PI0001197 (gene) Melon (PI 482460) v1

Overview


Name	PI0001197
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon gag protein
Location	chr09: 14263557 .. 14264518 (+)
RNA-Seq Expression	PI0001197
Synteny	PI0001197

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATTCGTTAAAGTTGCAAAGTGTGGGGTGTGCGGTCTAGTTGGACATCCAAATGACAAATGTCCAGACTTAATAGAAGAAGCAAAAGTCATTCGAAATTACGATCCTCAAAGCAATGCTTACAATGCCGGTTGGAAAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTGCAAACAATCAAGGTACCAATTTAGAAGATCTAGTAAAAGCTCTAGCAACTAATACCCTCTCTTTCCAACAAGAAATGAAGCAACAATTTGTCATCTCACAAACGCAATAAGTAAGTTAGAAGGAAAAGGTAAACTTCCGGCTCAGCCAGAATATGCAAATGTAAGTGCCATATCACTTAGAAGCGGAAAAATTCTTGAAACCCCTTCAAGAGAAGAAAAGGTAACTTCCACCCCTATCCTTCTCAATAACAATGAAGAGACCAAGGAAAAAAAATTAGAAACAAATGTTTTACCATCCAGCTCCAATAAAGGTAAATCTCATATTCTTGATTATACTCCATATATTCCTAAAGCTTCTTTTCCTTCCAAGTTAGCTCCAAAGAAAAAGGAAGCATCTAAGGAAGAAGAACTTTTGGAAATCTTCAAAAAGGTGCAAATCAATCTACCTTCACGACAAAGCCAATCCAAGATCGCATGGCTCATCGCAATCTGCCTTCACCGCAAGGCATTGCCTTCTGACTTGAGCCTCGCGAAGTACTTCATTCTGCAGAAGTATACCTTTATCTTGCCGCATATACATGCTCACTCACCAGCTCGCACATACTCAAGCTCGCAACCTTCACAGCAATCCATCAGCTCGCCAAGCTTTAGCTCGCATGCAGTCTGCATAACCGCCAAGCCCATAAGGCCCAAGGCCCAAGCCCATTGTAACAAAATAACCGCCAAATAG

mRNA sequence

ATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATTCGTTAAAGTTGCAAAGTGTGGGGTGTGCGGTCTAGTTGGACATCCAAATGACAAATGTCCAGACTTAATAGAAGAAGCAAAAGTCATTCGAAATTACGATCCTCAAAGCAATGCTTACAATGCCGGTTGGAAAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTGCAAACAATCAAGGAAAAGGTAAACTTCCGGCTCAGCCAGAATATGCAAATGTAAGTGCCATATCACTTAGAAGCGGAAAAATTCTTGAAACCCCTTCAAGAGAAGAAAAGGTAACTTCCACCCCTATCCTTCTCAATAACAATGAAGAGACCAAGGAAAAAAAATTAGAAACAAATGTTTTACCATCCAGCTCCAATAAAGGTAAATCTCATATTCTTGATTATACTCCATATATTCCTAAAGCTTCTTTTCCTTCCAAGTTAGCTCCAAAGAAAAAGGAAGCATCTAAGGAAGAAGAACTTTTGGAAATCTTCAAAAAGGTGCAAATCAATCTACCTTCACGACAAAGCCAATCCAAGATCGCATGGCTCATCGCAATCTGCCTTCACCGCAAGGCATTGCCTTCTGACTTGAGCCTCGCGAAGTACTTCATTCTGCAGAAGTATACCTTTATCTTGCCGCATATACATGCTCACTCACCAGCTCGCACATACTCAAGCTCGCAACCTTCACAGCAATCCATCAGCTCGCCAAGCTTTAGCTCGCATGCAGTCTGCATAACCGCCAAGCCCATAAGGCCCAAGGCCCAAGCCCATTGTAACAAAATAACCGCCAAATAG

Coding sequence (CDS)

ATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATTCGTTAAAGTTGCAAAGTGTGGGGTGTGCGGTCTAGTTGGACATCCAAATGACAAATGTCCAGACTTAATAGAAGAAGCAAAAGTCATTCGAAATTACGATCCTCAAAGCAATGCTTACAATGCCGGTTGGAAAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTGCAAACAATCAAGGAAAAGGTAAACTTCCGGCTCAGCCAGAATATGCAAATGTAAGTGCCATATCACTTAGAAGCGGAAAAATTCTTGAAACCCCTTCAAGAGAAGAAAAGGTAACTTCCACCCCTATCCTTCTCAATAACAATGAAGAGACCAAGGAAAAAAAATTAGAAACAAATGTTTTACCATCCAGCTCCAATAAAGGTAAATCTCATATTCTTGATTATACTCCATATATTCCTAAAGCTTCTTTTCCTTCCAAGTTAGCTCCAAAGAAAAAGGAAGCATCTAAGGAAGAAGAACTTTTGGAAATCTTCAAAAAGGTGCAAATCAATCTACCTTCACGACAAAGCCAATCCAAGATCGCATGGCTCATCGCAATCTGCCTTCACCGCAAGGCATTGCCTTCTGACTTGAGCCTCGCGAAGTACTTCATTCTGCAGAAGTATACCTTTATCTTGCCGCATATACATGCTCACTCACCAGCTCGCACATACTCAAGCTCGCAACCTTCACAGCAATCCATCAGCTCGCCAAGCTTTAGCTCGCATGCAGTCTGCATAACCGCCAAGCCCATAAGGCCCAAGGCCCAAGCCCATTGTAACAAAATAACCGCCAAATAG

Protein sequence

MTTLLTSFVQGGFVKVAKCGVCGLVGHPNDKCPDLIEEAKVIRNYDPQSNAYNAGWKDNPNLRWGNDNQRPSQATSSANNQGKGKLPAQPEYANVSAISLRSGKILETPSREEKVTSTPILLNNNEETKEKKLETNVLPSSSNKGKSHILDYTPYIPKASFPSKLAPKKKEASKEEELLEIFKKVQINLPSRQSQSKIAWLIAICLHRKALPSDLSLAKYFILQKYTFILPHIHAHSPARTYSSSQPSQQSISSPSFSSHAVCITAKPIRPKAQAHCNKITAK

Homology

[Close]

BLAST of PI0001197 vs. ExPASy TrEMBL
Match: A0A5A7SQH8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00200 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 3.3e-60
Identity = 129/227 (56.83%), Postives = 159/227 (70.04%), Query Frame = 0


Query: 1   MTTLLTSFVQGGFVKVAKCGVCGLVGHPNDKCPDLIEEAKVIRNYDPQSNAYNAGWKDNP 60
           MTTLLTSFVQG  +KV KCGVCGLVG+PNDKCP +IE+  ++R YDP  N YN GW+DNP
Sbjct: 165 MTTLLTSFVQGTPLKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWRDNP 224

Query: 61  NLRWGNDNQRPSQATSSANNQ------------------------------------GKG 120
           NLRWGNDNQ+ +QA  +++NQ                                    GKG
Sbjct: 225 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIALATNTLSFQQEMKQQMTQLTTVLSKMDGKG 284

Query: 121 KLPAQPEYANVSAISLRSGKILETP-SREEKVTSTPILLNNNEETKEKKLETNVLPSSSN 180
           KLPAQP++ NVSAISLRSGKIL+TP ++E+KVTS  + LN+  ++KE+K+ETN L S+S 
Sbjct: 285 KLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNPLSSNSK 344

Query: 181 KGKSHILDYTPYIPKASFPSKLAPKKKEASKEEELLEIFKKVQINLP 191
             KS + D+TPYIPK  FPS+LAPKKKE  K+EELLE+FKKVQINLP
Sbjct: 345 NDKSPLNDFTPYIPKPPFPSRLAPKKKETPKKEELLEMFKKVQINLP 391

[Close]

BLAST of PI0001197 vs. ExPASy TrEMBL
Match: A0A5D3CRR8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00610 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 7.2e-60
Identity = 127/228 (55.70%), Postives = 156/228 (68.42%), Query Frame = 0


Query: 1   MTTLLTSFVQGGFVKVAKCGVCGLVGHPNDKCPDLIEEAKVIRNYDPQSNAYNAGWKDNP 60
           MTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP++IE+  ++R YDP  N YN+GW+DNP
Sbjct: 142 MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNP 201

Query: 61  NLRWGNDNQRPSQATSSANNQ-------------------------------------GK 120
           NLRWGNDNQ+ +QA S+++NQ                                     GK
Sbjct: 202 NLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 261

Query: 121 GKLPAQPEYANVSAISLRSGKILETP-SREEKVTSTPILLNNNEETKEKKLETNVLPSSS 180
           GKL AQ  YANVSA+SLRSGKIL+TP ++E+K TS P+ LN   E KE+K+ETN  P +S
Sbjct: 262 GKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNS 321

Query: 181 NKGKSHILDYTPYIPKASFPSKLAPKKKEASKEEELLEIFKKVQINLP 191
              K  + D+TPYIPK  FPS+LAPKKKE  K+EE+LE+F+KVQINLP
Sbjct: 322 KNDKFPLNDFTPYIPKPPFPSRLAPKKKETPKKEEILEMFRKVQINLP 369

[Close]

BLAST of PI0001197 vs. ExPASy TrEMBL
Match: A0A5A7V668 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6213G00110 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 9.5e-60
Identity = 128/238 (53.78%), Postives = 160/238 (67.23%), Query Frame = 0


Query: 1   MTTLLTSFVQGGFVKVAKCGVCGLVGHPNDKCPDLIEEAKVIRNYDPQSNAYNAGWKDNP 60
           MTTLLTSFV G  +KV KCGVCGLVGH NDKCP++IE+  ++R YDP  N YN+GW+DNP
Sbjct: 137 MTTLLTSFVLGTPLKVTKCGVCGLVGHQNDKCPEVIEDVNIVRRYDPHGNTYNSGWRDNP 196

Query: 61  NLRWGNDNQRPSQATSSANNQ-------------------------------------GK 120
           NLRWGNDNQ+ + A S+++ Q                                     GK
Sbjct: 197 NLRWGNDNQKHTHAPSTSSTQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTTTSKMDGK 256

Query: 121 GKLPAQPEYANVSAISLRSGKILETP-SREEKVTSTPILLNNNEETKEKKLETNVLPSSS 180
           GKL AQP +ANVS ISLRSGKIL+TP S+E+KVTS P+ LN+  E+KE+K+ETN  PS+S
Sbjct: 257 GKLSAQPGHANVSVISLRSGKILDTPTSKEKKVTSKPLPLNSKNESKEEKVETNPSPSNS 316

Query: 181 NKGKSHILDYTPYIPKASFPSKLAPKKKEASKEEELLEIFKKVQINLPSRQSQSKIAW 201
              KS + D+TPYIPK  FPS+L PK+KE  KEEELLE+F+KVQINLP   +  ++ W
Sbjct: 317 KNDKSPLNDFTPYIPKPPFPSRLTPKEKETPKEEELLEMFRKVQINLPLLDAIQQVPW 374

[Close]

BLAST of PI0001197 vs. ExPASy TrEMBL
Match: A0A5D3CQR9 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1799G00090 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 9.5e-60
Identity = 128/238 (53.78%), Postives = 160/238 (67.23%), Query Frame = 0


Query: 1   MTTLLTSFVQGGFVKVAKCGVCGLVGHPNDKCPDLIEEAKVIRNYDPQSNAYNAGWKDNP 60
           MTTLLTSFV G  +KV KCGVCGLVGH NDKCP++IE+  ++R YDP  N YN+GW+DNP
Sbjct: 72  MTTLLTSFVLGTPLKVTKCGVCGLVGHQNDKCPEVIEDVNIVRRYDPHGNTYNSGWRDNP 131

Query: 61  NLRWGNDNQRPSQATSSANNQ-------------------------------------GK 120
           NLRWGNDNQ+ + A S+++ Q                                     GK
Sbjct: 132 NLRWGNDNQKHTHAPSTSSTQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTTTSKMDGK 191

Query: 121 GKLPAQPEYANVSAISLRSGKILETP-SREEKVTSTPILLNNNEETKEKKLETNVLPSSS 180
           GKL AQP +ANVS ISLRSGKIL+TP S+E+KVTS P+ LN+  E+KE+K+ETN  PS+S
Sbjct: 192 GKLSAQPGHANVSVISLRSGKILDTPTSKEKKVTSKPLPLNSKNESKEEKVETNPSPSNS 251

Query: 181 NKGKSHILDYTPYIPKASFPSKLAPKKKEASKEEELLEIFKKVQINLPSRQSQSKIAW 201
              KS + D+TPYIPK  FPS+L PK+KE  KEEELLE+F+KVQINLP   +  ++ W
Sbjct: 252 KNDKSPLNDFTPYIPKPPFPSRLTPKEKETPKEEELLEMFRKVQINLPLLDAIQQVPW 309

[Close]

BLAST of PI0001197 vs. ExPASy TrEMBL
Match: A0A1S3CQF6 (uncharacterized protein LOC103503078 OS=Cucumis melo OX=3656 GN=LOC103503078 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 9.5e-60
Identity = 128/238 (53.78%), Postives = 160/238 (67.23%), Query Frame = 0


Query: 1   MTTLLTSFVQGGFVKVAKCGVCGLVGHPNDKCPDLIEEAKVIRNYDPQSNAYNAGWKDNP 60
           MTTLLTSFV G  +KV KCGVCGLVGH NDKCP++IE+  ++R YDP  N YN+GW+DNP
Sbjct: 58  MTTLLTSFVLGTPLKVTKCGVCGLVGHQNDKCPEVIEDVNIVRRYDPHGNTYNSGWRDNP 117

Query: 61  NLRWGNDNQRPSQATSSANNQ-------------------------------------GK 120
           NLRWGNDNQ+ + A S+++ Q                                     GK
Sbjct: 118 NLRWGNDNQKHTHAPSTSSTQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTTTSKMDGK 177

Query: 121 GKLPAQPEYANVSAISLRSGKILETP-SREEKVTSTPILLNNNEETKEKKLETNVLPSSS 180
           GKL AQP +ANVS ISLRSGKIL+TP S+E+KVTS P+ LN+  E+KE+K+ETN  PS+S
Sbjct: 178 GKLSAQPGHANVSVISLRSGKILDTPTSKEKKVTSKPLPLNSKNESKEEKVETNPSPSNS 237

Query: 181 NKGKSHILDYTPYIPKASFPSKLAPKKKEASKEEELLEIFKKVQINLPSRQSQSKIAW 201
              KS + D+TPYIPK  FPS+L PK+KE  KEEELLE+F+KVQINLP   +  ++ W
Sbjct: 238 KNDKSPLNDFTPYIPKPPFPSRLTPKEKETPKEEELLEMFRKVQINLPLLDAIQQVPW 295

[Close]

BLAST of PI0001197 vs. NCBI nr
Match: KAA0032798.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30356.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 241.9 bits (616), Expect = 6.7e-60
Identity = 129/227 (56.83%), Postives = 159/227 (70.04%), Query Frame = 0


Query: 1   MTTLLTSFVQGGFVKVAKCGVCGLVGHPNDKCPDLIEEAKVIRNYDPQSNAYNAGWKDNP 60
           MTTLLTSFVQG  +KV KCGVCGLVG+PNDKCP +IE+  ++R YDP  N YN GW+DNP
Sbjct: 165 MTTLLTSFVQGTPLKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWRDNP 224

Query: 61  NLRWGNDNQRPSQATSSANNQ------------------------------------GKG 120
           NLRWGNDNQ+ +QA  +++NQ                                    GKG
Sbjct: 225 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIALATNTLSFQQEMKQQMTQLTTVLSKMDGKG 284

Query: 121 KLPAQPEYANVSAISLRSGKILETP-SREEKVTSTPILLNNNEETKEKKLETNVLPSSSN 180
           KLPAQP++ NVSAISLRSGKIL+TP ++E+KVTS  + LN+  ++KE+K+ETN L S+S 
Sbjct: 285 KLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKVETNPLSSNSK 344

Query: 181 KGKSHILDYTPYIPKASFPSKLAPKKKEASKEEELLEIFKKVQINLP 191
             KS + D+TPYIPK  FPS+LAPKKKE  K+EELLE+FKKVQINLP
Sbjct: 345 NDKSPLNDFTPYIPKPPFPSRLAPKKKETPKKEELLEMFKKVQINLP 391

[Close]

BLAST of PI0001197 vs. NCBI nr
Match: KAA0047407.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 1.5e-59
Identity = 127/228 (55.70%), Postives = 156/228 (68.42%), Query Frame = 0


Query: 1   MTTLLTSFVQGGFVKVAKCGVCGLVGHPNDKCPDLIEEAKVIRNYDPQSNAYNAGWKDNP 60
           MTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP++IE+  ++R YDP  N YN+GW+DNP
Sbjct: 142 MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNP 201

Query: 61  NLRWGNDNQRPSQATSSANNQ-------------------------------------GK 120
           NLRWGNDNQ+ +QA S+++NQ                                     GK
Sbjct: 202 NLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 261

Query: 121 GKLPAQPEYANVSAISLRSGKILETP-SREEKVTSTPILLNNNEETKEKKLETNVLPSSS 180
           GKL AQ  YANVSA+SLRSGKIL+TP ++E+K TS P+ LN   E KE+K+ETN  P +S
Sbjct: 262 GKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNS 321

Query: 181 NKGKSHILDYTPYIPKASFPSKLAPKKKEASKEEELLEIFKKVQINLP 191
              K  + D+TPYIPK  FPS+LAPKKKE  K+EE+LE+F+KVQINLP
Sbjct: 322 KNDKFPLNDFTPYIPKPPFPSRLAPKKKETPKKEEILEMFRKVQINLP 369

[Close]

BLAST of PI0001197 vs. NCBI nr
Match: KAA0061315.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.4 bits (612), Expect = 2.0e-59
Identity = 128/238 (53.78%), Postives = 160/238 (67.23%), Query Frame = 0


Query: 1   MTTLLTSFVQGGFVKVAKCGVCGLVGHPNDKCPDLIEEAKVIRNYDPQSNAYNAGWKDNP 60
           MTTLLTSFV G  +KV KCGVCGLVGH NDKCP++IE+  ++R YDP  N YN+GW+DNP
Sbjct: 137 MTTLLTSFVLGTPLKVTKCGVCGLVGHQNDKCPEVIEDVNIVRRYDPHGNTYNSGWRDNP 196

Query: 61  NLRWGNDNQRPSQATSSANNQ-------------------------------------GK 120
           NLRWGNDNQ+ + A S+++ Q                                     GK
Sbjct: 197 NLRWGNDNQKHTHAPSTSSTQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTTTSKMDGK 256

Query: 121 GKLPAQPEYANVSAISLRSGKILETP-SREEKVTSTPILLNNNEETKEKKLETNVLPSSS 180
           GKL AQP +ANVS ISLRSGKIL+TP S+E+KVTS P+ LN+  E+KE+K+ETN  PS+S
Sbjct: 257 GKLSAQPGHANVSVISLRSGKILDTPTSKEKKVTSKPLPLNSKNESKEEKVETNPSPSNS 316

Query: 181 NKGKSHILDYTPYIPKASFPSKLAPKKKEASKEEELLEIFKKVQINLPSRQSQSKIAW 201
              KS + D+TPYIPK  FPS+L PK+KE  KEEELLE+F+KVQINLP   +  ++ W
Sbjct: 317 KNDKSPLNDFTPYIPKPPFPSRLTPKEKETPKEEELLEMFRKVQINLPLLDAIQQVPW 374

[Close]

BLAST of PI0001197 vs. NCBI nr
Match: TYK14267.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.4 bits (612), Expect = 2.0e-59
Identity = 128/238 (53.78%), Postives = 160/238 (67.23%), Query Frame = 0


Query: 1   MTTLLTSFVQGGFVKVAKCGVCGLVGHPNDKCPDLIEEAKVIRNYDPQSNAYNAGWKDNP 60
           MTTLLTSFV G  +KV KCGVCGLVGH NDKCP++IE+  ++R YDP  N YN+GW+DNP
Sbjct: 72  MTTLLTSFVLGTPLKVTKCGVCGLVGHQNDKCPEVIEDVNIVRRYDPHGNTYNSGWRDNP 131

Query: 61  NLRWGNDNQRPSQATSSANNQ-------------------------------------GK 120
           NLRWGNDNQ+ + A S+++ Q                                     GK
Sbjct: 132 NLRWGNDNQKHTHAPSTSSTQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTTTSKMDGK 191

Query: 121 GKLPAQPEYANVSAISLRSGKILETP-SREEKVTSTPILLNNNEETKEKKLETNVLPSSS 180
           GKL AQP +ANVS ISLRSGKIL+TP S+E+KVTS P+ LN+  E+KE+K+ETN  PS+S
Sbjct: 192 GKLSAQPGHANVSVISLRSGKILDTPTSKEKKVTSKPLPLNSKNESKEEKVETNPSPSNS 251

Query: 181 NKGKSHILDYTPYIPKASFPSKLAPKKKEASKEEELLEIFKKVQINLPSRQSQSKIAW 201
              KS + D+TPYIPK  FPS+L PK+KE  KEEELLE+F+KVQINLP   +  ++ W
Sbjct: 252 KNDKSPLNDFTPYIPKPPFPSRLTPKEKETPKEEELLEMFRKVQINLPLLDAIQQVPW 309

[Close]

BLAST of PI0001197 vs. NCBI nr
Match: XP_008465471.1 (PREDICTED: uncharacterized protein LOC103503078, partial [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 2.0e-59
Identity = 128/238 (53.78%), Postives = 160/238 (67.23%), Query Frame = 0


Query: 1   MTTLLTSFVQGGFVKVAKCGVCGLVGHPNDKCPDLIEEAKVIRNYDPQSNAYNAGWKDNP 60
           MTTLLTSFV G  +KV KCGVCGLVGH NDKCP++IE+  ++R YDP  N YN+GW+DNP
Sbjct: 58  MTTLLTSFVLGTPLKVTKCGVCGLVGHQNDKCPEVIEDVNIVRRYDPHGNTYNSGWRDNP 117

Query: 61  NLRWGNDNQRPSQATSSANNQ-------------------------------------GK 120
           NLRWGNDNQ+ + A S+++ Q                                     GK
Sbjct: 118 NLRWGNDNQKHTHAPSTSSTQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTTTSKMDGK 177

Query: 121 GKLPAQPEYANVSAISLRSGKILETP-SREEKVTSTPILLNNNEETKEKKLETNVLPSSS 180
           GKL AQP +ANVS ISLRSGKIL+TP S+E+KVTS P+ LN+  E+KE+K+ETN  PS+S
Sbjct: 178 GKLSAQPGHANVSVISLRSGKILDTPTSKEKKVTSKPLPLNSKNESKEEKVETNPSPSNS 237

Query: 181 NKGKSHILDYTPYIPKASFPSKLAPKKKEASKEEELLEIFKKVQINLPSRQSQSKIAW 201
              KS + D+TPYIPK  FPS+L PK+KE  KEEELLE+F+KVQINLP   +  ++ W
Sbjct: 238 KNDKSPLNDFTPYIPKPPFPSRLTPKEKETPKEEELLEMFRKVQINLPLLDAIQQVPW 295

The following BLAST results are available for this feature:

BLAST of PI0001197 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001197 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SQH8	3.3e-60	56.83	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3CRR8	7.2e-60	55.70	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7V668	9.5e-60	53.78	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3CQR9	9.5e-60	53.78	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CQF6	9.5e-60	53.78	uncharacterized protein LOC103503078 OS=Cucumis melo OX=3656 GN=LOC103503078 PE=...	[more]

BLAST of PI0001197 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032798.1	6.7e-60	56.83	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30356.1 retrotranspos...	[more]
KAA0047407.1	1.5e-59	55.70	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotranspos...	[more]
KAA0061315.1	2.0e-59	53.78	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
TYK14267.1	2.0e-59	53.78	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
XP_008465471.1	2.0e-59	53.78	PREDICTED: uncharacterized protein LOC103503078, partial [Cucumis melo]	[more]

BLAST of PI0001197 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001197.1	PI0001197.1	mRNA