PI0001159 (gene) Melon (PI 482460) v1

Overview
NamePI0001159
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionChromosome-associated kinesin KIF4
Locationchr10: 9412456 .. 9412905 (-)
RNA-Seq ExpressionPI0001159
SyntenyPI0001159
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGATATTAACGTTATGGCTGCTATGTCTGGTTCCACCTCTGCTCTTGTTGCATCTGCCGATGCGACAAAAGCAGCTGCAGCAGGTAATCTTGGCGATGCAGCTGATGCAGTTTATCGTGCTGAAGCTTCTGCTTTGGCTACGAAAGCTGCATCGGAAGTTGTTGTGGCTGCTGCCCCGGGAACCCTTATGGCCAATCTCACCACTATTTCAGCTAATCTTGCAAAAATTTCTGCTTCAGTGGCTTCTATTGCTTTGAACATTGCTTCTGCGGCCACTCCCAATCCTCATCTTAATAATGCTGTGGTTCCTAATGTCAACCAACAACGACAACATAATTGCGGATGTGACGTTTACTGCAAAACTAGAAGATGCGACTGTCGTGGAACTGACAAACGATGCACTGACGATTGTAGTTGCTCCATTCTTCAATGTAGAAATAGATAA

mRNA sequence

ATGGACGATATTAACGTTATGGCTGCTATGTCTGGTTCCACCTCTGCTCTTGTTGCATCTGCCGATGCGACAAAAGCAGCTGCAGCAGGTAATCTTGGCGATGCAGCTGATGCAGTTTATCGTGCTGAAGCTTCTGCTTTGGCTACGAAAGCTGCATCGGAAGTTGTTGTGGCTGCTGCCCCGGGAACCCTTATGGCCAATCTCACCACTATTTCAGCTAATCTTGCAAAAATTTCTGCTTCAGTGGCTTCTATTGCTTTGAACATTGCTTCTGCGGCCACTCCCAATCCTCATCTTAATAATGCTGTGGTTCCTAATGTCAACCAACAACGACAACATAATTGCGGATGTGACGTTTACTGCAAAACTAGAAGATGCGACTGTCGTGGAACTGACAAACGATGCACTGACGATTGTAGTTGCTCCATTCTTCAATGTAGAAATAGATAA

Coding sequence (CDS)

ATGGACGATATTAACGTTATGGCTGCTATGTCTGGTTCCACCTCTGCTCTTGTTGCATCTGCCGATGCGACAAAAGCAGCTGCAGCAGGTAATCTTGGCGATGCAGCTGATGCAGTTTATCGTGCTGAAGCTTCTGCTTTGGCTACGAAAGCTGCATCGGAAGTTGTTGTGGCTGCTGCCCCGGGAACCCTTATGGCCAATCTCACCACTATTTCAGCTAATCTTGCAAAAATTTCTGCTTCAGTGGCTTCTATTGCTTTGAACATTGCTTCTGCGGCCACTCCCAATCCTCATCTTAATAATGCTGTGGTTCCTAATGTCAACCAACAACGACAACATAATTGCGGATGTGACGTTTACTGCAAAACTAGAAGATGCGACTGTCGTGGAACTGACAAACGATGCACTGACGATTGTAGTTGCTCCATTCTTCAATGTAGAAATAGATAA

Protein sequence

MDDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAAPGTLMANLTTISANLAKISASVASIALNIASAATPNPHLNNAVVPNVNQQRQHNCGCDVYCKTRRCDCRGTDKRCTDDCSCSILQCRNR
Homology
[Close]
BLAST of PI0001159 vs. ExPASy TrEMBL
Match: A0A5D3CTB1 (Chromosome-associated kinesin KIF4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001100 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 143/149 (95.97%), Postives = 147/149 (98.66%), Query Frame = 0 

Query: 1   MDDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60
           M+DINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA
Sbjct: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60

Query: 61  PGTLMANLTTISANLAKISASVASIALNIASAATPNPHLNNAVVPNVNQQRQHNCGCDVY 120
           PGTLMANLTTISA+LAKISASVASIALNIASA  PNPH++NAVVPNVNQQRQHNCGCDVY
Sbjct: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY 120

Query: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 150
           CKTRRCDCRGTDKRCTDDCSCSILQCRNR
Sbjct: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 149

[Close]
BLAST of PI0001159 vs. ExPASy TrEMBL
Match: A0A1S3CNA8 (uncharacterized protein LOC103502885 OS=Cucumis melo OX=3656 GN=LOC103502885 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 143/149 (95.97%), Postives = 147/149 (98.66%), Query Frame = 0 

Query: 1   MDDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60
           M+DINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA
Sbjct: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60

Query: 61  PGTLMANLTTISANLAKISASVASIALNIASAATPNPHLNNAVVPNVNQQRQHNCGCDVY 120
           PGTLMANLTTISA+LAKISASVASIALNIASA  PNPH++NAVVPNVNQQRQHNCGCDVY
Sbjct: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY 120

Query: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 150
           CKTRRCDCRGTDKRCTDDCSCSILQCRNR
Sbjct: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 149

[Close]
BLAST of PI0001159 vs. NCBI nr
Match: XP_008465229.1 (PREDICTED: uncharacterized protein LOC103502885 [Cucumis melo] >KAA0065697.1 Chromosome-associated kinesin KIF4 [Cucumis melo var. makuwa] >TYK14448.1 Chromosome-associated kinesin KIF4 [Cucumis melo var. makuwa])

HSP 1 Score: 258.8 bits (660), Expect = 2.8e-65
Identity = 143/149 (95.97%), Postives = 147/149 (98.66%), Query Frame = 0 

Query: 1   MDDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60
           M+DINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA
Sbjct: 1   MEDINVMAAMSGSTSALVASADATKAAAAGNLGDAADAVYRAEASALATKAASEVVVAAA 60

Query: 61  PGTLMANLTTISANLAKISASVASIALNIASAATPNPHLNNAVVPNVNQQRQHNCGCDVY 120
           PGTLMANLTTISA+LAKISASVASIALNIASA  PNPH++NAVVPNVNQQRQHNCGCDVY
Sbjct: 61  PGTLMANLTTISASLAKISASVASIALNIASAPNPNPHVDNAVVPNVNQQRQHNCGCDVY 120

Query: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 150
           CKTRRCDCRGTDKRCTDDCSCSILQCRNR
Sbjct: 121 CKTRRCDCRGTDKRCTDDCSCSILQCRNR 149

The following BLAST results are available for this feature:
BLAST of PI0001159 vs.
Match NameE-valueIdentityDescription
BLAST of PI0001159 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CTB11.4e-6595.97Chromosome-associated kinesin KIF4 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3CNA81.4e-6595.97uncharacterized protein LOC103502885 OS=Cucumis melo OX=3656 GN=LOC103502885 PE=... [more]
BLAST of PI0001159 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008465229.12.8e-6595.97PREDICTED: uncharacterized protein LOC103502885 [Cucumis melo] >KAA0065697.1 Chr... [more]
BLAST of PI0001159 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0001159.1PI0001159.1mRNA