Moc11g14340 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g14340
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr11: 10639344 .. 10643092 (+)
RNA-Seq Expression	Moc11g14340
Synteny	Moc11g14340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACCAGAAAAGAGTCAACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGCTTAACTTGGACGACCCCCAGGTTGGAGGACCCGAGGATGGGACCAGCCAGCCAAGCCTAGAACGTCAGGAAGGGTTGCCCGAGGCGCATGCACTAACGACCCCTGATCCGCTCCAAAAGCAGTTCGCGGTCTTGGAAGACAAGGTAGAGGGCATGCTTCAACTCATGACCCAAGTCCTTCGACAATTCGAGCGACAAGAGTCCGACGAAGTGCCCCTTGTCAGAAACCCGAGAAAGGGGAAGGGCCCAGCGCAAAGCGAGACTAAGGAGTCAACGAACAGTGCAGGAAGTAAGTTGCGGATAGGTGGAAATACCAGGCAACGAACCCGGATTTTTGACTCCCAAAAGATGAAAAAGCAACATAAACCCCCGACACCAAATGTGGGCAAGAGCGACCATGATGACAGAAACTCTGAGCCGACAAGTCTCGACAAAGGCAAACCGGCAGATCGACCAGAGTCCTTGGAGAAGCGACATAACCAAAAAAAGAAGGGATTCGACCTCGAAGAACTACTGGATCAAGCCGACTCACCATTCACGGAGGAGATCATGAGAGAGAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAACAATTCGACGGGACGACCGACCCAGTATACCATCTAGATGCTTATCGGGAATGGATGGATATCTACGGAGTGTCGGAAGCGATCAGGTGCCGGGTATTCTCGACTACTTTAAACGGGTCGGCCAGAATATGGTTTCGACAATTAAAATGAGGGTCAATCTCGAGTTTCAAGAGCTTGGCCAAAGCATTCGTGACCCAATTTGTAGGGGGACGGTGTCGGAGCCGACCTGTGGCTTATCTTTTAACTATTAAACAGAGGACGGCAGAGAGTCTACACGACTATGTAGCTCGGTTCAACGAGGAGAAGCTGCAGGTAGAAGGCCTTACAGACGCTGTATCTCTGCTGGCCTTCATGTCCGGCGTCAGGGATGAGCATTTATCATTTTCGTTCGGAAAGAAAACACCGAGTACCTTCTCGAAGGCGCTCAGCCGAGCTCAGAGGTACATGAGCGCTGGTAAGTTCTTTTACTCAAAAAGAGAGCCAGACAGAAAGCGAACCGACCAAAAGAGGGAGAGATTAAAGGGGAACAACGAGTGTTGCGGGAATGCTACTATACCCAATGAAGGGCAACGACAGGACTTCTACTAAGGGGGGCTGTTGACCTTTCCTTTCTTCCTTCAAATGTGGTTGTTTTTGTTTCTCTACTTTTAGCAAGATTTCTAATTATTATTTCTTTTATTCAATAAAGTGTCCACTTGTTTGGTTCTCTGTCAACTATATCTCTTAAATCCAAAACGAGATACCGACGACTTTGATAAAACATTTTTCCTCGTCTACAAGCGTACTCTCAAAAGATATCAACAATACACTTGAGAGTAGGGGGCAATAGGTACCGACCACGGCTACTCAACGACGTAAGCTTGGTAAATCCAACTCTACACGGCGACAATAAAACCAGCTATAGCCGAGCAGGCCGGGTAGGGCTCGGGACCGACCACTGCTCGGGTCCGACCACTGTTCGACGTCGACCAAGTGCAAACGGGCACAATCTACATTAATCGGCGGTTTTATGAGATAGCTTATTTTGGTCAATAAGCACGTGCGACGAGGCATGGATCTACTTTAATCGACGCGTTTGGAAAGAACAATTAAACAATCTCAACACGGCCAAACCAGAAGCGGGTCGATTGACCTAGCACGGTTAAAACATGAGATGGAGTAAAAGGCCAAAAACAACAGCGGGTGTAAAACCTTCGGCTATGACCAACGAGTTAAAAACCAACGACGGGCCTAAATAAAGCGACAAACTTCTCGGGAGAGGCAAGGCCGAGCCCTGGTCATCGACTTAATTCGCCCAACCTTGACAGGGGAAAACCGGCTGAGGAGGTAGAATATGTCCCTCTAATAACCGAAGAACGACGGGTCAACATCGGAACCAAGTTGGGGATTGAGGAAAGAGAAAGCCTTATAAACTTCCTCAGAAGCAACGCCGGTGTGTTCGCATGGCCACTAGAGAACATGCCGGGAATCGATCGAGGAGTTATGGTACATCGACTCAACGTCGACGAGAGCTGTAAGCCAGTGAAACAGAAGCGTCGCGCGTTCAACCAAGAAAGGAACGAGATTGTAGCTAAACAGGTGAATGAGCTACTGAAAACAGGTTTCATTCGGGAAGTACATTATCCCCGGTGGATATCCAGCGTAGTGCTGGTAAGGAAGCCAAAAGACAAATGGAGAATGTGCATCAACTTCACGGACCTAAATAAGTCTGTCCAAATGATTCTTTTCCTTTGCCTCGAATAGATCAACTGGTTGATGCCACTGTGGGACATGAAAGATTGAGTTTCATGGATGCCTACTCTGGATATAATCAAATCAAGATGCATGTACCGGATCAGGAGAAAACCTCTTTTGTCACGAGTCGAGGCTTGTATTGTTACACCGTGATGCCGTTCGGATTGAAGAATGCAGGTGCAACCTACCGACGAATGTTGAATCGGATGTTTGCAGCCTTAATCGGCAAAAATATGAATACCTACATATCTACGACTTGAATATCTACATATCTACGACCAATCAAGAGACTCAAAATTGGGACGGACCTAGAAGCAGGCCGATAAGCTAAAAGTCAATCAGTGAAACCAGGGAAAAGAATCCCGAGGTGCTGAAAAAGGCATGCGTACAGGCCCAGCAAGGTTAAAACAGAAAACAGGCAAGCCTAACCGATCAACGAAACCCACGGGTAGAAAATCATATGGCAAAAGCCAAAATAGGTTAAAAACCCAAGGGTGTTGATTTAACTTGGGGTAAAAAACCGGCAGAAGCCAAATATGTTAGAAACCTAAGAGTGTCGACTAAACTCAGGGTATAAAAGCCATTGGCAAAAGCCAAGTGGGTTAGAAACCCGAGAGTAAACCCTGAGGTATAAAACATGGGCAGAAGCCAAATAGGTTAGAAACCCAAAGGTATCGACATTAGTTCTGTTAAAGTTAGATCCCAAGGCCAAAAGTAAATGGTTTAAACTCAGATGAGAATAAAACCAGGCTCAGGAGACTTGATTATGGTCAACGAAAATTGGAAAAAACTTCCAATTCATGAATAGCATCGACAAGTTCAAGGCACAAAACCAGTGGCAAGAACCAAGCACTAAAATCCAGAATTAGATCAAAAGCTTTTGGTAGAAGCCCTGTGCGTTAGCAACCTTCTCATTTTTAGCCATTTATATACAACGGTCTTGTGATAACGACAAGCGACAAGTACTCTCAAAACAAAGATCTTTACACAATTATTCGTCTTCTGTTTTGAGAGTGGGGGCCATTGTTATGGAGAACAAAAACGACCCGAAACGGGACAAGGAGTTGAAGTCTGAGATCATTGATTGGGGGAGACCGGCCCGTGACGTAACGGGCCAGCCCAAAGAACGACCTATTGCCGGGGCAAAGAGCGAGGAAAGCGACTGGCGGAGAACTAACCGGGCCGAGAGGGCTCGGTCCCGACCCGGGGCTCGGTCCCGACCCGGGCCTCGGTCCAGACCCGGGGCTCGGCCCACGGCCCAGCCAGCGATCCCCCATCTTCGATCGACGATTCCACCCAGGCCCTGCAACGGTGAATTAGGGTTAGCTATGGAAAGTTCTGGAACAACTCCACGCTATAAGTAG

mRNA sequence

ATGACACCAGAAAAGAGTCAACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGCTTAACTTGGACGACCCCCAGGTTGGAGGACCCGAGGATGGGACCAGCCAGCCAAGCCTAGAACGTCAGGAAGGGTTGCCCGAGGCGCATGCACTAACGACCCCTGATCCGCTCCAAAAGCAGTTCGCGGTCTTGGAAGACAAGGTAGAGGGCATGCTTCAACTCATGACCCAAGTCCTTCGACAATTCGAGCGACAAGAGTCCGACGAAGTGCCCCTTGTCAGAAACCCGAGAAAGGGGAAGGGCCCAGCGCAAAGCGAGACTAAGGAGTCAACGAACAGTGCAGGAAGTAAGTTGCGGATAGGTGGAAATACCAGGCAACGAACCCGGATTTTTGACTCCCAAAAGATGAAAAAGCAACATAAACCCCCGACACCAAATGTGGGCAAGAGCGACCATGATGACAGAAACTCTGAGCCGACAAGTCTCGACAAAGGCAAACCGGCAGATCGACCAGAGTCCTTGGAGAAGCGACATAACCAAAAAAAGAAGGGATTCGACCTCGAAGAACTACTGGATCAAGCCGACTCACCATTCACGGAGGAGATCATGAGAGAGAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAACAATTCGACGGGACGACCGACCCAGTATACCATCTAGATGCTTATCGGGAATGGATGGATATCTACGGAGTGTCGGAAGCGATCAGGTGCCGGAGGACGGCAGAGAGTCTACACGACTATGTAGCTCGGTTCAACGAGGAGAAGCTGCAGGTAGAAGGCCTTACAGACGCTGTATCTCTGCTGGCCTTCATGTCCGGCGTCAGGGATGAGCATTTATCATTTTCGTTCGGAAAGAAAACACCGAGTACCTTCTCGAAGGCGCTCAGCCGAGCTCAGAGAGTGGGGGCCATTGTTATGGAGAACAAAAACGACCCGAAACGGGACAAGGAGTTGAAGTCTGAGATCATTGATTGGGGGAGACCGGCCCGTGACGTAACGGGCCAGCCCAAAGAACGACCTATTGCCGGGGCAAAGAGCGAGGAAAGCGACTGGCGGAGAACTAACCGGGCCGAGAGGGCTCGGTCCCGACCCGGGGCTCGGTCCCGACCCGGGCCTCGGTCCAGACCCGGGGCTCGGCCCACGGCCCAGCCAGCGATCCCCCATCTTCGATCGACGATTCCACCCAGGCCCTGCAACGGTGAATTAGGGTTAGCTATGGAAAGTTCTGGAACAACTCCACGCTATAAGTAG

Coding sequence (CDS)

ATGACACCAGAAAAGAGTCAACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGCTTAACTTGGACGACCCCCAGGTTGGAGGACCCGAGGATGGGACCAGCCAGCCAAGCCTAGAACGTCAGGAAGGGTTGCCCGAGGCGCATGCACTAACGACCCCTGATCCGCTCCAAAAGCAGTTCGCGGTCTTGGAAGACAAGGTAGAGGGCATGCTTCAACTCATGACCCAAGTCCTTCGACAATTCGAGCGACAAGAGTCCGACGAAGTGCCCCTTGTCAGAAACCCGAGAAAGGGGAAGGGCCCAGCGCAAAGCGAGACTAAGGAGTCAACGAACAGTGCAGGAAGTAAGTTGCGGATAGGTGGAAATACCAGGCAACGAACCCGGATTTTTGACTCCCAAAAGATGAAAAAGCAACATAAACCCCCGACACCAAATGTGGGCAAGAGCGACCATGATGACAGAAACTCTGAGCCGACAAGTCTCGACAAAGGCAAACCGGCAGATCGACCAGAGTCCTTGGAGAAGCGACATAACCAAAAAAAGAAGGGATTCGACCTCGAAGAACTACTGGATCAAGCCGACTCACCATTCACGGAGGAGATCATGAGAGAGAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAACAATTCGACGGGACGACCGACCCAGTATACCATCTAGATGCTTATCGGGAATGGATGGATATCTACGGAGTGTCGGAAGCGATCAGGTGCCGGAGGACGGCAGAGAGTCTACACGACTATGTAGCTCGGTTCAACGAGGAGAAGCTGCAGGTAGAAGGCCTTACAGACGCTGTATCTCTGCTGGCCTTCATGTCCGGCGTCAGGGATGAGCATTTATCATTTTCGTTCGGAAAGAAAACACCGAGTACCTTCTCGAAGGCGCTCAGCCGAGCTCAGAGAGTGGGGGCCATTGTTATGGAGAACAAAAACGACCCGAAACGGGACAAGGAGTTGAAGTCTGAGATCATTGATTGGGGGAGACCGGCCCGTGACGTAACGGGCCAGCCCAAAGAACGACCTATTGCCGGGGCAAAGAGCGAGGAAAGCGACTGGCGGAGAACTAACCGGGCCGAGAGGGCTCGGTCCCGACCCGGGGCTCGGTCCCGACCCGGGCCTCGGTCCAGACCCGGGGCTCGGCCCACGGCCCAGCCAGCGATCCCCCATCTTCGATCGACGATTCCACCCAGGCCCTGCAACGGTGAATTAGGGTTAGCTATGGAAAGTTCTGGAACAACTCCACGCTATAAGTAG

Protein sequence

MTPEKSQRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQFAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKGPAQSETKESTNSAGSKLRIGGNTRQRTRIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESLEKRHNQKKKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTDPVYHLDAYREWMDIYGVSEAIRCRRTAESLHDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQRVGAIVMENKNDPKRDKELKSEIIDWGRPARDVTGQPKERPIAGAKSEESDWRRTNRAERARSRPGARSRPGPRSRPGARPTAQPAIPHLRSTIPPRPCNGELGLAMESSGTTPRYK

Homology

[Close]

BLAST of Moc11g14340 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 463.0 bits (1190), Expect = 2.8e-126
Identity = 273/452 (60.40%), Postives = 298/452 (65.93%), Query Frame = 0


Query: 1   MTPEKSQRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQ 60
           MTPE+S RRSDD+CSAKRRLNL DPQVGGPEDGTSQP+ ERQEGL E  ALTTP+P QKQ
Sbjct: 1   MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQPNQERQEGLXEXXALTTPEPFQKQ 60

Query: 61  FAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKGPAQSETKESTNSAGSKLRI 120
           FAVLEDK                  ESDEVPLVR+P+KGKGP +S+T+ESTNS GSKLRI
Sbjct: 61  FAVLEDK------------------ESDEVPLVRDPKKGKGPTESDTEESTNSVGSKLRI 120

Query: 121 GGNTRQRTRIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESLEKRHNQ 180
           GGNTRQRTRIFD +K KKQHK P PN GKSDHDDRNSEP SLDKGKPADRPES EKRH+ 
Sbjct: 121 GGNTRQRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESSEKRHSH 180

Query: 181 KKKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTDPVYHLDAYREWMDIYG 240
           K+KGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFD TTDPV HLDAYREWMDIYG
Sbjct: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYG 240

Query: 241 VSEAIRCR---------------------------------------------------- 300
           VSEA+RCR                                                    
Sbjct: 241 VSEAVRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTI 300

Query: 301 --RTAESLHDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALS 360
             RT ESL DYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGK+TP+TFS+ALS
Sbjct: 301 KQRTTESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALS 360

Query: 361 RAQR---VGAIVME------NKNDPKRDKE-LKSEIIDWGRPARDVTGQPKER------- 380
           RAQR    G            + DPKR++   K +   W +  R     P  +       
Sbjct: 361 RAQRYMSAGEFFYSKREPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPT 420

[Close]

BLAST of Moc11g14340 vs. NCBI nr
Match: XP_022145129.1 (uncharacterized protein LOC111014646 [Momordica charantia])

HSP 1 Score: 386.3 bits (991), Expect = 3.3e-103
Identity = 199/218 (91.28%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 1   MTPEKSQRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQ 60
           MTPE+S RRSDDNCSAKRRLNLDDPQVGGPEDGTSQP+LERQEGLPEAHALTTP+PLQKQ
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60

Query: 61  FAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKGPAQSETKESTNSAGSKLRI 120
           FAVLEDKVEGMLQ MTQVLRQ+ERQESDEVPLVR+PRKGKGPAQSET+ESTNSAGSKLRI
Sbjct: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI 120

Query: 121 GGNTRQRTRIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESLEKRHNQ 180
           GGNTR+RT+IFDSQKMKKQHK   PN G+SDHDDRNSEP SLDKGKPAD+PES EKRHNQ
Sbjct: 121 GGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQ 180

Query: 181 KKKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ 219
           K+KGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ
Sbjct: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ 218

[Close]

BLAST of Moc11g14340 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 293.5 bits (750), Expect = 2.9e-75
Identity = 173/301 (57.48%), Postives = 194/301 (64.45%), Query Frame = 0


Query: 125 RQRTRIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESLEKRHNQKKKG 184
           R+RTRIFDSQK+KKQHK   PN  K+DHD+RNSEP SL+KGKP DRPES EKRHNQK+KG
Sbjct: 12  RRRTRIFDSQKIKKQHKSLAPNGSKNDHDNRNSEPISLNKGKPIDRPESSEKRHNQKEKG 71

Query: 185 FDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTDPVYHLDAYREWMDIYGVSEA 244
           FDLEELL QADSPFTEEIMREKVPPKFKLPTVK FDG T+PV HLDAYREWMDIYGVS+A
Sbjct: 72  FDLEELLGQADSPFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDA 131

Query: 245 IRCR------------------------------------------------------RT 304
           IRCR                                                      RT
Sbjct: 132 IRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRT 191

Query: 305 AESLHDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQR 364
           AESLHDYVARFNEEKLQ+EGLTDAVSLLAFMSGVRDEHLSFSF K+TPSTFS+ALSRAQR
Sbjct: 192 AESLHDYVARFNEEKLQLEGLTDAVSLLAFMSGVRDEHLSFSFEKRTPSTFSEALSRAQR 251

Query: 365 V--GAIVMENKNDPKRDKELKSEIIDWGRPARDVTGQPKERPIAGAKSEESDWRRTNRAE 370
               +    +K +P   +                T Q +ER  +G K + S W + +R  
Sbjct: 252 YMSASEFCYSKREPDGKR----------------TDQKRER--SGDKPQGSRWEKRDRGS 294

[Close]

BLAST of Moc11g14340 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 208.8 bits (530), Expect = 9.5e-50
Identity = 116/173 (67.05%), Postives = 123/173 (71.10%), Query Frame = 0


Query: 138 KQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESLEKRHNQKKKGFDLEELLDQADSP 197
           +QHK P PN GKSDH+DR+SEP SLDKGKPADRPES EKRHNQKKKGFDLEELLDQADSP
Sbjct: 41  QQHKSPAPNGGKSDHEDRSSEPISLDKGKPADRPESSEKRHNQKKKGFDLEELLDQADSP 100

Query: 198 FTEEIMREKVPPKFKLPTVKQFDGTTDPVYHLDAYREWMDIYGVSEAIRCRRTAESLHDY 257
           FTEEIMREK                                          RT ESLHDY
Sbjct: 101 FTEEIMREK------------------------------------------RTTESLHDY 160

Query: 258 VARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQR 311
           V RFN+EKLQVEGLTDAVSLLAF+ GVRDEHLSFSFGK+TPSTFS+ALSRAQR
Sbjct: 161 VTRFNKEKLQVEGLTDAVSLLAFIFGVRDEHLSFSFGKRTPSTFSEALSRAQR 171

[Close]

BLAST of Moc11g14340 vs. NCBI nr
Match: XP_022150035.1 (uncharacterized protein LOC111018307 [Momordica charantia])

HSP 1 Score: 172.6 bits (436), Expect = 7.5e-39
Identity = 110/227 (48.46%), Postives = 126/227 (55.51%), Query Frame = 0


Query: 200 EEIMREKVPPKFKLPTVKQFDGTTDPVYHLDAYREWMDIYGVSEAIRCR----------- 259
           EEIM+ KVPPKFKLPTVKQFDGT D V HLDAYREWMDIYGVSEA++CR           
Sbjct: 2   EEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSAR 61

Query: 260 -------------------------------------------RTAESLHDYVARFNEEK 319
                                                      R  ESLHDYVARFNEEK
Sbjct: 62  VWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEK 121

Query: 320 LQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQR---VGAIVMENKNDP 370
           LQVEGLT+AVSL+AFMS +RDEHLSFSFGKKTPSTFS+ALSRAQ+    G          
Sbjct: 122 LQVEGLTNAVSLMAFMSDIRDEHLSFSFGKKTPSTFSEALSRAQKYMSAGEFFFS----- 181

[Close]

BLAST of Moc11g14340 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 1.4e-126
Identity = 273/452 (60.40%), Postives = 298/452 (65.93%), Query Frame = 0


Query: 1   MTPEKSQRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQ 60
           MTPE+S RRSDD+CSAKRRLNL DPQVGGPEDGTSQP+ ERQEGL E  ALTTP+P QKQ
Sbjct: 1   MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQPNQERQEGLXEXXALTTPEPFQKQ 60

Query: 61  FAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKGPAQSETKESTNSAGSKLRI 120
           FAVLEDK                  ESDEVPLVR+P+KGKGP +S+T+ESTNS GSKLRI
Sbjct: 61  FAVLEDK------------------ESDEVPLVRDPKKGKGPTESDTEESTNSVGSKLRI 120

Query: 121 GGNTRQRTRIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESLEKRHNQ 180
           GGNTRQRTRIFD +K KKQHK P PN GKSDHDDRNSEP SLDKGKPADRPES EKRH+ 
Sbjct: 121 GGNTRQRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESSEKRHSH 180

Query: 181 KKKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTDPVYHLDAYREWMDIYG 240
           K+KGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFD TTDPV HLDAYREWMDIYG
Sbjct: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYG 240

Query: 241 VSEAIRCR---------------------------------------------------- 300
           VSEA+RCR                                                    
Sbjct: 241 VSEAVRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTI 300

Query: 301 --RTAESLHDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALS 360
             RT ESL DYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGK+TP+TFS+ALS
Sbjct: 301 KQRTTESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALS 360

Query: 361 RAQR---VGAIVME------NKNDPKRDKE-LKSEIIDWGRPARDVTGQPKER------- 380
           RAQR    G            + DPKR++   K +   W +  R     P  +       
Sbjct: 361 RAQRYMSAGEFFYSKREPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPT 420

[Close]

BLAST of Moc11g14340 vs. ExPASy TrEMBL
Match: A0A6J1CUA7 (uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014646 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103
Identity = 199/218 (91.28%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 1   MTPEKSQRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPSLERQEGLPEAHALTTPDPLQKQ 60
           MTPE+S RRSDDNCSAKRRLNLDDPQVGGPEDGTSQP+LERQEGLPEAHALTTP+PLQKQ
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60

Query: 61  FAVLEDKVEGMLQLMTQVLRQFERQESDEVPLVRNPRKGKGPAQSETKESTNSAGSKLRI 120
           FAVLEDKVEGMLQ MTQVLRQ+ERQESDEVPLVR+PRKGKGPAQSET+ESTNSAGSKLRI
Sbjct: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI 120

Query: 121 GGNTRQRTRIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESLEKRHNQ 180
           GGNTR+RT+IFDSQKMKKQHK   PN G+SDHDDRNSEP SLDKGKPAD+PES EKRHNQ
Sbjct: 121 GGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQ 180

Query: 181 KKKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ 219
           K+KGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ
Sbjct: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ 218

[Close]

BLAST of Moc11g14340 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-75
Identity = 173/301 (57.48%), Postives = 194/301 (64.45%), Query Frame = 0


Query: 125 RQRTRIFDSQKMKKQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESLEKRHNQKKKG 184
           R+RTRIFDSQK+KKQHK   PN  K+DHD+RNSEP SL+KGKP DRPES EKRHNQK+KG
Sbjct: 12  RRRTRIFDSQKIKKQHKSLAPNGSKNDHDNRNSEPISLNKGKPIDRPESSEKRHNQKEKG 71

Query: 185 FDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDGTTDPVYHLDAYREWMDIYGVSEA 244
           FDLEELL QADSPFTEEIMREKVPPKFKLPTVK FDG T+PV HLDAYREWMDIYGVS+A
Sbjct: 72  FDLEELLGQADSPFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDA 131

Query: 245 IRCR------------------------------------------------------RT 304
           IRCR                                                      RT
Sbjct: 132 IRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRT 191

Query: 305 AESLHDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQR 364
           AESLHDYVARFNEEKLQ+EGLTDAVSLLAFMSGVRDEHLSFSF K+TPSTFS+ALSRAQR
Sbjct: 192 AESLHDYVARFNEEKLQLEGLTDAVSLLAFMSGVRDEHLSFSFEKRTPSTFSEALSRAQR 251

Query: 365 V--GAIVMENKNDPKRDKELKSEIIDWGRPARDVTGQPKERPIAGAKSEESDWRRTNRAE 370
               +    +K +P   +                T Q +ER  +G K + S W + +R  
Sbjct: 252 YMSASEFCYSKREPDGKR----------------TDQKRER--SGDKPQGSRWEKRDRGS 294

[Close]

BLAST of Moc11g14340 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.6e-50
Identity = 116/173 (67.05%), Postives = 123/173 (71.10%), Query Frame = 0


Query: 138 KQHKPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESLEKRHNQKKKGFDLEELLDQADSP 197
           +QHK P PN GKSDH+DR+SEP SLDKGKPADRPES EKRHNQKKKGFDLEELLDQADSP
Sbjct: 41  QQHKSPAPNGGKSDHEDRSSEPISLDKGKPADRPESSEKRHNQKKKGFDLEELLDQADSP 100

Query: 198 FTEEIMREKVPPKFKLPTVKQFDGTTDPVYHLDAYREWMDIYGVSEAIRCRRTAESLHDY 257
           FTEEIMREK                                          RT ESLHDY
Sbjct: 101 FTEEIMREK------------------------------------------RTTESLHDY 160

Query: 258 VARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTPSTFSKALSRAQR 311
           V RFN+EKLQVEGLTDAVSLLAF+ GVRDEHLSFSFGK+TPSTFS+ALSRAQR
Sbjct: 161 VTRFNKEKLQVEGLTDAVSLLAFIFGVRDEHLSFSFGKRTPSTFSEALSRAQR 171

[Close]

BLAST of Moc11g14340 vs. ExPASy TrEMBL
Match: A0A6J1DSV3 (protein SPIRRIG OS=Momordica charantia OX=3673 GN=LOC111022848 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.2e-39
Identity = 93/140 (66.43%), Postives = 111/140 (79.29%), Query Frame = 0


Query: 84  RQESDEVPLVRNPRKGKGPAQSETKESTNSAGSKLRIGGNTRQRTRIFDS---QKMKKQH 143
           R E+ EVPL R PRKGKGP +SE++ESTNS GS+LR+  N ++RT+ FDS   QK KKQ 
Sbjct: 5   RTEAGEVPLFRGPRKGKGPIESESEESTNSVGSRLRLEENIKRRTQNFDSRGQQKDKKQQ 64

Query: 144 KPPTPNVGKSDHDDRNSEPTSLDKGKPADRPESLEKRHNQKKKGFDLEELLDQADSPFTE 203
           K P P+ GKS+HD +N+EP  LDK K  DRPE  E++ ++K+KGFDLEELLDQADSPF E
Sbjct: 65  KSPVPDGGKSNHDKQNAEPIDLDKDKSTDRPELSERQQSKKEKGFDLEELLDQADSPFIE 124

Query: 204 EIMREKVPPKFKLPTVKQFD 221
           EIM EKVPPKFKLPTVKQFD
Sbjct: 125 EIMGEKVPPKFKLPTVKQFD 144

The following BLAST results are available for this feature:

BLAST of Moc11g14340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	2.8e-126	60.40	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022145129.1	3.3e-103	91.28	uncharacterized protein LOC111014646 [Momordica charantia]	[more]
XP_022159109.1	2.9e-75	57.48	uncharacterized protein LOC111025548 [Momordica charantia]	[more]
XP_022142767.1	9.5e-50	67.05	uncharacterized protein LOC111012805 [Momordica charantia]	[more]
XP_022150035.1	7.5e-39	48.46	uncharacterized protein LOC111018307 [Momordica charantia]	[more]

BLAST of Moc11g14340 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g14340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	1.4e-126	60.40	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CUA7	1.6e-103	91.28	uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1E1E7	1.4e-75	57.48	uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CNT2	4.6e-50	67.05	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1DSV3	6.2e-39	66.43	protein SPIRRIG OS=Momordica charantia OX=3673 GN=LOC111022848 PE=4 SV=1	[more]

BLAST of Moc11g14340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..426
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..375
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g14340.1	Moc11g14340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm