Moc11g07040 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g07040
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Rhamnogalacturonan endolyase
Location	chr11: 4843967 .. 4849394 (-)
RNA-Seq Expression	Moc11g07040
Synteny	Moc11g07040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCCACGGGGGTGCGGTTGCAGATACGAGATCGTCATGTAAGTTAGTTTTTCCATTTTGTTCTGATTATGTGAAGATATTTCAGAAGACAATTACGAAAGGGAAAATTGTATGTATATATATATATATTGATGAGGCTAAAGATTTCGGGCTTTTTAATTTGAAAATTGAAAAGAAGAATATTGTAATTTCTGTCGAAAACTCTCCAGATTATTCCTTATATATTCATGCTATGTGCAGGTGGTGGTGGATAATGGAATACTGCAACTAACTTTATCAAAACCAGACGGAATTGTCACTGGCATACGATATAATGGCGTTGACAATCTGCTTGAAGTTCTTAACCCTGAACATAACAGAGGGTATATGTAGTTACAACTGTCACACCTCTGAAATTATTTTAATTAAAATGGGGCGACAAGTCCTTATAGGGAAGTATCTGTTTAGTAGTAAGTATTGTATGTGGTTCTGGATACGTTAAGTTATCTTTTTTTGTATGTTCTCTTGTTCCTTTATAAAATTATCTTATTTTTATCAATAACATTCAGGTACTGGGACCTTGTTTGGAATTCTCCAGGAAGCAAAGGAATATTTGACGTGTATGGCCTTTCCTTCTTCACTTACTAATTATTCTGTATAACTCTTGGAAATTAAATTTGTTGGTCAAAGAAATTGCCTTTCTTTTTCTTGCCAATCAGCTATTAGATTAGTCCTTGCTGATACTGGGGCATTTATATCCTCAATGTCCTCTACTTTTTTTAGCATTTGATTGGTTTTATTTATTATTATTCTATGCTTTCACGTGAATTGAGACCCAATTACCATACAGGATTAAGGGATCAAGTTTTAGGGTTGTAGTGGAAAATGAGGAACGGGTAGAGCTTTCTTTTATGAGGATGTGGGAGCCCTCCCTCGAGGGCAAGTTTGTTCCTTTGAACATAGACAAAAGGTTTGTCCTCAAATTTTTTTATCAATGTACTCAAACCTTTGGAATAACCACTTAATCGAGTATTCCTGTTTTCTCTTCTAGGTTCATAGTGCTACGTGGTTCCTCTGGATTCTACTCTTATGCAATCTATGAGCACTTGAAGGATTGGCCTGATTTTGATCTTGGTGAAACCAGGATCACTTTTAAGCTCAGAAAAGACAAGTGAATATACTTGATCCTTCTCAACTCAAGTCATTTATGATTTCATTGAGACTCAGTATAACGGTGATTAGTTGGTCTTTGATTATAGTGATGCTTCTTGGAATATGATCTTTTTCCCATTATTTTATTTTTACTTTTTCTTTCAAAATGAACAGCTTTAGAGAATATCCCAAGGAAGATATTTTGTAGATTCTAGCTTGGACTTGCATATCCGGGTTGCTTAATTCTCTAAATACACCTTAGTTGAGTTATTTTCTTTCATGTCAACATATTATTCACTAGAACAAGGCTTGAATCAATAGGTTTCAGTACATGGCTGTAGCTGATAACAGGCAGAGATTCATGCCGCTGCCCGATGATCGGTTATCTGGAAGATGCCAAACTTTGGCCTACCCCGAAGCCGTCTTACTTACTAATCCCAAGAACCCTCAACTCAAGGGTGAGGTACTCTTGGACAACTCTTCTCTCTTTAGGAAGTGGGCTGGTTCATTGATCTTTGCCTAGTGGGATGACTCAGGGTTTTTTACTGTACATGTTTTATCTTGATTTTCAAATTCAAGGTAGAGATGATTTCCAACTAGGTTTTGATAGAATCCACTTGCTTTCATATGATCATTTTTCGTTTAGGTGGATGACAAATACCAATACTCATGTGAAAACAAAGACTTAAAGGTCCATGGATGGATATGCACCAATCCACCCACCGGGTTTTGGCAGATTACACCCAGTGATGAGTTTCGGTCAGGCGGACCTCTTAAGCAAAGTCTAACATCACATGTGGGACCTACAACCCTTGCTGTAGGTGACCCAACACCACTAATCATATTAGTTTCTTTAATTGTCTTGCACATTGATGTACCATGAATTCTGGAGACCTTGTGTAACAAGTAGGAGTTCTGGTGATTCTCATTTTTCATTTTTACTTGCTCTTTTAGATATTTCTTAGTGCTCATTATGCGGGACAAGATTTGGTGCCAAAATTTAGAGCCGGTGAGCCATGGAAGAAGGTTTTTGGCCCTGTTTTTCTCTATTTTAATTCCACGTCAGTTGGAGATGACCCATTTTGGTTATGGGAGGATGCTAAAATACAGGTTTGATGCATTAAGACACTCACATTTTTTCCTTTTATGGATGACACTGTGTCAAGACACACAATTAATTATATGATTACCAGATGATGACGGAAGTTCAAAGTTGGCCTTATAGTTTCCCTGCATCTGAGGATTTCCCGAAAGTGGATCAACGGGGTACTGTTAGTGGTAGACTACTGGTTTTTGACAGGTAGGCATTTTATACTCGTAAATGTCCCTTAAGAAACATTTTTATGACATTCCTAAACTTTATTTCATATTTCATTCTTAAGATTTCTATAAAAGCTTAAAAGATAAAAATGTTACTTCAGTGAACATTTTGTTAAGATAGAAATTTGGAAAGAGAATTCAAGAAACCATACCCCTACTTTTGTAAAACTTAAGAAAAGAAAAGGAATGGATTACACCAACTTTTCAAAAACTTTAAATGAAAAACGATAAACAAGAAACATGATGTTATTAATTAGAACCTCAATTTGTTTAATTTTCTGGCTTAGTTTATGTGCTTGGACCTTTGTAATCAAAATGTCTAGGTATGTTAGTCAAGACTATCTGCCTGCCAGTGGAGCCTTTGTAGGATTGTCTGCACCAGGAGAAGTAGGGTCATGGCAGAGAGAATGCAAGGTGATTAACTTTTTGTTTCAATTCCATAACGAATATGATAGTGAAGTAAAGACTATCCATTATTGTCTACCACCAAATGAAAATCAAATGGCCGCCCCCTTAATTTCACGAATGAAGGTCAAAGTCAAACCTGTAATTTTACAATTTTTTTAGCATATTAGTTTTTCGTTGCTAGAACGACAGGATATTGCACCAGCAATTAAATGATGGACCCATGTCCTATGATATCATTAAGATAGCTGTTTGATTTTCACACACTTGAAAATTTTCATTGTTGAGCTGAATATTTATTGTCTTTTAAATCCAAGATAGTGAAGCTTATCTTATAAAGAGATACTTCATTGCGCATGTGTTATATTTCTGGGATTTGATTGAACAACTTTCTAAATTTCCAAATATTTCTAATACCTATAAAAGACGTGTTATAGCCCAGAAGTATAGACATCCTCTTATTGACATTAAGGGAAAGGATATAAAATCCACAGATGTTTGAAGGTTTGTATCTCGCTCTCTCTAATGAACTAGAAAAAGACTCTTCTAACTTTGCTTGCAGATTGTACCACTTTTTCTTACTATATAATTTCCCCACCCTTTATCAGTTATCTAACTCCACATTCTTCTGTTGACTTCACTATAACGAACTACTTATAGCAAAAGACTATCCTGCCCTCCCTGGGACCACCCTAACTTACCACAGTCTACTAACCCTCGGAATTATACTGAAATATAAGAGGATACAAGAATATAACAACTCCCCAAGTATTTGAGGTACTTAGTTGAGTATTCTCAAGCCTAAACCTACTAAATTGTTGCCTACCTTCCTCTCCCCTCGCTTACTCTATTTATAATCAATTCCTACTAATAAGCTCCTTGGGGTTATTACTAATTTGCCCTAATACCTTAATAATATTTCTAACTACCCGAGTAGCATTCCTAACACCCTCCTTAGCTTTATGTTTCATCCCCCTAGGATAAGGAAAGCGAATAAGTGGTCTCGTGTTTCTATCAAGATGGTATTAAAAAAATTAGCCAAGTAATATGGTGGAAGAATGAACATAAAGCTCCTTTTGTTCTAGACTTTCCTCATTTATGAATGGTCAAGCTTAAATGGGAAGAATAAATTTATTTCACTCTTTGAGACTCAAACCTTTTAACAACATTTTATTCTACGAACCCTTAATATTATCTGGAAGGTTAAATCACATGTATGCTTTAAAAGAATGTACCCTTCTTGTCAGGGATATCAATTCTGGACTAGAGCAGATGATGGTGGTTATTTTACCATCAACCACATACACGCTGGCGACTATAATCTATATGCGTGGGTCCACGGCTTTATTGGAGATTATCGTTGTGATGCTCTCATTAACATAAACCAAGGTATCATTTCCTGTATCTGTAATGATCCTTCAATTTCTCTGTACACAATTATAGTATCCCAAGTTGAAAAGCAGGATCTTGCATTGAAATGGGCGACCTCGTATATGAACCTCCAAGAGATGGGCCCACACTTTGGGAAATAGGCATTCCTGATCGCTCTGCATCTGAGTTCTATGCTCCTGATCCTAACCCGATACATATTAATAACCTCTTTGTAAACCATCCAGACAGGTAGCCCTTTTTCAGTTTTTCTATAATTCATGATTTAAATGAACATGAACTTGATTATTATGGTCCATTTTTACAGTTTCTTTCACAGTGCTTCTAAATAGAAATTTGAGTTCTGTTACTGAGGATTGCAAAGTGTTAGTGGCAAATCAATAATTTCTGTAGAACTTGAGGGATCCAAGTCCAACTAAAGCTAAAATCTCTACCATTTATGCTATGAAGGTTCCGGCAATATGGATTGTGGGACAGATATGCTGAATTATACCCTGACGAGGATTTAGTATACACAGTTGGCACAAGCGATTATAGTAAAGATTGGTTCTTCGCTCAGGTCCCAAGGTAACATCTCTTTTGCTATCCATTGCCTCCAACCAAGGACAACACCGACTGATAATAATCGTCTTTAAACCCACAGCTGTTTCTTCTCTTTATTAATGGCTATGGTCGTTATATGATCATAAACATGTCTTGTATTTGTCAACTATAACATGTATTTCAGGAAGACAAACAGTAACGCGCATCAAGGAACTACTTGGCAAATCAAATTCAAACTCGATAGTGTGGATCACAAGAGTATGTATATGCTACGAGTCGCGATTGCATCTGCAACTCTTGCTGAATTGCAGGTAAGATGCTATACTATTAGCAATAACATAAAATGCTTAACATTTCCTAAATTATTTGTTTCTCTCTTTTGCTTTCCCTCTTTAGGTCCGGATTAATGACCCGAGATCAAAGCGACCTCTGTTTACGAGTGGGTTGATAGGGAGGGACAACTCAATTGCTAGACATGGAATTCATGGACTTTATTGGCTTTACAGCGTGGGGATAGCAGGCTCTCATCTTGTTGAAGGAGATAACACGATCTTCTTGACTCAGCCACGCTGCACCAGCCCTTTCCAAGGTATCATGTATGATTACATCCGTCTGGAAGGTCCCCCAACTATGTGA

mRNA sequence

ATGTCATCCACGGGGGTGCGGTTGCAGATACGAGATCGTCATGTGGTGGTGGATAATGGAATACTGCAACTAACTTTATCAAAACCAGACGGAATTGTCACTGGCATACGATATAATGGCGTTGACAATCTGCTTGAAGTTCTTAACCCTGAACATAACAGAGGGTACTGGGACCTTGTTTGGAATTCTCCAGGAAGCAAAGGAATATTTGACGTGATTAAGGGATCAAGTTTTAGGGTTGTAGTGGAAAATGAGGAACGGGTAGAGCTTTCTTTTATGAGGATGTGGGAGCCCTCCCTCGAGGGCAAGTTTGTTCCTTTGAACATAGACAAAAGGTTCATAGTGCTACGTGGTTCCTCTGGATTCTACTCTTATGCAATCTATGAGCACTTGAAGGATTGGCCTGATTTTGATCTTGGTGAAACCAGGATCACTTTTAAGCTCAGAAAAGACAAGTTTCAGTACATGGCTGTAGCTGATAACAGGCAGAGATTCATGCCGCTGCCCGATGATCGGTTATCTGGAAGATGCCAAACTTTGGCCTACCCCGAAGCCGTCTTACTTACTAATCCCAAGAACCCTCAACTCAAGGGTGAGGTGGATGACAAATACCAATACTCATGTGAAAACAAAGACTTAAAGGTCCATGGATGGATATGCACCAATCCACCCACCGGGTTTTGGCAGATTACACCCAGTGATGAGTTTCGGTCAGGCGGACCTCTTAAGCAAAGTCTAACATCACATGTGGGACCTACAACCCTTGCTATATTTCTTAGTGCTCATTATGCGGGACAAGATTTGGTGCCAAAATTTAGAGCCGGTGAGCCATGGAAGAAGGTTTTTGGCCCTGTTTTTCTCTATTTTAATTCCACGTCAGTTGGAGATGACCCATTTTGGTTATGGGAGGATGCTAAAATACAGATGATGACGGAAGTTCAAAGTTGGCCTTATAGTTTCCCTGCATCTGAGGATTTCCCGAAAGTGGATCAACGGGGTACTGTTAGTGGTAGACTACTGGTTTTTGACAGGTATGTTAGTCAAGACTATCTGCCTGCCAGTGGAGCCTTTGTAGGATTGTCTGCACCAGGAGAAGTAGGGTCATGGCAGAGAGAATGCAAGGGATATCAATTCTGGACTAGAGCAGATGATGGTGGTTATTTTACCATCAACCACATACACGCTGGCGACTATAATCTATATGCGTGGGTCCACGGCTTTATTGGAGATTATCGTTGTGATGCTCTCATTAACATAAACCAAGGATCTTGCATTGAAATGGGCGACCTCGTATATGAACCTCCAAGAGATGGGCCCACACTTTGGGAAATAGGCATTCCTGATCGCTCTGCATCTGAGTTCTATGCTCCTGATCCTAACCCGATACATATTAATAACCTCTTTGTAAACCATCCAGACAGGTTCCGGCAATATGGATTGTGGGACAGATATGCTGAATTATACCCTGACGAGGATTTAGTATACACAGTTGGCACAAGCGATTATAGTAAAGATTGGTTCTTCGCTCAGGTCCCAAGGAAGACAAACAGTAACGCGCATCAAGGAACTACTTGGCAAATCAAATTCAAACTCGATAGTGTGGATCACAAGAGTATGTATATGCTACGAGTCGCGATTGCATCTGCAACTCTTGCTGAATTGCAGGTCCGGATTAATGACCCGAGATCAAAGCGACCTCTGTTTACGAGTGGGTTGATAGGGAGGGACAACTCAATTGCTAGACATGGAATTCATGGACTTTATTGGCTTTACAGCGTGGGGATAGCAGGCTCTCATCTTGTTGAAGGAGATAACACGATCTTCTTGACTCAGCCACGCTGCACCAGCCCTTTCCAAGGTATCATGTATGATTACATCCGTCTGGAAGGTCCCCCAACTATGTGA

Coding sequence (CDS)

ATGTCATCCACGGGGGTGCGGTTGCAGATACGAGATCGTCATGTGGTGGTGGATAATGGAATACTGCAACTAACTTTATCAAAACCAGACGGAATTGTCACTGGCATACGATATAATGGCGTTGACAATCTGCTTGAAGTTCTTAACCCTGAACATAACAGAGGGTACTGGGACCTTGTTTGGAATTCTCCAGGAAGCAAAGGAATATTTGACGTGATTAAGGGATCAAGTTTTAGGGTTGTAGTGGAAAATGAGGAACGGGTAGAGCTTTCTTTTATGAGGATGTGGGAGCCCTCCCTCGAGGGCAAGTTTGTTCCTTTGAACATAGACAAAAGGTTCATAGTGCTACGTGGTTCCTCTGGATTCTACTCTTATGCAATCTATGAGCACTTGAAGGATTGGCCTGATTTTGATCTTGGTGAAACCAGGATCACTTTTAAGCTCAGAAAAGACAAGTTTCAGTACATGGCTGTAGCTGATAACAGGCAGAGATTCATGCCGCTGCCCGATGATCGGTTATCTGGAAGATGCCAAACTTTGGCCTACCCCGAAGCCGTCTTACTTACTAATCCCAAGAACCCTCAACTCAAGGGTGAGGTGGATGACAAATACCAATACTCATGTGAAAACAAAGACTTAAAGGTCCATGGATGGATATGCACCAATCCACCCACCGGGTTTTGGCAGATTACACCCAGTGATGAGTTTCGGTCAGGCGGACCTCTTAAGCAAAGTCTAACATCACATGTGGGACCTACAACCCTTGCTATATTTCTTAGTGCTCATTATGCGGGACAAGATTTGGTGCCAAAATTTAGAGCCGGTGAGCCATGGAAGAAGGTTTTTGGCCCTGTTTTTCTCTATTTTAATTCCACGTCAGTTGGAGATGACCCATTTTGGTTATGGGAGGATGCTAAAATACAGATGATGACGGAAGTTCAAAGTTGGCCTTATAGTTTCCCTGCATCTGAGGATTTCCCGAAAGTGGATCAACGGGGTACTGTTAGTGGTAGACTACTGGTTTTTGACAGGTATGTTAGTCAAGACTATCTGCCTGCCAGTGGAGCCTTTGTAGGATTGTCTGCACCAGGAGAAGTAGGGTCATGGCAGAGAGAATGCAAGGGATATCAATTCTGGACTAGAGCAGATGATGGTGGTTATTTTACCATCAACCACATACACGCTGGCGACTATAATCTATATGCGTGGGTCCACGGCTTTATTGGAGATTATCGTTGTGATGCTCTCATTAACATAAACCAAGGATCTTGCATTGAAATGGGCGACCTCGTATATGAACCTCCAAGAGATGGGCCCACACTTTGGGAAATAGGCATTCCTGATCGCTCTGCATCTGAGTTCTATGCTCCTGATCCTAACCCGATACATATTAATAACCTCTTTGTAAACCATCCAGACAGGTTCCGGCAATATGGATTGTGGGACAGATATGCTGAATTATACCCTGACGAGGATTTAGTATACACAGTTGGCACAAGCGATTATAGTAAAGATTGGTTCTTCGCTCAGGTCCCAAGGAAGACAAACAGTAACGCGCATCAAGGAACTACTTGGCAAATCAAATTCAAACTCGATAGTGTGGATCACAAGAGTATGTATATGCTACGAGTCGCGATTGCATCTGCAACTCTTGCTGAATTGCAGGTCCGGATTAATGACCCGAGATCAAAGCGACCTCTGTTTACGAGTGGGTTGATAGGGAGGGACAACTCAATTGCTAGACATGGAATTCATGGACTTTATTGGCTTTACAGCGTGGGGATAGCAGGCTCTCATCTTGTTGAAGGAGATAACACGATCTTCTTGACTCAGCCACGCTGCACCAGCCCTTTCCAAGGTATCATGTATGATTACATCCGTCTGGAAGGTCCCCCAACTATGTGA

Protein sequence

MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPTM

Homology

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BLAST of Moc11g07040 vs. NCBI nr
Match: XP_038897922.1 (probable rhamnogalacturonate lyase B [Benincasa hispida])

HSP 1 Score: 1277.7 bits (3305), Expect = 0.0e+00
Identity = 587/633 (92.73%), Postives = 607/633 (95.89%), Query Frame = 0


Query: 1   MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLV 60
           MSS GVRLQIRD HVVV+NGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWDLV
Sbjct: 1   MSSRGVRLQIRDHHVVVENGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRGYWDLV 60

Query: 61  WNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSS 120
           WNSPGSKGIFDVIKGSSFRV+VENEE+VELSFMRMW+PSLEGK VPLNIDKRFIVLRGSS
Sbjct: 61  WNSPGSKGIFDVIKGSSFRVIVENEEQVELSFMRMWDPSLEGKLVPLNIDKRFIVLRGSS 120

Query: 121 GFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTL 180
           GFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQ+ MPLPDDRLSGRCQTL
Sbjct: 121 GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQKVMPLPDDRLSGRCQTL 180

Query: 181 AYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGG 240
           AYPEAVLLTNPKNP+LKGEVDDKYQYSCENKDLKVHGWICTNPPTGFW ITPSDEFRSGG
Sbjct: 181 AYPEAVLLTNPKNPELKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWHITPSDEFRSGG 240

Query: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW 300
           PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVF Y NSTSVGDDPFW
Sbjct: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFFYLNSTSVGDDPFW 300

Query: 301 LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGL 360
           LWEDAKIQMM EV+SWPYSFPASEDFPKVDQRG V GRLLV DRYVSQDYLPASGAFVG+
Sbjct: 301 LWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGVVRGRLLVLDRYVSQDYLPASGAFVGI 360

Query: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININ 420
           SAPGEVGSWQRECKGYQFWTRADDGGYFTINH H GDYNLY+WV GFIGDYRCDALIN+N
Sbjct: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHAHTGDYNLYSWVPGFIGDYRCDALINVN 420

Query: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGL 480
           QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNP HIN LFVNHPDRFRQYGL
Sbjct: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPTHINKLFVNHPDRFRQYGL 480

Query: 481 WDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMY 540
           WDRYAELYP+EDLVYTVGTSDYSKDWFFAQVPRKT SN+H+GTTWQIKF L+ V  KSMY
Sbjct: 481 WDRYAELYPNEDLVYTVGTSDYSKDWFFAQVPRKTKSNSHEGTTWQIKFYLNRVARKSMY 540

Query: 541 MLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL 600
            LRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YWLYSVG+ G HL
Sbjct: 541 TLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGIHGIYWLYSVGVGGCHL 600

Query: 601 VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT 634
           VEG+NTIFLTQPRCTSPFQGIMYDYIRLEGPPT
Sbjct: 601 VEGENTIFLTQPRCTSPFQGIMYDYIRLEGPPT 633

[Close]

BLAST of Moc11g07040 vs. NCBI nr
Match: XP_004136250.1 (probable rhamnogalacturonate lyase B isoform X1 [Cucumis sativus] >KGN60276.1 hypothetical protein Csa_001404 [Cucumis sativus])

HSP 1 Score: 1265.0 bits (3272), Expect = 0.0e+00
Identity = 581/633 (91.79%), Postives = 604/633 (95.42%), Query Frame = 0


Query: 1   MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLV 60
           MSS  VRLQIRD HVVVDNGILQLTLSKPDGI+TG+RYNGVDNLLEVLNPE NRGYWDLV
Sbjct: 1   MSSRAVRLQIRDHHVVVDNGILQLTLSKPDGIITGVRYNGVDNLLEVLNPESNRGYWDLV 60

Query: 61  WNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSS 120
           WNSPGSKG+FDVIKGS FRV+VENEE+VELSF+RMW+PSLEGKFVPLNIDKRFIVLRGSS
Sbjct: 61  WNSPGSKGVFDVIKGSRFRVIVENEEQVELSFVRMWDPSLEGKFVPLNIDKRFIVLRGSS 120

Query: 121 GFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTL 180
           GFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL
Sbjct: 121 GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTL 180

Query: 181 AYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGG 240
           AYPEAVLLTNPKNP LKGEVDDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGG
Sbjct: 181 AYPEAVLLTNPKNPALKGEVDDKYQYSCENNNLKVHGWISTNPPTGFWQITPSDEFRSGG 240

Query: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW 300
           PLKQSLTSHVGPTTLAIFLS HYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFW
Sbjct: 241 PLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPVFLYLNSTSVGDDPFW 300

Query: 301 LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGL 360
           LWEDAKIQMM EV SWPYSFPASEDFPK DQRG VSGRLLVFDRYV QDYLPA GAFVGL
Sbjct: 301 LWEDAKIQMMAEVDSWPYSFPASEDFPKKDQRGIVSGRLLVFDRYVDQDYLPACGAFVGL 360

Query: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININ 420
           SAPGE GSWQRECKGYQFWTRADDGGYFTINH+H G+YNLYAWV GFIGDYRCDALIN++
Sbjct: 361 SAPGEAGSWQRECKGYQFWTRADDGGYFTINHVHTGEYNLYAWVPGFIGDYRCDALINVS 420

Query: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGL 480
           QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPIHIN LFV+HPDRFRQYGL
Sbjct: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVDHPDRFRQYGL 480

Query: 481 WDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMY 540
           W+RYAELYP+EDLVYTVGTSDY KDWFFA VPRKTN N+H+GTTWQIKFKLD VDHKSMY
Sbjct: 481 WNRYAELYPNEDLVYTVGTSDYRKDWFFAHVPRKTN-NSHEGTTWQIKFKLDRVDHKSMY 540

Query: 541 MLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL 600
            LRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+Y VG+AG HL
Sbjct: 541 TLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGIHGIYWVYGVGVAGCHL 600

Query: 601 VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT 634
           VEG+NTIFLTQPRCTSPFQGIMYDYIRLEGPPT
Sbjct: 601 VEGENTIFLTQPRCTSPFQGIMYDYIRLEGPPT 632

[Close]

BLAST of Moc11g07040 vs. NCBI nr
Match: XP_008466137.1 (PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo] >KAA0038653.1 putative rhamnogalacturonate lyase B isoform X1 [Cucumis melo var. makuwa] >TYK31256.1 putative rhamnogalacturonate lyase B isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1263.1 bits (3267), Expect = 0.0e+00
Identity = 582/633 (91.94%), Postives = 604/633 (95.42%), Query Frame = 0


Query: 1   MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLV 60
           MSS  VRLQIRD HVVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWDLV
Sbjct: 1   MSSKAVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRGYWDLV 60

Query: 61  WNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSS 120
           WNSPGSKGIFDVIKGS F V+VENEE+VELSF+RMW+PSLEGKFVPLNIDKRFIVLRGSS
Sbjct: 61  WNSPGSKGIFDVIKGSRFSVIVENEEQVELSFVRMWDPSLEGKFVPLNIDKRFIVLRGSS 120

Query: 121 GFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTL 180
           GFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL
Sbjct: 121 GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTL 180

Query: 181 AYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGG 240
           AYPEAVLLT+PKN  LKGEVDDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGG
Sbjct: 181 AYPEAVLLTDPKNSALKGEVDDKYQYSCENNNLKVHGWISTNPPTGFWQITPSDEFRSGG 240

Query: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW 300
           PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFW
Sbjct: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYLNSTSVGDDPFW 300

Query: 301 LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGL 360
           LWEDAKIQMM EV+SWPYSFPASEDF K DQRG VSGRLLVFDRYV QDYLP SGAFVGL
Sbjct: 301 LWEDAKIQMMAEVESWPYSFPASEDFSKKDQRGMVSGRLLVFDRYVDQDYLPGSGAFVGL 360

Query: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININ 420
           SAPGEVGSWQRECKGYQFWTRADDGGYFTINH+  GDYNLYAWV GFIGDYRCDAL+N++
Sbjct: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHVLTGDYNLYAWVPGFIGDYRCDALVNVS 420

Query: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGL 480
           QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPI+IN LFVNHPDRFRQYGL
Sbjct: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIYINKLFVNHPDRFRQYGL 480

Query: 481 WDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMY 540
           WDRYAELYPDEDLVYTVGTSDY KDWFFA VPRKTNSN+H+GTTWQIKF+LD VD KSMY
Sbjct: 481 WDRYAELYPDEDLVYTVGTSDYRKDWFFAHVPRKTNSNSHEGTTWQIKFQLDRVDRKSMY 540

Query: 541 MLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL 600
           MLRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+YSV +AG HL
Sbjct: 541 MLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGIHGIYWVYSVSVAGCHL 600

Query: 601 VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT 634
           VEG+NTIFLTQPRCTSPFQGIMYDYIRLEGPPT
Sbjct: 601 VEGENTIFLTQPRCTSPFQGIMYDYIRLEGPPT 633

[Close]

BLAST of Moc11g07040 vs. NCBI nr
Match: XP_022940913.1 (probable rhamnogalacturonate lyase B isoform X1 [Cucurbita moschata])

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 567/633 (89.57%), Postives = 595/633 (94.00%), Query Frame = 0


Query: 1   MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLV 60
           MSS GVRLQIRD HVVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWD+V
Sbjct: 1   MSSRGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRGYWDIV 60

Query: 61  WNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSS 120
           WNSPGS+GIFDVIKGSSFRV+VENEE+VELSF RMW+PSLEGK VPLNIDKRFIVLRGSS
Sbjct: 61  WNSPGSQGIFDVIKGSSFRVIVENEEQVELSFTRMWDPSLEGKVVPLNIDKRFIVLRGSS 120

Query: 121 GFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTL 180
           GFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL
Sbjct: 121 GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRLMPLPDDRLSGRCQTL 180

Query: 181 AYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGG 240
            +PEAVLLTNPKNP+ + EVDDKYQYSC+NKDLKVHGWI TNPP GFWQITPSDEFRSGG
Sbjct: 181 GFPEAVLLTNPKNPEHRDEVDDKYQYSCQNKDLKVHGWISTNPPIGFWQITPSDEFRSGG 240

Query: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW 300
           P KQSLTSHVGPTTLAIFLS HYAGQDLVPKFR GEPWKKVFGPVFLY NST  GDDPFW
Sbjct: 241 PHKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRNGEPWKKVFGPVFLYLNSTKAGDDPFW 300

Query: 301 LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGL 360
           LWEDAKIQMM EVQSWPYSFPAS+DFPK+DQRGT+SGRLLVFDRY+S+DYLPA GAFVGL
Sbjct: 301 LWEDAKIQMMAEVQSWPYSFPASDDFPKLDQRGTISGRLLVFDRYMSRDYLPAGGAFVGL 360

Query: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININ 420
           SAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YNLYAWV GFIGDYRCDALINI+
Sbjct: 361 SAPGEVGSWQRECKGYQFWTRADDRGYFIINHVHIGQYNLYAWVPGFIGDYRCDALINIS 420

Query: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGL 480
           QGS IE+GDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNP+HIN LFVNHP+RFRQYGL
Sbjct: 421 QGSSIELGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPLHINKLFVNHPERFRQYGL 480

Query: 481 WDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMY 540
           W+RYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTN N+HQGTTW+I FKLD VD K+ Y
Sbjct: 481 WERYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNDNSHQGTTWKIAFKLDRVDRKNRY 540

Query: 541 MLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL 600
           MLRVAIASATLAELQ+R+NDP SKRPLFTSGLIGRDNSIARHGIHG+YWLYSVGIAG HL
Sbjct: 541 MLRVAIASATLAELQIRVNDPSSKRPLFTSGLIGRDNSIARHGIHGIYWLYSVGIAGLHL 600

Query: 601 VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT 634
           VEGDN IF TQPRCTSPFQGIMYDYIRLE P T
Sbjct: 601 VEGDNAIFFTQPRCTSPFQGIMYDYIRLEAPST 633

[Close]

BLAST of Moc11g07040 vs. NCBI nr
Match: XP_022980958.1 (probable rhamnogalacturonate lyase B [Cucurbita maxima])

HSP 1 Score: 1236.5 bits (3198), Expect = 0.0e+00
Identity = 568/633 (89.73%), Postives = 596/633 (94.15%), Query Frame = 0


Query: 1   MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLV 60
           MSS GVRLQIRD HVVVDNGILQLTLSKPDGI+TGI YNGVDNLLEVLNPE NRGYWD+V
Sbjct: 1   MSSRGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIHYNGVDNLLEVLNPESNRGYWDIV 60

Query: 61  WNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSS 120
           WNSPGS+GIFDVIKGSSFRV+VENEE+VELSF RMW+PSLEGK VPLNIDKRFIVLRGSS
Sbjct: 61  WNSPGSQGIFDVIKGSSFRVIVENEEQVELSFTRMWDPSLEGKVVPLNIDKRFIVLRGSS 120

Query: 121 GFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTL 180
           GFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL
Sbjct: 121 GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRLMPLPDDRLSGRCQTL 180

Query: 181 AYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGG 240
            +PEAVLLTNPKNP+ + EVDDKYQYSCENKDLKVHGWI  NPP GFWQITPSDEFRSGG
Sbjct: 181 GFPEAVLLTNPKNPEHRDEVDDKYQYSCENKDLKVHGWISNNPPIGFWQITPSDEFRSGG 240

Query: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW 300
           P KQSLTSHVGPTTLAIFLS HYAGQDLVPKFR GEPWKKVFGPVFLY NST  GDDPFW
Sbjct: 241 PHKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRNGEPWKKVFGPVFLYLNSTKAGDDPFW 300

Query: 301 LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGL 360
           LWEDAKIQMM EVQSWPYSFPAS++FPK+DQRGT+SGRLLVFDRY+S+DYLPASGAFVGL
Sbjct: 301 LWEDAKIQMMAEVQSWPYSFPASDNFPKLDQRGTISGRLLVFDRYMSRDYLPASGAFVGL 360

Query: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININ 420
           SAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YNLYAWV GFIGDYRCDALINI+
Sbjct: 361 SAPGEVGSWQRECKGYQFWTRADDRGYFIINHVHIGQYNLYAWVPGFIGDYRCDALINIS 420

Query: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGL 480
           QGS IE+G+LVYEPPRDGPTLWEIGIPDRSASEFY PDPNP+HIN LFVNHP+RFRQYGL
Sbjct: 421 QGSSIELGNLVYEPPRDGPTLWEIGIPDRSASEFYIPDPNPMHINKLFVNHPERFRQYGL 480

Query: 481 WDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMY 540
           W+RYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTN+N+HQGTTW+I FKLD VD KS Y
Sbjct: 481 WERYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNNNSHQGTTWKIAFKLDRVDRKSRY 540

Query: 541 MLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL 600
           MLRVAIASATLAELQVR+NDP SKRPLFTSGLIGRDNSIARHGIHG+YWLYSVGIAG HL
Sbjct: 541 MLRVAIASATLAELQVRVNDPSSKRPLFTSGLIGRDNSIARHGIHGIYWLYSVGIAGLHL 600

Query: 601 VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT 634
           VEGDN IF TQPRCTSPFQGIMYDYIRLEGP T
Sbjct: 601 VEGDNAIFFTQPRCTSPFQGIMYDYIRLEGPST 633

[Close]

BLAST of Moc11g07040 vs. ExPASy Swiss-Prot
Match: Q5AZ85 (Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rglB PE=2 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 1.4e-20
Identity = 150/672 (22.32%), Postives = 248/672 (36.90%), Query Frame = 0


Query: 12  DRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFD 71
           D  +V++N  L+ T  K  G +  +  +G D L           Y D      G      
Sbjct: 26  DTSIVLENDRLRATFDKGRGSIIDLYLDGQDFLGPQSGSTGIGPYLDCYCTPSG------ 85

Query: 72  VIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNID-KRFIVLR-GSSGFYSYAIYE 131
                S   V E  +  + +  +     L   + P   + +++  LR G +GF+ ++   
Sbjct: 86  FYTAGSTNPVTELVQGTDSTGTKYAGIILNDTYTPTGQEFQQYWFLRDGETGFHMFSRLA 145

Query: 132 HLKDWPDF--DLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVL 191
           +  +   F  +L E R  F+   D + ++  +D   +  PLP D      Q +       
Sbjct: 146 YYNETTPFLRNLQELRTLFRPNTDLWTHLTSSD--LQTAPLPSDEAIAE-QIVVQDATWR 205

Query: 192 LTNPKNP---QLKGEVDDKYQYSCENKDLKVHGWICTNPPT-----GFWQITPSDEFRSG 251
           L N  +    Q   E   KY +S   +D  VHG       +     G W +  + +   G
Sbjct: 206 LNNTPDDAYYQQFSEYFTKYTFSNHWRDNDVHGLYADGSTSDGTTYGAWLVMNTKDTYYG 265

Query: 252 GPLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPF 311
           GPL   LT  V        +S H+   +  P    G  + + FGP F  FN    G    
Sbjct: 266 GPLHSDLT--VDGIIYNYIVSNHHG--EGTPNITNG--FDRTFGPQFYLFN----GGGSS 325

Query: 312 WLWEDAKIQMMTEVQSWPYSFPAS-----EDFPKVDQRGTVSGRLLVFDRYVSQDYLP-- 371
            L E           SW   F  S       +    QRG+V G +           LP  
Sbjct: 326 SLEELRDEARSLASPSWNADFYDSIAKHVIGYVPSSQRGSVKGTI----------KLPKN 385

Query: 372 ASGAFVGLSAPGEVGSWQREC-KGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDY 431
           A      L+  G            +Q+W   D  G F+I+ + AG Y L  +  G  GD+
Sbjct: 386 AKSPIAVLTVDGHYFQDNSAVPSSHQYWADIDKNGRFSIDRVVAGKYRLTVYADGIFGDF 445

Query: 432 RCDAL-ININQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF-YAPDPNPIHINNLFV 491
             D + +   + + I+     ++P   G  +W +G PD+S+ EF +    +P H      
Sbjct: 446 TRDGIVVKARKSTSIKE---TWKPESAGTEIWRLGTPDKSSGEFRHGAARDPTH-----P 505

Query: 492 NHPDRFRQY-GLWDRYAELYPDEDLVYTVGTSDYSKDW------FFAQVPRKTNSNAHQG 551
            HP  +  Y G +D  ++     D  Y +G SD + D+       F   P    + ++  
Sbjct: 506 RHPPEYLIYWGAYDWQSDFPGGID--YMIGESDPATDFNTVHWAVFGPTPDNPVAESNTT 565

Query: 552 TTWQIKFKLDS--VDHKSMYMLRVAIASATLAELQVRI---NDPRSKRPLFT-------- 611
             W+I+F L +  +  +    L + +A A  A     +   ++P +  PL +        
Sbjct: 566 HDWRIRFDLSAKQLHARKTATLTIQLAGAKAASGNTDVYNASEPYANLPLRSYINEQEEP 625

Query: 612 -SGLIGRDNS---IARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRCTSPFQG----- 630
            + +IG D S   I R  +             S L EG N + L+ P   + ++      
Sbjct: 626 LTMVIGYDQSSSCIVRSAVSCYQVREKWEFPASWLKEGSNLLRLSLPTNGTNYESAVLPT 658

[Close]

BLAST of Moc11g07040 vs. ExPASy Swiss-Prot
Match: A5ABH4 (Probable rhamnogalacturonate lyase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rglB PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.5e-19
Identity = 99/376 (26.33%), Postives = 153/376 (40.69%), Query Frame = 0


Query: 203 KYQYSCENKDLKVHGWIC----TNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAI 262
           KY +S   +D  VHG       +N  T G W +  + +   GGPL   LT  V       
Sbjct: 216 KYTFSNAWRDNSVHGMYADGSTSNGSTFGAWLVMNTKDTYYGGPLHSDLT--VDGIVYNY 275

Query: 263 FLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ-SW 322
            +S H+   +  P    G  + + FGP + +FN    G       ++ K    T    SW
Sbjct: 276 LVSNHHG--EGTPNITYG--FDRTFGPQYYHFNG---GKGSTASLQELKSDAETLADPSW 335

Query: 323 PYSFPAS-----EDFPKVDQRGTVSGRLLVFDRYVSQDYLP--ASGAFVGLSAPGEVGSW 382
              F  S       +    QRG+V G++           LP  A+     L+  G+    
Sbjct: 336 NVDFYDSIAKHVVGYTPSSQRGSVQGKI----------KLPKGATRPIAVLTVDGQYFQD 395

Query: 383 QR-ECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININQGSCIEMG 442
                  YQ+W   DD G+F+++H+  G Y L  +  G  GD+  D  + +  G    + 
Sbjct: 396 NSVNSSSYQYWAEIDDSGHFSVDHVKEGPYRLTVYADGIFGDFVRDG-VQVKAGKKTTIQ 455

Query: 443 DLVYEPPRDGPTLWEIGIPDRSASEF---YAPDP-NPIHINNLFVNHPDRFRQYGLWDRY 502
           +  +E    G  +W +G PD+S+ EF    A DP +P+H        P+    +G +D  
Sbjct: 456 E-TWEAESAGTEIWRLGTPDKSSGEFRHGVARDPTHPLH-------PPEYLIYWGAYDWQ 515

Query: 503 AELYPDEDLVYTVGTSDYSKD-----W-FFAQVPRKTNSNAHQGTTWQIKFKL--DSVDH 553
           ++ +PD  + YT+GTSD + D     W  F   P            W I F L  D +  
Sbjct: 516 SD-FPD-GINYTIGTSDPATDLNTVHWSVFGPTPNDPRVEYDTTHDWTINFPLSEDDLAE 561

[Close]

BLAST of Moc11g07040 vs. ExPASy TrEMBL
Match: A0A0A0LJQ9 (Rhamnogalacturonan endolyase OS=Cucumis sativus OX=3659 GN=Csa_3G892770 PE=3 SV=1)

HSP 1 Score: 1265.0 bits (3272), Expect = 0.0e+00
Identity = 581/633 (91.79%), Postives = 604/633 (95.42%), Query Frame = 0


Query: 1   MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLV 60
           MSS  VRLQIRD HVVVDNGILQLTLSKPDGI+TG+RYNGVDNLLEVLNPE NRGYWDLV
Sbjct: 1   MSSRAVRLQIRDHHVVVDNGILQLTLSKPDGIITGVRYNGVDNLLEVLNPESNRGYWDLV 60

Query: 61  WNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSS 120
           WNSPGSKG+FDVIKGS FRV+VENEE+VELSF+RMW+PSLEGKFVPLNIDKRFIVLRGSS
Sbjct: 61  WNSPGSKGVFDVIKGSRFRVIVENEEQVELSFVRMWDPSLEGKFVPLNIDKRFIVLRGSS 120

Query: 121 GFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTL 180
           GFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL
Sbjct: 121 GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTL 180

Query: 181 AYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGG 240
           AYPEAVLLTNPKNP LKGEVDDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGG
Sbjct: 181 AYPEAVLLTNPKNPALKGEVDDKYQYSCENNNLKVHGWISTNPPTGFWQITPSDEFRSGG 240

Query: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW 300
           PLKQSLTSHVGPTTLAIFLS HYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFW
Sbjct: 241 PLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPVFLYLNSTSVGDDPFW 300

Query: 301 LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGL 360
           LWEDAKIQMM EV SWPYSFPASEDFPK DQRG VSGRLLVFDRYV QDYLPA GAFVGL
Sbjct: 301 LWEDAKIQMMAEVDSWPYSFPASEDFPKKDQRGIVSGRLLVFDRYVDQDYLPACGAFVGL 360

Query: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININ 420
           SAPGE GSWQRECKGYQFWTRADDGGYFTINH+H G+YNLYAWV GFIGDYRCDALIN++
Sbjct: 361 SAPGEAGSWQRECKGYQFWTRADDGGYFTINHVHTGEYNLYAWVPGFIGDYRCDALINVS 420

Query: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGL 480
           QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPIHIN LFV+HPDRFRQYGL
Sbjct: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVDHPDRFRQYGL 480

Query: 481 WDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMY 540
           W+RYAELYP+EDLVYTVGTSDY KDWFFA VPRKTN N+H+GTTWQIKFKLD VDHKSMY
Sbjct: 481 WNRYAELYPNEDLVYTVGTSDYRKDWFFAHVPRKTN-NSHEGTTWQIKFKLDRVDHKSMY 540

Query: 541 MLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL 600
            LRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+Y VG+AG HL
Sbjct: 541 TLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGIHGIYWVYGVGVAGCHL 600

Query: 601 VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT 634
           VEG+NTIFLTQPRCTSPFQGIMYDYIRLEGPPT
Sbjct: 601 VEGENTIFLTQPRCTSPFQGIMYDYIRLEGPPT 632

[Close]

BLAST of Moc11g07040 vs. ExPASy TrEMBL
Match: A0A5D3E6J1 (Rhamnogalacturonan endolyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005450 PE=3 SV=1)

HSP 1 Score: 1263.1 bits (3267), Expect = 0.0e+00
Identity = 582/633 (91.94%), Postives = 604/633 (95.42%), Query Frame = 0


Query: 1   MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLV 60
           MSS  VRLQIRD HVVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWDLV
Sbjct: 1   MSSKAVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRGYWDLV 60

Query: 61  WNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSS 120
           WNSPGSKGIFDVIKGS F V+VENEE+VELSF+RMW+PSLEGKFVPLNIDKRFIVLRGSS
Sbjct: 61  WNSPGSKGIFDVIKGSRFSVIVENEEQVELSFVRMWDPSLEGKFVPLNIDKRFIVLRGSS 120

Query: 121 GFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTL 180
           GFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL
Sbjct: 121 GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTL 180

Query: 181 AYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGG 240
           AYPEAVLLT+PKN  LKGEVDDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGG
Sbjct: 181 AYPEAVLLTDPKNSALKGEVDDKYQYSCENNNLKVHGWISTNPPTGFWQITPSDEFRSGG 240

Query: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW 300
           PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFW
Sbjct: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYLNSTSVGDDPFW 300

Query: 301 LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGL 360
           LWEDAKIQMM EV+SWPYSFPASEDF K DQRG VSGRLLVFDRYV QDYLP SGAFVGL
Sbjct: 301 LWEDAKIQMMAEVESWPYSFPASEDFSKKDQRGMVSGRLLVFDRYVDQDYLPGSGAFVGL 360

Query: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININ 420
           SAPGEVGSWQRECKGYQFWTRADDGGYFTINH+  GDYNLYAWV GFIGDYRCDAL+N++
Sbjct: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHVLTGDYNLYAWVPGFIGDYRCDALVNVS 420

Query: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGL 480
           QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPI+IN LFVNHPDRFRQYGL
Sbjct: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIYINKLFVNHPDRFRQYGL 480

Query: 481 WDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMY 540
           WDRYAELYPDEDLVYTVGTSDY KDWFFA VPRKTNSN+H+GTTWQIKF+LD VD KSMY
Sbjct: 481 WDRYAELYPDEDLVYTVGTSDYRKDWFFAHVPRKTNSNSHEGTTWQIKFQLDRVDRKSMY 540

Query: 541 MLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL 600
           MLRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+YSV +AG HL
Sbjct: 541 MLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGIHGIYWVYSVSVAGCHL 600

Query: 601 VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT 634
           VEG+NTIFLTQPRCTSPFQGIMYDYIRLEGPPT
Sbjct: 601 VEGENTIFLTQPRCTSPFQGIMYDYIRLEGPPT 633

[Close]

BLAST of Moc11g07040 vs. ExPASy TrEMBL
Match: A0A1S3CQJ4 (Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103503644 PE=3 SV=1)

HSP 1 Score: 1263.1 bits (3267), Expect = 0.0e+00
Identity = 582/633 (91.94%), Postives = 604/633 (95.42%), Query Frame = 0


Query: 1   MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLV 60
           MSS  VRLQIRD HVVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWDLV
Sbjct: 1   MSSKAVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRGYWDLV 60

Query: 61  WNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSS 120
           WNSPGSKGIFDVIKGS F V+VENEE+VELSF+RMW+PSLEGKFVPLNIDKRFIVLRGSS
Sbjct: 61  WNSPGSKGIFDVIKGSRFSVIVENEEQVELSFVRMWDPSLEGKFVPLNIDKRFIVLRGSS 120

Query: 121 GFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTL 180
           GFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL
Sbjct: 121 GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTL 180

Query: 181 AYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGG 240
           AYPEAVLLT+PKN  LKGEVDDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGG
Sbjct: 181 AYPEAVLLTDPKNSALKGEVDDKYQYSCENNNLKVHGWISTNPPTGFWQITPSDEFRSGG 240

Query: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW 300
           PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLY NSTSVGDDPFW
Sbjct: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYLNSTSVGDDPFW 300

Query: 301 LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGL 360
           LWEDAKIQMM EV+SWPYSFPASEDF K DQRG VSGRLLVFDRYV QDYLP SGAFVGL
Sbjct: 301 LWEDAKIQMMAEVESWPYSFPASEDFSKKDQRGMVSGRLLVFDRYVDQDYLPGSGAFVGL 360

Query: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININ 420
           SAPGEVGSWQRECKGYQFWTRADDGGYFTINH+  GDYNLYAWV GFIGDYRCDAL+N++
Sbjct: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHVLTGDYNLYAWVPGFIGDYRCDALVNVS 420

Query: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGL 480
           QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNPI+IN LFVNHPDRFRQYGL
Sbjct: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIYINKLFVNHPDRFRQYGL 480

Query: 481 WDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMY 540
           WDRYAELYPDEDLVYTVGTSDY KDWFFA VPRKTNSN+H+GTTWQIKF+LD VD KSMY
Sbjct: 481 WDRYAELYPDEDLVYTVGTSDYRKDWFFAHVPRKTNSNSHEGTTWQIKFQLDRVDRKSMY 540

Query: 541 MLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL 600
           MLRVAIASATLAELQVR+NDPRSKRPLFTSGLIGRDNSIARHGIHG+YW+YSV +AG HL
Sbjct: 541 MLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGIHGIYWVYSVSVAGCHL 600

Query: 601 VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT 634
           VEG+NTIFLTQPRCTSPFQGIMYDYIRLEGPPT
Sbjct: 601 VEGENTIFLTQPRCTSPFQGIMYDYIRLEGPPT 633

[Close]

BLAST of Moc11g07040 vs. ExPASy TrEMBL
Match: A0A6J1FQM1 (Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111446358 PE=3 SV=1)

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 567/633 (89.57%), Postives = 595/633 (94.00%), Query Frame = 0


Query: 1   MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLV 60
           MSS GVRLQIRD HVVVDNGILQLTLSKPDGI+TGIRYNGVDNLLEVLNPE NRGYWD+V
Sbjct: 1   MSSRGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRGYWDIV 60

Query: 61  WNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSS 120
           WNSPGS+GIFDVIKGSSFRV+VENEE+VELSF RMW+PSLEGK VPLNIDKRFIVLRGSS
Sbjct: 61  WNSPGSQGIFDVIKGSSFRVIVENEEQVELSFTRMWDPSLEGKVVPLNIDKRFIVLRGSS 120

Query: 121 GFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTL 180
           GFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL
Sbjct: 121 GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRLMPLPDDRLSGRCQTL 180

Query: 181 AYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGG 240
            +PEAVLLTNPKNP+ + EVDDKYQYSC+NKDLKVHGWI TNPP GFWQITPSDEFRSGG
Sbjct: 181 GFPEAVLLTNPKNPEHRDEVDDKYQYSCQNKDLKVHGWISTNPPIGFWQITPSDEFRSGG 240

Query: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW 300
           P KQSLTSHVGPTTLAIFLS HYAGQDLVPKFR GEPWKKVFGPVFLY NST  GDDPFW
Sbjct: 241 PHKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRNGEPWKKVFGPVFLYLNSTKAGDDPFW 300

Query: 301 LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGL 360
           LWEDAKIQMM EVQSWPYSFPAS+DFPK+DQRGT+SGRLLVFDRY+S+DYLPA GAFVGL
Sbjct: 301 LWEDAKIQMMAEVQSWPYSFPASDDFPKLDQRGTISGRLLVFDRYMSRDYLPAGGAFVGL 360

Query: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININ 420
           SAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YNLYAWV GFIGDYRCDALINI+
Sbjct: 361 SAPGEVGSWQRECKGYQFWTRADDRGYFIINHVHIGQYNLYAWVPGFIGDYRCDALINIS 420

Query: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGL 480
           QGS IE+GDLVYEPPRDGPTLWEIGIPDRSASEFY PDPNP+HIN LFVNHP+RFRQYGL
Sbjct: 421 QGSSIELGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPLHINKLFVNHPERFRQYGL 480

Query: 481 WDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMY 540
           W+RYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTN N+HQGTTW+I FKLD VD K+ Y
Sbjct: 481 WERYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNDNSHQGTTWKIAFKLDRVDRKNRY 540

Query: 541 MLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL 600
           MLRVAIASATLAELQ+R+NDP SKRPLFTSGLIGRDNSIARHGIHG+YWLYSVGIAG HL
Sbjct: 541 MLRVAIASATLAELQIRVNDPSSKRPLFTSGLIGRDNSIARHGIHGIYWLYSVGIAGLHL 600

Query: 601 VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT 634
           VEGDN IF TQPRCTSPFQGIMYDYIRLE P T
Sbjct: 601 VEGDNAIFFTQPRCTSPFQGIMYDYIRLEAPST 633

[Close]

BLAST of Moc11g07040 vs. ExPASy TrEMBL
Match: A0A6J1J0S6 (Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111480252 PE=3 SV=1)

HSP 1 Score: 1236.5 bits (3198), Expect = 0.0e+00
Identity = 568/633 (89.73%), Postives = 596/633 (94.15%), Query Frame = 0


Query: 1   MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLV 60
           MSS GVRLQIRD HVVVDNGILQLTLSKPDGI+TGI YNGVDNLLEVLNPE NRGYWD+V
Sbjct: 1   MSSRGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIHYNGVDNLLEVLNPESNRGYWDIV 60

Query: 61  WNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSS 120
           WNSPGS+GIFDVIKGSSFRV+VENEE+VELSF RMW+PSLEGK VPLNIDKRFIVLRGSS
Sbjct: 61  WNSPGSQGIFDVIKGSSFRVIVENEEQVELSFTRMWDPSLEGKVVPLNIDKRFIVLRGSS 120

Query: 121 GFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTL 180
           GFYSYAIYEHLKDWPDFD+GETRITFKLRKDKFQYMAVADNRQR MPLPDDRLSGRCQTL
Sbjct: 121 GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRLMPLPDDRLSGRCQTL 180

Query: 181 AYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGG 240
            +PEAVLLTNPKNP+ + EVDDKYQYSCENKDLKVHGWI  NPP GFWQITPSDEFRSGG
Sbjct: 181 GFPEAVLLTNPKNPEHRDEVDDKYQYSCENKDLKVHGWISNNPPIGFWQITPSDEFRSGG 240

Query: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW 300
           P KQSLTSHVGPTTLAIFLS HYAGQDLVPKFR GEPWKKVFGPVFLY NST  GDDPFW
Sbjct: 241 PHKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRNGEPWKKVFGPVFLYLNSTKAGDDPFW 300

Query: 301 LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGL 360
           LWEDAKIQMM EVQSWPYSFPAS++FPK+DQRGT+SGRLLVFDRY+S+DYLPASGAFVGL
Sbjct: 301 LWEDAKIQMMAEVQSWPYSFPASDNFPKLDQRGTISGRLLVFDRYMSRDYLPASGAFVGL 360

Query: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININ 420
           SAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YNLYAWV GFIGDYRCDALINI+
Sbjct: 361 SAPGEVGSWQRECKGYQFWTRADDRGYFIINHVHIGQYNLYAWVPGFIGDYRCDALINIS 420

Query: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGL 480
           QGS IE+G+LVYEPPRDGPTLWEIGIPDRSASEFY PDPNP+HIN LFVNHP+RFRQYGL
Sbjct: 421 QGSSIELGNLVYEPPRDGPTLWEIGIPDRSASEFYIPDPNPMHINKLFVNHPERFRQYGL 480

Query: 481 WDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMY 540
           W+RYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTN+N+HQGTTW+I FKLD VD KS Y
Sbjct: 481 WERYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNNNSHQGTTWKIAFKLDRVDRKSRY 540

Query: 541 MLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL 600
           MLRVAIASATLAELQVR+NDP SKRPLFTSGLIGRDNSIARHGIHG+YWLYSVGIAG HL
Sbjct: 541 MLRVAIASATLAELQVRVNDPSSKRPLFTSGLIGRDNSIARHGIHGIYWLYSVGIAGLHL 600

Query: 601 VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT 634
           VEGDN IF TQPRCTSPFQGIMYDYIRLEGP T
Sbjct: 601 VEGDNAIFFTQPRCTSPFQGIMYDYIRLEGPST 633

[Close]

BLAST of Moc11g07040 vs. TAIR 10
Match: AT1G09910.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 1000.3 bits (2585), Expect = 6.7e-292
Identity = 445/633 (70.30%), Postives = 528/633 (83.41%), Query Frame = 0


Query: 1   MSSTGVRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLV 60
           MSS GV L + DR+VV+DNGILQ+TLSKP GI+TGI YNG+DN+LEV N E NRGYWDL 
Sbjct: 44  MSSHGVHLHVHDRYVVMDNGILQVTLSKPGGIITGIEYNGIDNVLEVRNKETNRGYWDLH 103

Query: 61  WNSPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSS 120
           WN PG KGIFDVI G +FRV+VE EE+VE+SF+R W+PSLEGK++PLNIDKRFI+LRGSS
Sbjct: 104 WNEPGGKGIFDVISGVTFRVIVETEEQVEISFLRTWDPSLEGKYIPLNIDKRFIMLRGSS 163

Query: 121 GFYSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTL 180
           G YSY IYEHLKDWP F+LGETRI FKLRKDKF YMAVAD+R+R MP PDD   GRCQTL
Sbjct: 164 GVYSYGIYEHLKDWPGFELGETRIAFKLRKDKFHYMAVADDRKRIMPFPDDLCKGRCQTL 223

Query: 181 AYPEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGG 240
            Y EA LLT P +P+L+GEVDDKYQYSCENKDL+VHGWI  +PP GFWQITPS+EFRSGG
Sbjct: 224 DYQEASLLTAPCDPRLQGEVDDKYQYSCENKDLRVHGWISFDPPVGFWQITPSNEFRSGG 283

Query: 241 PLKQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFW 300
           PLKQ+LTSHVGPTTLA+F S HYAG+ ++P+F  GEPWKKV+GPVF+Y NST+ GDDP  
Sbjct: 284 PLKQNLTSHVGPTTLAVFHSTHYAGKTMMPRFEHGEPWKKVYGPVFIYLNSTANGDDPLC 343

Query: 301 LWEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGL 360
           LW+DAKI+MM EV+ WPYSF AS+D+PK ++RGT  GRLL+ DR+++ D + A GA+VGL
Sbjct: 344 LWDDAKIKMMAEVERWPYSFVASDDYPKSEERGTARGRLLIRDRFINNDLISARGAYVGL 403

Query: 361 SAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININ 420
           + PG+ GSWQ ECKGYQFW  AD+ GYF+I ++  G+YNLYAWV  FIGDY    ++ + 
Sbjct: 404 APPGDSGSWQIECKGYQFWAIADEAGYFSIGNVRPGEYNLYAWVPSFIGDYHNGTIVRVT 463

Query: 421 QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGL 480
            G  IEMGD+VYEPPRDGPTLWEIGIPDR ASEF+ PDP+P  +N + V+H DRFRQYGL
Sbjct: 464 SGCMIEMGDIVYEPPRDGPTLWEIGIPDRKASEFFIPDPDPTLVNRVLVHHQDRFRQYGL 523

Query: 481 WDRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMY 540
           W +Y ++YP++DLVYTVG SDY +DWFFA VPRK   + H+GTTWQI F L+++D K+ Y
Sbjct: 524 WKKYTDMYPNDDLVYTVGVSDYRRDWFFAHVPRK-KGDVHEGTTWQIIFNLENIDQKANY 583

Query: 541 MLRVAIASATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHL 600
            LRVAIASATLAELQ+RIND  + RPLFT+GLIGRDNSIARHGIHG+Y LY+V I G+ L
Sbjct: 584 KLRVAIASATLAELQIRINDAEAIRPLFTTGLIGRDNSIARHGIHGVYMLYAVNIPGNRL 643

Query: 601 VEGDNTIFLTQPRCTSPFQGIMYDYIRLEGPPT 634
           V+GDNTIFL QPRC  PFQGIMYDYIRLEGPP+
Sbjct: 644 VQGDNTIFLKQPRCNGPFQGIMYDYIRLEGPPS 675

[Close]

BLAST of Moc11g07040 vs. TAIR 10
Match: AT1G09890.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 960.3 bits (2481), Expect = 7.7e-280
Identity = 436/617 (70.66%), Postives = 509/617 (82.50%), Query Frame = 0


Query: 17  VDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIKGS 76
           +DNGI ++TLSKPDGIVTGI YNG+DNLLEVLN E NRGYWDLVW   G+ G FDVIKGS
Sbjct: 1   MDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLVWGGSGTAGGFDVIKGS 60

Query: 77  SFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPD 136
           +F V+V+NEE++ELSF R W+PS EGK VPLNIDKRF++L GSSGFY+YAIYEHLK+WP 
Sbjct: 61  NFEVIVKNEEQIELSFTRKWDPSQEGKAVPLNIDKRFVMLSGSSGFYTYAIYEHLKEWPA 120

Query: 137 FDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNPQL 196
           F L ETRI FKLRK+KF YMAV D+RQRFMPLPDDRL  R Q LAYPEAVLL NP   Q 
Sbjct: 121 FSLAETRIAFKLRKEKFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPLESQF 180

Query: 197 KGEVDDKYQYSCENKDLKVHGWICTNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTL 256
           KGEVDDKYQYSCENKD+ VHGWICT  P+ GFW ITPS E+R+GGP KQ+LTSHVGPT L
Sbjct: 181 KGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTGGPQKQNLTSHVGPTAL 240

Query: 257 AIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGD-DPFWLWEDAKIQMMTEVQ 316
           A+F+SAHY G+DLVPKF  GE WKKVFGPVF+Y NS++  D DP WLW+DAK QM  E +
Sbjct: 241 AVFISAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDPLWLWQDAKSQMNVEAE 300

Query: 317 SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECK 376
           SWPYSFPAS+D+ K +QRG V GRLLV DRYV +D++ A+  +VGL+ PG  GSWQRECK
Sbjct: 301 SWPYSFPASDDYVKTEQRGNVVGRLLVQDRYVDKDFIAANRGYVGLAVPGAAGSWQRECK 360

Query: 377 GYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININQGSCIEMGDLVYEP 436
            YQFWTR D+ G+F I+ I  G YNLYAW+ GFIGDY+ D +I I  G  I + DLVY+P
Sbjct: 361 EYQFWTRTDEEGFFYISGIRPGQYNLYAWIPGFIGDYKYDDVITITSGCYIYVEDLVYQP 420

Query: 437 PRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPDEDLV 496
           PR+G TLWEIG PDRSA+EFY PDPNP +INNL+ NHPDRFRQYGLW+RYAELYPD+DLV
Sbjct: 421 PRNGATLWEIGFPDRSAAEFYVPDPNPKYINNLYQNHPDRFRQYGLWERYAELYPDKDLV 480

Query: 497 YTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAEL 556
           Y VG+SDY KDWF+AQV RK ++  +QGTTWQIKF+L ++D    Y LRVAIASAT +EL
Sbjct: 481 YVVGSSDYRKDWFYAQVTRKKDNKTYQGTTWQIKFELKNIDKNHSYTLRVAIASATFSEL 540

Query: 557 QVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPRC 616
           Q+R+N+  +  P+FTSGLIGRDNSIARHGIHGLYWL++V +AGS L+EG+NT+FLTQPR 
Sbjct: 541 QIRVNNANAS-PMFTSGLIGRDNSIARHGIHGLYWLFNVEVAGSKLLEGENTLFLTQPRS 600

Query: 617 TSPFQGIMYDYIRLEGP 632
           TSPFQGIMYDYIR E P
Sbjct: 601 TSPFQGIMYDYIRFEAP 616

[Close]

BLAST of Moc11g07040 vs. TAIR 10
Match: AT4G24430.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 881.3 bits (2276), Expect = 4.6e-256
Identity = 406/634 (64.04%), Postives = 500/634 (78.86%), Query Frame = 0


Query: 6   VRLQIRDRHVVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWN--- 65
           V+L +++ HVV+ NG +++T+SKPDG VTGI Y GVDNLLE  N + NRGYWDLVW+   
Sbjct: 7   VQLDVQESHVVMGNGKVKVTISKPDGFVTGISYQGVDNLLETHNEDFNRGYWDLVWSDEG 66

Query: 66  SPGSKGIFDVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSSGF 125
           +PG+ G  + IKG+SF VVVENEE VE+SF R W+ SL+    P+N+DKRFI+ +  +GF
Sbjct: 67  TPGTTGKSERIKGTSFEVVVENEELVEISFSRKWDSSLQDSIAPINVDKRFIMRKDVTGF 126

Query: 126 YSYAIYEHLKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAY 185
           YSYAI+EHL +WP F+L +TRI +KLRKDKF+YMA+ADNRQR MPLP+DRL  R + LAY
Sbjct: 127 YSYAIFEHLAEWPAFNLPQTRIVYKLRKDKFKYMAIADNRQRKMPLPEDRLGKRGRPLAY 186

Query: 186 PEAVLLTNPKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPL 245
           PEAVLL +P   + KGEVDDKY+YS ENKDLKVHGWI  N   G WQI PS+EFRSGG  
Sbjct: 187 PEAVLLVHPVEDEFKGEVDDKYEYSSENKDLKVHGWISHNLDLGCWQIIPSNEFRSGGLS 246

Query: 246 KQSLTSHVGPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNS-TSVGDDPFWL 305
           KQ+LTSHVGP +LA+FLSAHYAG+D+V K +AG+ WKKVFGPVF Y N       DP  L
Sbjct: 247 KQNLTSHVGPISLAMFLSAHYAGEDMVMKVKAGDSWKKVFGPVFTYLNCLPDKTSDPLSL 306

Query: 306 WEDAKIQMMTEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLS 365
           W+DAK QM+TEVQSWPY FPASEDFP  D+RG +SGRLLV D+++S D+LPA+GAFVGL+
Sbjct: 307 WQDAKNQMLTEVQSWPYDFPASEDFPVSDKRGCISGRLLVCDKFLSDDFLPANGAFVGLA 366

Query: 366 APGEVGSWQRECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININQ 425
            PGEVGSWQ E KGYQFWT AD  GYF IN I  G+YNL  +V G+IGDY+ + LINI  
Sbjct: 367 PPGEVGSWQLESKGYQFWTEADSDGYFAINDIREGEYNLNGYVTGWIGDYQYEQLINITA 426

Query: 426 GSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLW 485
           G  I++G++VYEPPRDGPT+WEIGIPDRSA+EF+ PDPNP +IN L++ HPDRFRQYGLW
Sbjct: 427 GCDIDVGNIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFRQYGLW 486

Query: 486 DRYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYM 545
           +RY ELYP EDLV+T+G SDY KDWFFA V RK   + +Q TTWQIKFKL++V     Y 
Sbjct: 487 ERYTELYPKEDLVFTIGVSDYKKDWFFAHVTRKMGDDTYQKTTWQIKFKLENVQKSCTYK 546

Query: 546 LRVAIASATLAELQVRINDPRSKR--PLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSH 605
           +R+A+A+A +AELQVR+ND  +++  P+FT+G+IG DN+IARHGIHG+Y LY+V +    
Sbjct: 547 IRIALATANVAELQVRMNDDDTEKTTPIFTTGVIGHDNAIARHGIHGIYRLYNVDVPSEK 606

Query: 606 LVEGDNTIFLTQPRCTS-PFQGIMYDYIRLEGPP 633
           LVEGDNT+FLTQ   T+  F G+MYDYIRLEGPP
Sbjct: 607 LVEGDNTLFLTQTMTTTGAFNGLMYDYIRLEGPP 640

[Close]

BLAST of Moc11g07040 vs. TAIR 10
Match: AT1G09880.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 830.5 bits (2144), Expect = 9.2e-241
Identity = 377/626 (60.22%), Postives = 478/626 (76.36%), Query Frame = 0


Query: 17  VDNGILQLTLSKPDGIVTGIRYNGVDNLLE-VLNPEHNRGYWDLVWNSPG-----SKGIF 76
           ++N  LQLTLS P+G VTGI+YNG+DN+L    N E++RGYWD+VWN PG     +KG  
Sbjct: 1   MENRFLQLTLSNPEGFVTGIQYNGIDNVLAYYTNKEYDRGYWDVVWNFPGKKAKKTKGTL 60

Query: 77  DVIKGSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSSGFYSYAIYEH 136
           D I+ +   V+ +N+E++ELSF R W  S     VP+NIDKRF++L+ SSGFYSYAI+E 
Sbjct: 61  DRIEATKMEVITQNDEKIELSFTRTWNTS-STTAVPVNIDKRFVMLQNSSGFYSYAIFER 120

Query: 137 LKDWPDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTN 196
           L+ WP  +L   R+ FKL K KF YMA++D+RQR+MP+PDDR+  R Q LAYPEAV L +
Sbjct: 121 LQGWPAVELDNMRLVFKLNKKKFHYMAISDDRQRYMPVPDDRVPPRGQPLAYPEAVQLLD 180

Query: 197 PKNPQLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHV 256
           P  P+ KGEVDDKY+YS E+KD+KVHGWI TN   GFWQITPS+EFRS GPLKQ L SHV
Sbjct: 181 PIEPEFKGEVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSAGPLKQFLGSHV 240

Query: 257 GPTTLAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMM 316
           GPT LA+F S HY G DL+  F+ GE WKKVFGPVF+Y NS   G DP  LW +AK Q  
Sbjct: 241 GPTNLAVFHSTHYVGADLIMSFKNGEAWKKVFGPVFIYLNSFPKGVDPLLLWHEAKNQTK 300

Query: 317 TEVQSWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQ 376
            E + WPY+F AS+DFP  DQRG+VSGRLLV DR++S + +PA+G++VGL+APG+VGSWQ
Sbjct: 301 IEEEKWPYNFTASDDFPASDQRGSVSGRLLVRDRFISSEDIPANGSYVGLAAPGDVGSWQ 360

Query: 377 RECKGYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININQGSCIEMGDL 436
           RECKGYQFW++AD+ G F+IN++ +G YNLYA+  GFIGDY  D + +I+ GS I +GDL
Sbjct: 361 RECKGYQFWSKADENGSFSINNVRSGRYNLYAFAPGFIGDYHNDTVFDISPGSKISLGDL 420

Query: 437 VYEPPRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNHPDRFRQYGLWDRYAELYPD 496
           VYEPPRDG TLWEIG+PDRSA+EFY PDPNP  +N L++NH D++RQYGLW+RY+ELYPD
Sbjct: 421 VYEPPRDGSTLWEIGVPDRSAAEFYIPDPNPSFVNKLYLNHSDKYRQYGLWERYSELYPD 480

Query: 497 EDLVYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDS--VDHKSMYMLRVAIAS 556
           ED+VY V   DYSK+WFF QV RK  +  ++GTTWQI+F+ D    +    + LR+A+A+
Sbjct: 481 EDMVYNVDIDDYSKNWFFMQVTRKQANGGYKGTTWQIRFQFDDKMKNVTGNFKLRIALAT 540

Query: 557 ATLAELQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIF 616
           + +AELQVR+ND  +  PLF +  IGRDN+IARHGIHGLYWLYSV +  + L  G+NTI+
Sbjct: 541 SNVAELQVRVNDLSADPPLFRTEQIGRDNTIARHGIHGLYWLYSVNVPAASLHVGNNTIY 600

Query: 617 LTQPRCTSPFQGIMYDYIRLEGPPTM 635
           LTQ   TSPFQG+MYDYIRLE P ++
Sbjct: 601 LTQALATSPFQGLMYDYIRLEYPDSI 625

[Close]

BLAST of Moc11g07040 vs. TAIR 10
Match: AT2G22620.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 781.6 bits (2017), Expect = 4.9e-226
Identity = 363/618 (58.74%), Postives = 450/618 (72.82%), Query Frame = 0


Query: 15  VVVDNGILQLTLSKPDGIVTGIRYNGVDNLLEVLNPEHNRGYWDLVWNSPGSKGIFDVIK 74
           VVVDNGI+Q+T S P+G++TGI+Y+G+DN+L+  +   +RGYWD+VW  P  K   D ++
Sbjct: 62  VVVDNGIVQVTFSNPEGLITGIKYHGIDNVLD--DKIDDRGYWDVVWYEPEKKQKTDKLE 121

Query: 75  GSSFRVVVENEERVELSFMRMWEPSLEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDW 134
           G+ F ++ +NEE++E+SF R W  S  G  VPLN+DKR+I+  G SG Y Y I E L+ W
Sbjct: 122 GTKFEIITQNEEQIEISFTRTWTISRRGSLVPLNVDKRYIIRSGVSGLYMYGILERLEGW 181

Query: 135 PDFDLGETRITFKLRKDKFQYMAVADNRQRFMPLPDDRLSGRCQTLAYPEAVLLTNPKNP 194
           PD D+ + RI FKL   KF +MA++D+RQR MP   DR + +  +LAY EAVLLTNP NP
Sbjct: 182 PDVDMDQIRIVFKLNPKKFDFMAISDDRQRSMPSMADRENSK--SLAYKEAVLLTNPSNP 241

Query: 195 QLKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTT 254
             KGEVDDKY YS E+KD  VHGWI ++PP GFW ITPSDEFR GGP+KQ LTSH GP T
Sbjct: 242 MFKGEVDDKYMYSMEDKDNNVHGWISSDPPVGFWMITPSDEFRLGGPIKQDLTSHAGPIT 301

Query: 255 LAIFLSAHYAGQDLVPKFRAGEPWKKVFGPVFLYFNSTSVGDDPFWLWEDAKIQMMTEVQ 314
           L++F S HYAG+++   +R GEPWKKVFGPV  Y NS S  D    LW DAK QM  EV+
Sbjct: 302 LSMFTSTHYAGKEMRMDYRNGEPWKKVFGPVLAYLNSVSPKDSTLRLWRDAKRQMAAEVK 361

Query: 315 SWPYSFPASEDFPKVDQRGTVSGRLLVFDRYVSQDYLPASGAFVGLSAPGEVGSWQRECK 374
           SWPY F  SED+P   QRGT+ G+ L+ D YVS+  +    AFVGL+  GE GSWQ E K
Sbjct: 362 SWPYDFITSEDYPLRHQRGTLEGQFLIKDSYVSRLKIYGKFAFVGLAPIGEAGSWQTESK 421

Query: 375 GYQFWTRADDGGYFTINHIHAGDYNLYAWVHGFIGDYRCDALININQGSCIEMGDLVYEP 434
           GYQFWT+AD  G F I ++ AG+Y+LYAW  GFIGDY+ +  I I  GS + +G LVYEP
Sbjct: 422 GYQFWTKADRRGRFIIENVRAGNYSLYAWGSGFIGDYKYEQNITITPGSEMNVGPLVYEP 481

Query: 435 PRDGPTLWEIGIPDRSASEFYAPDPNPIHINNLFVNH-PDRFRQYGLWDRYAELYPDEDL 494
           PR+GPTLWEIG+PDR+A EFY PDP P  +N L+VN   DRFRQYGLWDRYA+LYP  DL
Sbjct: 482 PRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYVNPLQDRFRQYGLWDRYADLYPQNDL 541

Query: 495 VYTVGTSDYSKDWFFAQVPRKTNSNAHQGTTWQIKFKLDSVDHKSMYMLRVAIASATLAE 554
           VYT+G SDY  DWFFA V R   ++ +Q TTWQI F L +V+    Y LR+A+ASA  +E
Sbjct: 542 VYTIGVSDYRSDWFFAHVARNVGNDTYQPTTWQIIFNLKNVNRIGRYTLRIALASAADSE 601

Query: 555 LQVRINDPRSKRPLFTSGLIGRDNSIARHGIHGLYWLYSVGIAGSHLVEGDNTIFLTQPR 614
           LQ+RINDP+S   +FT+G IG+DN+IARHGIHGLY LYS+ +AG+ L  GDNTIFLTQ R
Sbjct: 602 LQIRINDPKSD-AIFTTGFIGKDNAIARHGIHGLYRLYSIDVAGNLLSVGDNTIFLTQTR 661

Query: 615 CTSPFQGIMYDYIRLEGP 632
             +PFQGIMYDYIRLE P
Sbjct: 662 SRTPFQGIMYDYIRLESP 674

The following BLAST results are available for this feature:

BLAST of Moc11g07040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897922.1	0.0e+00	92.73	probable rhamnogalacturonate lyase B [Benincasa hispida]	[more]
XP_004136250.1	0.0e+00	91.79	probable rhamnogalacturonate lyase B isoform X1 [Cucumis sativus] >KGN60276.1 hy...	[more]
XP_008466137.1	0.0e+00	91.94	PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo] >KAA00...	[more]
XP_022940913.1	0.0e+00	89.57	probable rhamnogalacturonate lyase B isoform X1 [Cucurbita moschata]	[more]
XP_022980958.1	0.0e+00	89.73	probable rhamnogalacturonate lyase B [Cucurbita maxima]	[more]

BLAST of Moc11g07040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5AZ85	1.4e-20	22.32	Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 ...	[more]
A5ABH4	3.5e-19	26.33	Probable rhamnogalacturonate lyase B OS=Aspergillus niger (strain CBS 513.88 / F...	[more]

BLAST of Moc11g07040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJQ9	0.0e+00	91.79	Rhamnogalacturonan endolyase OS=Cucumis sativus OX=3659 GN=Csa_3G892770 PE=3 SV=...	[more]
A0A5D3E6J1	0.0e+00	91.94	Rhamnogalacturonan endolyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CQJ4	0.0e+00	91.94	Rhamnogalacturonan endolyase OS=Cucumis melo OX=3656 GN=LOC103503644 PE=3 SV=1	[more]
A0A6J1FQM1	0.0e+00	89.57	Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111446358 PE=3 ...	[more]
A0A6J1J0S6	0.0e+00	89.73	Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111480252 PE=3 SV...	[more]

BLAST of Moc11g07040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09910.1	6.7e-292	70.30	Rhamnogalacturonate lyase family protein	[more]
AT1G09890.1	7.7e-280	70.66	Rhamnogalacturonate lyase family protein	[more]
AT4G24430.1	4.6e-256	64.04	Rhamnogalacturonate lyase family protein	[more]
AT1G09880.1	9.2e-241	60.22	Rhamnogalacturonate lyase family protein	[more]
AT2G22620.1	4.9e-226	58.74	Rhamnogalacturonate lyase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.260		coord: 438..629 e-value: 3.6E-22 score: 80.7
None	No IPR available	GENE3D	2.60.40.1120		coord: 329..413 e-value: 7.2E-6 score: 28.1
None	No IPR available	PANTHER	PTHR32018	RHAMNOGALACTURONATE LYASE FAMILY PROTEIN	coord: 1..633
None	No IPR available	PANTHER	PTHR32018:SF8	RHAMNOGALACTURONATE LYASE FAMILY PROTEIN	coord: 1..633
None	No IPR available	CDD	cd10320	RGL4_N	coord: 6..293 e-value: 9.96131E-76 score: 241.139
None	No IPR available	CDD	cd10317	RGL4_C	coord: 442..629 e-value: 6.81458E-55 score: 182.09
IPR029413	Rhamnogalacturonan lyase, domain II	PFAM	PF14686	fn3_3	coord: 354..425 e-value: 3.3E-23 score: 81.3
IPR029413	Rhamnogalacturonan lyase, domain II	CDD	cd10316	RGL4_M	coord: 331..430 e-value: 1.00761E-31 score: 116.194
IPR029411	Rhamnogalacturonan lyase, domain III	PFAM	PF14683	CBM-like	coord: 440..628 e-value: 1.9E-56 score: 190.6
IPR010325	Rhamnogalacturonate lyase	PFAM	PF06045	Rhamnogal_lyase	coord: 9..200 e-value: 5.6E-92 score: 307.0
IPR014718	Glycoside hydrolase-type carbohydrate-binding	GENE3D	2.70.98.10		coord: 7..305 e-value: 1.1E-11 score: 46.6
IPR011013	Galactose mutarotase-like domain superfamily	SUPERFAMILY	74650	Galactose mutarotase-like	coord: 12..296
IPR013784	Carbohydrate-binding-like fold	SUPERFAMILY	49452	Starch-binding domain-like	coord: 329..420
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 437..629

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g07040.1	Moc11g07040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0102210	rhamnogalacturonan endolyase activity
molecular_function	GO:0003824	catalytic activity