Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTACAAATCCAAACTATACTAGCATACATCGTCACCCTAATCGAATCAGTATATACTTCATCAAAAAATTCAGGAAAGCTGAAACAGATGAAGGTCAAGACGGAGAAAAACTCGGCCAAGGAAGAGCAACCTGATTGGAATCCAGATAATAAGGCAGGTGCAGTTGATCAAATCAAGAAGAAGTACGGGTTTTCATCAGCTGGGGTAAGTACACATCTGCTACCAATCTTCTAGCTACGCATACATATGGCTAAGTTGAACTCTTACAAATGATGCCTTTCGAAAAAGATGATGAGAGGAGTAGGTCAATGGATCTTATAAATCTTGTCGGGTTCTTTGATATTATTCATCTGGGATCCTTAACAATCTTAAATAAGGAGAAAGATGTAAGCAATGTATGTATAAATGATCTAGATAACTCTAGCAGTTTATACGAATTCTAACTAATGATTCCTTCTTAAGATTGAGCCGACACTGCACAATTAGATATTGGTGATCCTTGGACGAATACAAAAGTAGATAGACGAATGCAAGCTGTATGGCCTCTTGGAACGTAGCTGTTAGAGTCACATTTCGGGGCTAATATTCCACTTAATCAGAAATAGATTGAGCTATTGATGTAGAAAATAGTGAACTAATTTAGAGTGTTGGTGTAAGATTTGATGAAGTTGCATCACCACTGATCACCATCCGTTTTCTTTGCTTGCAGGAAACAAGTGTTGCAAAGATGACAGAAAGCAAGCTGCAAGAGAATGTGAAGAAATTACAGGTACAATCCCCAACTTTCAACTTCAAGAAAAGTATGCAAAGGGGTTTTATATTAATTGAATTTGAGCAAAAGAGGGAAGGGGAATGATATATAATTACATTGTGCAGGGAATCAACCAAAGAGCTACAGATATGCAAGACACAGGCAAAGTCATTTTCATCAATGGCAAATCAATTACTGCGAACTGCTGA
mRNA sequence
ATGGCTTTACAAATCCAAACTATACTAGCATACATCGTCACCCTAATCGAATCAGTATATACTTCATCAAAAAATTCAGGAAAGCTGAAACAGATGAAGGTCAAGACGGAGAAAAACTCGGCCAAGGAAGAGCAACCTGATTGGAATCCAGATAATAAGGCAGGTGCAGTTGATCAAATCAAGAAGAAGTACGGGTTTTCATCAGCTGGGGAAACAAGTGTTGCAAAGATGACAGAAAGCAAGCTGCAAGAGAATGTGAAGAAATTACAGGGAATCAACCAAAGAGCTACAGATATGCAAGACACAGGCAAAGTCATTTTCATCAATGGCAAATCAATTACTGCGAACTGCTGA
Coding sequence (CDS)
ATGGCTTTACAAATCCAAACTATACTAGCATACATCGTCACCCTAATCGAATCAGTATATACTTCATCAAAAAATTCAGGAAAGCTGAAACAGATGAAGGTCAAGACGGAGAAAAACTCGGCCAAGGAAGAGCAACCTGATTGGAATCCAGATAATAAGGCAGGTGCAGTTGATCAAATCAAGAAGAAGTACGGGTTTTCATCAGCTGGGGAAACAAGTGTTGCAAAGATGACAGAAAGCAAGCTGCAAGAGAATGTGAAGAAATTACAGGGAATCAACCAAAGAGCTACAGATATGCAAGACACAGGCAAAGTCATTTTCATCAATGGCAAATCAATTACTGCGAACTGCTGA
Protein sequence
MALQIQTILAYIVTLIESVYTSSKNSGKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVAKMTESKLQENVKKLQGINQRATDMQDTGKVIFINGKSITANC
Homology
BLAST of Moc10g30200 vs. NCBI nr
Match:
XP_022145407.1 (uncharacterized protein LOC111014861 isoform X1 [Momordica charantia])
HSP 1 Score: 149.1 bits (375), Expect = 2.4e-32
Identity = 80/89 (89.89%), Postives = 82/89 (92.13%), Query Frame = 0
Query: 16 IESVYTSSKNSGKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVA 75
+ S + S K GKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVA
Sbjct: 943 LASTFNSFK--GKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVA 1002
Query: 76 KMTESKLQENVKKLQGINQRATDMQDTGK 105
KMTESKLQENVKKLQGINQRATDMQDT K
Sbjct: 1003 KMTESKLQENVKKLQGINQRATDMQDTAK 1029
BLAST of Moc10g30200 vs. NCBI nr
Match:
XP_022145409.1 (uncharacterized protein LOC111014861 isoform X2 [Momordica charantia])
HSP 1 Score: 149.1 bits (375), Expect = 2.4e-32
Identity = 80/89 (89.89%), Postives = 82/89 (92.13%), Query Frame = 0
Query: 16 IESVYTSSKNSGKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVA 75
+ S + S K GKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVA
Sbjct: 857 LASTFNSFK--GKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVA 916
Query: 76 KMTESKLQENVKKLQGINQRATDMQDTGK 105
KMTESKLQENVKKLQGINQRATDMQDT K
Sbjct: 917 KMTESKLQENVKKLQGINQRATDMQDTAK 943
BLAST of Moc10g30200 vs. NCBI nr
Match:
XP_023552249.1 (uncharacterized protein LOC111809973 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 132.5 bits (332), Expect = 2.4e-27
Identity = 74/91 (81.32%), Postives = 78/91 (85.71%), Query Frame = 0
Query: 16 IESVYTSSKNSGKLKQMKVKTEKNSAKEEQPDWN--PDNKAGAVDQIKKKYGFSSAGETS 75
+ S + S K GKLKQMKVKTEKNSAKEEQPDWN DNKAGAVDQIKKKYGFSSAG+TS
Sbjct: 852 LASTFNSLK--GKLKQMKVKTEKNSAKEEQPDWNNAADNKAGAVDQIKKKYGFSSAGDTS 911
Query: 76 VAKMTESKLQENVKKLQGINQRATDMQDTGK 105
VAKM ESKLQEN+ KLQGIN RATDMQDT K
Sbjct: 912 VAKMAESKLQENITKLQGINLRATDMQDTAK 940
BLAST of Moc10g30200 vs. NCBI nr
Match:
KAG7015851.1 (Syntaxin-binding protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 132.5 bits (332), Expect = 2.4e-27
Identity = 74/91 (81.32%), Postives = 78/91 (85.71%), Query Frame = 0
Query: 16 IESVYTSSKNSGKLKQMKVKTEKNSAKEEQPDWN--PDNKAGAVDQIKKKYGFSSAGETS 75
+ S + S K GKLKQMKVKTEKNSAKEEQPDWN DNKAGAVDQIKKKYGFSSAG+TS
Sbjct: 891 LASTFNSLK--GKLKQMKVKTEKNSAKEEQPDWNNAADNKAGAVDQIKKKYGFSSAGDTS 950
Query: 76 VAKMTESKLQENVKKLQGINQRATDMQDTGK 105
VAKM ESKLQEN+ KLQGIN RATDMQDT K
Sbjct: 951 VAKMAESKLQENITKLQGINLRATDMQDTAK 979
BLAST of Moc10g30200 vs. NCBI nr
Match:
XP_023552248.1 (uncharacterized protein LOC111809973 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 132.5 bits (332), Expect = 2.4e-27
Identity = 74/91 (81.32%), Postives = 78/91 (85.71%), Query Frame = 0
Query: 16 IESVYTSSKNSGKLKQMKVKTEKNSAKEEQPDWN--PDNKAGAVDQIKKKYGFSSAGETS 75
+ S + S K GKLKQMKVKTEKNSAKEEQPDWN DNKAGAVDQIKKKYGFSSAG+TS
Sbjct: 938 LASTFNSLK--GKLKQMKVKTEKNSAKEEQPDWNNAADNKAGAVDQIKKKYGFSSAGDTS 997
Query: 76 VAKMTESKLQENVKKLQGINQRATDMQDTGK 105
VAKM ESKLQEN+ KLQGIN RATDMQDT K
Sbjct: 998 VAKMAESKLQENITKLQGINLRATDMQDTAK 1026
BLAST of Moc10g30200 vs. ExPASy TrEMBL
Match:
A0A6J1CV57 (uncharacterized protein LOC111014861 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014861 PE=4 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 1.2e-32
Identity = 80/89 (89.89%), Postives = 82/89 (92.13%), Query Frame = 0
Query: 16 IESVYTSSKNSGKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVA 75
+ S + S K GKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVA
Sbjct: 857 LASTFNSFK--GKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVA 916
Query: 76 KMTESKLQENVKKLQGINQRATDMQDTGK 105
KMTESKLQENVKKLQGINQRATDMQDT K
Sbjct: 917 KMTESKLQENVKKLQGINQRATDMQDTAK 943
BLAST of Moc10g30200 vs. ExPASy TrEMBL
Match:
A0A6J1CWH3 (uncharacterized protein LOC111014861 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014861 PE=4 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 1.2e-32
Identity = 80/89 (89.89%), Postives = 82/89 (92.13%), Query Frame = 0
Query: 16 IESVYTSSKNSGKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVA 75
+ S + S K GKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVA
Sbjct: 943 LASTFNSFK--GKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVA 1002
Query: 76 KMTESKLQENVKKLQGINQRATDMQDTGK 105
KMTESKLQENVKKLQGINQRATDMQDT K
Sbjct: 1003 KMTESKLQENVKKLQGINQRATDMQDTAK 1029
BLAST of Moc10g30200 vs. ExPASy TrEMBL
Match:
A0A6J1L5G9 (uncharacterized protein LOC111500196 OS=Cucurbita maxima OX=3661 GN=LOC111500196 PE=4 SV=1)
HSP 1 Score: 132.5 bits (332), Expect = 1.1e-27
Identity = 74/91 (81.32%), Postives = 78/91 (85.71%), Query Frame = 0
Query: 16 IESVYTSSKNSGKLKQMKVKTEKNSAKEEQPDWN--PDNKAGAVDQIKKKYGFSSAGETS 75
+ S + S K GKLKQMKVKTEKNSAKEEQPDWN DNKAGAVDQIKKKYGFSSAG+TS
Sbjct: 940 LASTFNSLK--GKLKQMKVKTEKNSAKEEQPDWNNAADNKAGAVDQIKKKYGFSSAGDTS 999
Query: 76 VAKMTESKLQENVKKLQGINQRATDMQDTGK 105
VAKM ESKLQEN+ KLQGIN RATDMQDT K
Sbjct: 1000 VAKMAESKLQENITKLQGINLRATDMQDTAK 1028
BLAST of Moc10g30200 vs. ExPASy TrEMBL
Match:
A0A6J1E6S7 (uncharacterized protein LOC111431125 OS=Cucurbita moschata OX=3662 GN=LOC111431125 PE=4 SV=1)
HSP 1 Score: 132.5 bits (332), Expect = 1.1e-27
Identity = 74/91 (81.32%), Postives = 78/91 (85.71%), Query Frame = 0
Query: 16 IESVYTSSKNSGKLKQMKVKTEKNSAKEEQPDWN--PDNKAGAVDQIKKKYGFSSAGETS 75
+ S + S K GKLKQMKVKTEKNSAKEEQPDWN DNKAGAVDQIKKKYGFSSAG+TS
Sbjct: 939 LASTFNSLK--GKLKQMKVKTEKNSAKEEQPDWNNAADNKAGAVDQIKKKYGFSSAGDTS 998
Query: 76 VAKMTESKLQENVKKLQGINQRATDMQDTGK 105
VAKM ESKLQEN+ KLQGIN RATDMQDT K
Sbjct: 999 VAKMAESKLQENITKLQGINLRATDMQDTAK 1027
BLAST of Moc10g30200 vs. ExPASy TrEMBL
Match:
A0A6J1FNW7 (uncharacterized protein LOC111446607 OS=Cucurbita moschata OX=3662 GN=LOC111446607 PE=4 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 7.0e-25
Identity = 70/91 (76.92%), Postives = 76/91 (83.52%), Query Frame = 0
Query: 16 IESVYTSSKNSGKLKQMKVKTEKNSAKEEQPDWN--PDNKAGAVDQIKKKYGFSSAGETS 75
+ S + S K GKLKQMK KTEKNS+KEEQ DWN D+KAGAVDQIKKKYGFSSAGETS
Sbjct: 955 LASTFNSFK--GKLKQMKAKTEKNSSKEEQVDWNAAADSKAGAVDQIKKKYGFSSAGETS 1014
Query: 76 VAKMTESKLQENVKKLQGINQRATDMQDTGK 105
AKM ESKLQEN KKLQGI+QRAT+MQDT K
Sbjct: 1015 DAKMAESKLQENAKKLQGISQRATEMQDTAK 1043
BLAST of Moc10g30200 vs. TAIR 10
Match:
AT4G35560.1 (Transducin/WD40 repeat-like superfamily protein )
HSP 1 Score: 76.3 bits (186), Expect = 1.9e-14
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 0
Query: 23 SKNSGKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVAKMTESKL 82
S GKLKQM K EK+ ++ + + VDQIKKKYGF+S+ E AKM +SKL
Sbjct: 948 SNFKGKLKQMAAKNEKSVVTNDEK--HEEKNGATVDQIKKKYGFTSSDEMGAAKMAQSKL 1007
Query: 83 QENVKKLQGINQRATDMQDTGKVIFINGKSI 114
Q+N+KKLQGI+ R T+M+DT K K +
Sbjct: 1008 QDNLKKLQGISLRTTEMEDTAKSFSSTAKEL 1036
BLAST of Moc10g30200 vs. TAIR 10
Match:
AT4G35560.2 (Transducin/WD40 repeat-like superfamily protein )
HSP 1 Score: 76.3 bits (186), Expect = 1.9e-14
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 0
Query: 23 SKNSGKLKQMKVKTEKNSAKEEQPDWNPDNKAGAVDQIKKKYGFSSAGETSVAKMTESKL 82
S GKLKQM K EK+ ++ + + VDQIKKKYGF+S+ E AKM +SKL
Sbjct: 949 SNFKGKLKQMAAKNEKSVVTNDEK--HEEKNGATVDQIKKKYGFTSSDEMGAAKMAQSKL 1008
Query: 83 QENVKKLQGINQRATDMQDTGKVIFINGKSI 114
Q+N+KKLQGI+ R T+M+DT K K +
Sbjct: 1009 QDNLKKLQGISLRTTEMEDTAKSFSSTAKEL 1037
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022145407.1 | 2.4e-32 | 89.89 | uncharacterized protein LOC111014861 isoform X1 [Momordica charantia] | [more] |
XP_022145409.1 | 2.4e-32 | 89.89 | uncharacterized protein LOC111014861 isoform X2 [Momordica charantia] | [more] |
XP_023552249.1 | 2.4e-27 | 81.32 | uncharacterized protein LOC111809973 isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
KAG7015851.1 | 2.4e-27 | 81.32 | Syntaxin-binding protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_023552248.1 | 2.4e-27 | 81.32 | uncharacterized protein LOC111809973 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CV57 | 1.2e-32 | 89.89 | uncharacterized protein LOC111014861 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1CWH3 | 1.2e-32 | 89.89 | uncharacterized protein LOC111014861 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1L5G9 | 1.1e-27 | 81.32 | uncharacterized protein LOC111500196 OS=Cucurbita maxima OX=3661 GN=LOC111500196... | [more] |
A0A6J1E6S7 | 1.1e-27 | 81.32 | uncharacterized protein LOC111431125 OS=Cucurbita moschata OX=3662 GN=LOC1114311... | [more] |
A0A6J1FNW7 | 7.0e-25 | 76.92 | uncharacterized protein LOC111446607 OS=Cucurbita moschata OX=3662 GN=LOC1114466... | [more] |
Match Name | E-value | Identity | Description | |
AT4G35560.1 | 1.9e-14 | 47.25 | Transducin/WD40 repeat-like superfamily protein | [more] |
AT4G35560.2 | 1.9e-14 | 47.25 | Transducin/WD40 repeat-like superfamily protein | [more] |