGAAGCTCTTCCTTTGACAAAGAGACCCGACTCAAAGATTGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCACAATAACTTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGCTGCTCGTACTAGACAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCAGAGGAAAATGTGGTCGGATTTGATACCAACATGCTGA

Protein sequence

MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLDCEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFVDYPLKRFNLSQRKMWSDLIPTC

Homology

[Close]

BLAST of PI0001992 vs. ExPASy TrEMBL
Match: A0A5A7UMZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00100 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.6e-25
Identity = 71/114 (62.28%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 1   MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
           MD+TQP  DDEENE E L L                    EREIRETS  PDPLHH+N+D
Sbjct: 1   MDVTQPGIDDEENEGEVLHLK-------------------EREIRETSTLPDPLHHSNVD 60

Query: 61  CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQ-FVDYPLKRFNLSQRK 114
           CEE ATP PSSHVN IIHPQSKRPQNRPLDS      Q FV+YPLKRFNLS +K
Sbjct: 61  CEEVATPFPSSHVNAIIHPQSKRPQNRPLDSLLVMLDQHFVNYPLKRFNLSWKK 95

[Close]

BLAST of PI0001992 vs. ExPASy TrEMBL
Match: A0A0A0LMZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G093830 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 7.8e-19
Identity = 50/60 (83.33%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 41  EREIRETSPSPDPLHHNNLDCEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 100
           EREIRETSP  DPLHHNN+D EEA TPLPS+HVN +IHPQSKRPQNRPLDSPAARTR  V
Sbjct: 9   EREIRETSPYSDPLHHNNMDFEEATTPLPSTHVNIMIHPQSKRPQNRPLDSPAARTRSAV 68

[Close]

BLAST of PI0001992 vs. ExPASy TrEMBL
Match: A0A5A7SN98 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00930 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.3e-17
Identity = 56/100 (56.00%), Postives = 63/100 (63.00%), Query Frame = 0


Query: 1   MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
           MDLTQP SDDE+N+ EAL L                    EREIRE SP PDPLH +N+D
Sbjct: 1   MDLTQPSSDDEKNKGEALHLR-------------------EREIREISPLPDPLHQSNVD 60

Query: 61  CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
           CEEA TP  SSHVN  IHPQ++RPQNR L+S   RTR  V
Sbjct: 61  CEEATTPSLSSHVNATIHPQARRPQNRSLNSLVGRTRSVV 81

[Close]

BLAST of PI0001992 vs. ExPASy TrEMBL
Match: A0A5D3D2Q7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1327G00100 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.3e-17
Identity = 56/100 (56.00%), Postives = 63/100 (63.00%), Query Frame = 0


Query: 1   MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
           MDLTQP SDDE+N+ EAL L                    EREIRE SP PDPLH +N+D
Sbjct: 1   MDLTQPSSDDEKNKGEALHLR-------------------EREIREISPLPDPLHQSNVD 60

Query: 61  CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
           CEEA TP  SSHVN  IHPQ++RPQNR L+S   RTR  V
Sbjct: 61  CEEATTPSLSSHVNATIHPQARRPQNRSLNSLVGRTRSVV 81

[Close]

BLAST of PI0001992 vs. ExPASy TrEMBL
Match: A0A5A7UNU1 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00350 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 9.5e-17
Identity = 59/100 (59.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 1   MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
           MDLTQP +DDEENE EAL L                    E+EIRETSP PDPL      
Sbjct: 1   MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPL------ 60

Query: 61  CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
            EEA TPLPSSHVN  IHPQS+RP NRPLDSPA RTR  V
Sbjct: 61  LEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAV 75

[Close]

BLAST of PI0001992 vs. NCBI nr
Match: KAA0055646.1 (hypothetical protein E6C27_scaffold181G00110 [Cucumis melo var. makuwa] >TYK09900.1 hypothetical protein E5676_scaffold16G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-24
Identity = 71/114 (62.28%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 1   MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
           MD+TQP  DDEENE E L L                    EREIRETS  PDPLHH+N+D
Sbjct: 1   MDVTQPGIDDEENEGEVLHLK-------------------EREIRETSTLPDPLHHSNVD 60

Query: 61  CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQ-FVDYPLKRFNLSQRK 114
           CEE ATP PSSHVN IIHPQSKRPQNRPLDS      Q FV+YPLKRFNLS +K
Sbjct: 61  CEEVATPFPSSHVNAIIHPQSKRPQNRPLDSLLVMLDQHFVNYPLKRFNLSWKK 95

[Close]

BLAST of PI0001992 vs. NCBI nr
Match: TYK17066.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-16
Identity = 56/100 (56.00%), Postives = 63/100 (63.00%), Query Frame = 0


Query: 1   MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
           MDLTQP SDDE+N+ EAL L                    EREIRE SP PDPLH +N+D
Sbjct: 1   MDLTQPSSDDEKNKGEALHLR-------------------EREIREISPLPDPLHQSNVD 60

Query: 61  CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
           CEEA TP  SSHVN  IHPQ++RPQNR L+S   RTR  V
Sbjct: 61  CEEATTPSLSSHVNATIHPQARRPQNRSLNSLVGRTRSVV 81

[Close]

BLAST of PI0001992 vs. NCBI nr
Match: KAA0032260.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-16
Identity = 56/100 (56.00%), Postives = 63/100 (63.00%), Query Frame = 0


Query: 1   MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
           MDLTQP SDDE+N+ EAL L                    EREIRE SP PDPLH +N+D
Sbjct: 1   MDLTQPSSDDEKNKGEALHLR-------------------EREIREISPLPDPLHQSNVD 60

Query: 61  CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
           CEEA TP  SSHVN  IHPQ++RPQNR L+S   RTR  V
Sbjct: 61  CEEATTPSLSSHVNATIHPQARRPQNRSLNSLVGRTRSVV 81

[Close]

BLAST of PI0001992 vs. NCBI nr
Match: KAA0056267.1 (uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-16
Identity = 59/100 (59.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 1   MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
           MDLTQP +DDEENE EAL L                    E+EIRETSP PDPL      
Sbjct: 1   MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPL------ 60

Query: 61  CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
            EEA TPLPSSHVN  IHPQS+RP NRPLDSPA RTR  V
Sbjct: 61  LEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAV 75

[Close]

BLAST of PI0001992 vs. NCBI nr
Match: KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 3.3e-16
Identity = 59/100 (59.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 1   MDLTQPDSDDEENEEEALPLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
           MDLTQP +DDEENE EAL L                    E+EIRETSP PDPL      
Sbjct: 1   MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60

Query: 61  CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAARTRQFV 101
            EEA TPLPSSHVN  IHPQS+RP NRPLDSPA RTR  V
Sbjct: 61  -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAV 75

The following BLAST results are available for this feature:

BLAST of PI0001992 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001992 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMZ2	5.6e-25	62.28	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LMZ0	7.8e-19	83.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G093830 PE=4 SV=1	[more]
A0A5A7SN98	7.3e-17	56.00	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00...	[more]
A0A5D3D2Q7	7.3e-17	56.00	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1327G0...	[more]
A0A5A7UNU1	9.5e-17	59.00	Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of PI0001992 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055646.1	1.1e-24	62.28	hypothetical protein E6C27_scaffold181G00110 [Cucumis melo var. makuwa] >TYK0990...	[more]
TYK17066.1	1.5e-16	56.00	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0032260.1	1.5e-16	56.00	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0056267.1	2.0e-16	59.00	uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa]	[more]
KAA0032201.1	3.3e-16	59.00	Plant transposase [Cucumis melo var. makuwa]	[more]

BLAST of PI0001992 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001992.1	PI0001992.1	mRNA