Moc10g26770 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc10g26770
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	RNase H domain-containing protein
Location	chr10: 19691900 .. 19694339 (-)
RNA-Seq Expression	Moc10g26770
Synteny	Moc10g26770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCCAAAGTTGGTGGGTTTTGAGCCCGAACCAATGACCCATCATATTGGTTGTGTATCGAGGCTTGTGGTACTGTCTGGTTAGCGATAAACAGCCAGAAACCTCCAATCACTGCTGCTGGTCGAAAGATGTGGGTATTGGGAGTATAAACATTCAAATTTGGAAGCTTAAGGGATGAGAACTTATGGGTATTATGGTAGATGAAGAGGGTAACGTAGTGCTTTGAGAAGAAGAAGTTATTATATGATTTCTAGTATAATCGAAAAACATTAAGCACAAGTAAATAAAAGGTAGAAAAACTCTTGTAAGTATCAAAAGGGTCTTAGTAACATGGAATAATAAGACCTAGTCTTTCTTTTGTTGTCATGCATTTCATTACATTAAGTAAAAAGTATAAATATAAAAATAGAGAATCAAGATAGATCACTATCTATCACATACCCCTATATTCCTTTCTCATTTTATCTAATCTTTACTATCTCCCGATTATGAAACAATCGGGAGATGACATGGCCTATTACATGCGTAACTAGAGCTTATCGAAAAAAAATTATTTATTTTTTTACTTAAAATCACTTTTTTTAAGATTAAAAAAAAGCCAATTATCCATTCAATATGATATTGATTAAATGCTCTAGCACTCAGATACTAGAAGCCATGGATGATGAAGAAAACTCAAATGAAAAAGATGGAGAATTTTTTCCTTCTATTACCGTTGTAAAACGCAAAGAGGGAGGGAAATTGGGGCTAATTTTTTTCGTGAAGAAGGGGAAGAAAGAGATGAAGTGTCCTTTGCTCTCTTTTTTTTTAAATAGGGTTTAATGTTAATTAAATAAAAAACCCAATTGGAAAAGGAAACCCACAAAGATTCAAAAACTCAAAAGCCCACTTTTTTATCTTAAAGCCTTCTAAATGAAAAACATGTGTGTTTATTAATTTTTTTATTTTTTTAAAACTCCCAATTCGTCTTTGTAACTGGTCTGCGGCTTCTTTATCTTTAGCAGGGCACTCGACATTAGTTAAATCGGTCCTTCAGGCTTTGCCAACACATGCTATGCATATTTTTAAGTTTCCAGTAGCAGTTTGTAACAAACTTGACCAGATTTGTAGGAACTTCTTATGGGGGCATACCGCTTAAAAATCTAGAATACACCTTCTTAATTGAAATTTGGTCACAAAGCCAAAGTTTGAGGGGGGACTTGGGTTACACCGATTTAAAGAATTTAACATAGCTCTGATTGGCAAAATTGGCTGGGGGTTAATCAGCCGACCGAACGATCTTTGGGCTCAACTGCTCATAAATAAGTATAAAGGAAGGTGGAAGGATGGGTGGAGCTTGGTTGTAAAGCAAGGAGACTCTTGGCTTTGGAATTCTTTAGCTGGAGCATGGAATGAAATTAATCGTTGGATGGGTTGGGGAATTGGGAATGGTTGTACAGCAAAATTTTGGCTAGATAGATGGGTCAATGGGGAAAGCATTATAGAAGCTATGGATGGGAGTGATATTCCTGATTTTGAAAGAAATATACCTATTAAGGATTTATATTTTAGAAACGGGAGGCTGGAATTGAGAAATCTTTGCAAATAGAGTTAATCAATCAGTATCGTTAGCTATTGCAAGTATAAATTCGCCAGATGAGACAATCAATCTACCTGATTACCCAGTTTGGATTGGTTCTAGGAATGGGGACTATTCGGTGTCAGTAACATATAAAAATCTGCTATCTTTGAAATCTTCAGTTTCAGAAAACAAAATATGGAAAACTATCTGGAATTGGGAAGGGTCATATAGAATATGTTTTTTCCTTTGGCTTGTAGGGTATGAAAGACTCCTCATTAACCATGAAAGGTTTAGAAGGCATATTAGCATATCAGATAATTGCTCGTTTTGCCACAATTGTCGGAAACATTAATTCATGTGTTGAGAGATTGTGTTATTGCCCAGAAAGTGTGGGCAGAATTAGTTCCCGTTAATGTCTCTAATAAATTTTTTAATTGTGACCTGCAGCAGTGGCTTTTGATCAACCTGACGGAGGCACCGATTGAAGATTGGCCAAAACTTTTTGCGGTCGGGTGTTGGTTACTTTGGTCTTGGAGGAACAAAGCTATTTTTGATCCGACGTCAAAATGGCCAGAGAACCCAGCCACAATAGTTCAGAGGACATCGGAAAGATCTGGCCAAGCTTGGAGTTTAGCCATGCCACTTTTGAGAAAGCAAAAGCGTCGGTGGGTGGATATTCATTGGAAGCCTCCACCAAGAAATTACTGGAAATTGAACACTGATGGCTCAGATCATGGAAATCCAGGATGGGTAGGAGCAGGTGGGGTAATCCGGAAGTCTGATGGAACGGTGAAAGGTTTTCAACAAAACCTTGGTTTTGCTACAGCAATTACAGCAGAATTGTGGGGAATACAATCTGGGCTTGAGCTTGCCTGA

mRNA sequence

ATGCTCCCAAAGTTGGTGGGTTTTGAGCCCGAACCAATGACCCATCATATTGGTTGTGTATCGAGGCTTGTGCAGTGGCTTTTGATCAACCTGACGGAGGCACCGATTGAAGATTGGCCAAAACTTTTTGCGGTCGGGTGTTGGTTACTTTGGTCTTGGAGGAACAAAGCTATTTTTGATCCGACGTCAAAATGGCCAGAGAACCCAGCCACAATAGTTCAGAGGACATCGGAAAGATCTGGCCAAGCTTGGAGTTTAGCCATGCCACTTTTGAGAAAGCAAAAGCGTCGGTGGGTGGATATTCATTGGAAGCCTCCACCAAGAAATTACTGGAAATTGAACACTGATGGCTCAGATCATGGAAATCCAGGATGGGTAGGAGCAGGTGGGGTAATCCGGAAGTCTGATGGAACGGTGAAAGGTTTTCAACAAAACCTTGGTTTTGCTACAGCAATTACAGCAGAATTGTGGGGAATACAATCTGGGCTTGAGCTTGCCTGA

Coding sequence (CDS)

ATGCTCCCAAAGTTGGTGGGTTTTGAGCCCGAACCAATGACCCATCATATTGGTTGTGTATCGAGGCTTGTGCAGTGGCTTTTGATCAACCTGACGGAGGCACCGATTGAAGATTGGCCAAAACTTTTTGCGGTCGGGTGTTGGTTACTTTGGTCTTGGAGGAACAAAGCTATTTTTGATCCGACGTCAAAATGGCCAGAGAACCCAGCCACAATAGTTCAGAGGACATCGGAAAGATCTGGCCAAGCTTGGAGTTTAGCCATGCCACTTTTGAGAAAGCAAAAGCGTCGGTGGGTGGATATTCATTGGAAGCCTCCACCAAGAAATTACTGGAAATTGAACACTGATGGCTCAGATCATGGAAATCCAGGATGGGTAGGAGCAGGTGGGGTAATCCGGAAGTCTGATGGAACGGTGAAAGGTTTTCAACAAAACCTTGGTTTTGCTACAGCAATTACAGCAGAATTGTGGGGAATACAATCTGGGCTTGAGCTTGCCTGA

Protein sequence

MLPKLVGFEPEPMTHHIGCVSRLVQWLLINLTEAPIEDWPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSERSGQAWSLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRKSDGTVKGFQQNLGFATAITAELWGIQSGLELA

Homology

[Close]

BLAST of Moc10g26770 vs. NCBI nr
Match: PKI64943.1 (hypothetical protein CRG98_014657 [Punica granatum])

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-29
Identity = 64/143 (44.76%), Postives = 88/143 (61.54%), Query Frame = 0


Query: 25  QWLLINLTEAPIEDWPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSERSGQAW 84
           +WLL NL +    +WP +FA+ CWL+WSWRNK +FDP   +PE+    + RT+    ++W
Sbjct: 419 EWLLSNLGQPFHSNWPSIFAMSCWLIWSWRNKVLFDPDISYPESGTQAIIRTALGFQESW 478

Query: 85  SLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRK-SDGTVKGFQ 144
           + A  +     + W+DI W  PP ++ KLNT GS  GNPG  GAG +IR  S G V GF 
Sbjct: 479 AAARAVGGGSNKDWMDIRWLKPPEDFLKLNTGGSVRGNPGIAGAGALIRNDSGGWVIGFV 538

Query: 145 QNLGFATAITAELWGIQSGLELA 167
           QN+   +    ELWG+ +GLELA
Sbjct: 539 QNIRITSVTMTELWGVLTGLELA 561

[Close]

BLAST of Moc10g26770 vs. NCBI nr
Match: XP_031402735.1 (uncharacterized protein LOC116212324 [Punica granatum])

HSP 1 Score: 136.7 bits (343), Expect = 1.8e-28
Identity = 68/145 (46.90%), Postives = 87/145 (60.00%), Query Frame = 0


Query: 23   LVQWLLINLTEAPIEDWPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSERSGQ 82
            LVQ L I +       W  +F VGCWL+WSWRNK+IFD T   P++    + R +E    
Sbjct: 964  LVQNLSIKVKNQKGISWAVVFGVGCWLMWSWRNKSIFDQTFSRPQDAHVSILRAAESFSV 1023

Query: 83   AWSLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRKSDGT-VKG 142
             W     ++R+  R W  + W  P R + KLNTDG+  GNPG  GAGGV+RK DG     
Sbjct: 1024 GWQ-DQVVVRRTVREWQLVGWNRPSRGWIKLNTDGASKGNPGPAGAGGVLRKEDGVWTAS 1083

Query: 143  FQQNLGFATAITAELWGIQSGLELA 167
            F +N+G ATA+ AELWG+ SGLELA
Sbjct: 1084 FARNVGIATAVVAELWGVLSGLELA 1107

[Close]

BLAST of Moc10g26770 vs. NCBI nr
Match: PKI31543.1 (hypothetical protein CRG98_048066, partial [Punica granatum])

HSP 1 Score: 131.7 bits (330), Expect = 5.7e-27
Identity = 59/145 (40.69%), Postives = 84/145 (57.93%), Query Frame = 0


Query: 23  LVQWLLINLTEAPIEDWPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSERSGQ 82
           L+ WL  NL+    + W   FA  CWLLWSWRN  +F+     P      + +T+    +
Sbjct: 149 LLDWLWQNLSYPYYQHWSTTFATSCWLLWSWRNNELFESDFNCPTLACRTILQTARSFRE 208

Query: 83  AWSLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRKSDGT-VKG 142
            W+L   ++    +RWV+I W  PP +++KLNTDGS  GNPG   A G++R +DG  + G
Sbjct: 209 GWALVEKVIGTTSKRWVNISWIRPPEDFFKLNTDGSSRGNPGAAEASGLLRDADGRWIVG 268

Query: 143 FQQNLGFATAITAELWGIQSGLELA 167
           F QN+G A    AELWG+ +G E+A
Sbjct: 269 FSQNIGIAIVTMAELWGVLTGTEMA 293

[Close]

BLAST of Moc10g26770 vs. NCBI nr
Match: PKI77562.1 (hypothetical protein CRG98_002016 [Punica granatum])

HSP 1 Score: 125.2 bits (313), Expect = 5.4e-25
Identity = 55/135 (40.74%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 23  LVQWLLINLTEAPIEDWPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSERSGQ 82
           L  WL++NL   P EDWP +F  GCWLLW+WRNK +F      P +    +   +    +
Sbjct: 611 LQDWLMLNLVWPPREDWPTIFVTGCWLLWTWRNKELFCTDFDRPSDEGRTILAAARSFRE 670

Query: 83  AWSLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRKSD-GTVKG 142
            W L+   +   K +W+ IHW  PP ++ KLNT+G+  G+ G  GAGG++R S  G + G
Sbjct: 671 GWLLSSQAVDGSKSKWISIHWVKPPEDFMKLNTNGAIRGSQGVTGAGGILRNSSGGWIIG 730

Query: 143 FQQNLGFATAITAEL 157
           F Q+LG +T   AEL
Sbjct: 731 FMQSLGVSTVTVAEL 745

[Close]

BLAST of Moc10g26770 vs. NCBI nr
Match: XP_031376896.1 (uncharacterized protein LOC116192475 [Punica granatum])

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-24
Identity = 62/145 (42.76%), Postives = 82/145 (56.55%), Query Frame = 0


Query: 23  LVQWLLINLTEAPIEDWPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSERSGQ 82
           L  WL++NL     E W  LF V CWLLW WRNK +F+     P +    ++ T+     
Sbjct: 167 LKPWLMLNLGSCD-EKWSTLFGVACWLLWGWRNKGLFEQDFVRPRDEVRAIRATAHNFEH 226

Query: 83  AWSLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRKSDG-TVKG 142
           A  L      + +R W  I W+ PP  + K+NTDG+  GNPG  GAGG++R  DG  + G
Sbjct: 227 ARDLRSN-TSQPRREWRWIQWRRPPPGWVKVNTDGASRGNPGIAGAGGLLRNDDGHWICG 286

Query: 143 FQQNLGFATAITAELWGIQSGLELA 167
           F  N+GFAT+  AELWG   GL+LA
Sbjct: 287 FLHNVGFATSTIAELWGALVGLQLA 309

[Close]

BLAST of Moc10g26770 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.4e-13
Identity = 54/148 (36.49%), Postives = 72/148 (48.65%), Query Frame = 0


Query: 23  LVQWLLINLTE-APIED--WPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSER 82
           L +WL  NL + +  ED  W  +FAV  W  W WR   IF   +K  +     V+  +  
Sbjct: 370 LFEWLYDNLGDRSGCEDIPWSTIFAVIIWWGWKWRCGNIFGENTKCRDR-VKFVKEWAVE 429

Query: 83  SGQAWSLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRKSDGT- 142
             +A S  + +   Q R    I W  P   + K+NTDG+  GNPG   AGGV+R   G  
Sbjct: 430 VYRAHSGNVLVGITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAW 489

Query: 143 VKGFQQNLGFATAITAELWGIQSGLELA 167
             GF  N+G  +A  AELWG+  GL  A
Sbjct: 490 CGGFSLNIGRCSAPQAELWGVYYGLYFA 516

[Close]

BLAST of Moc10g26770 vs. ExPASy TrEMBL
Match: A0A2I0KA00 (RNase H domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_014657 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.0e-29
Identity = 64/143 (44.76%), Postives = 88/143 (61.54%), Query Frame = 0


Query: 25  QWLLINLTEAPIEDWPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSERSGQAW 84
           +WLL NL +    +WP +FA+ CWL+WSWRNK +FDP   +PE+    + RT+    ++W
Sbjct: 419 EWLLSNLGQPFHSNWPSIFAMSCWLIWSWRNKVLFDPDISYPESGTQAIIRTALGFQESW 478

Query: 85  SLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRK-SDGTVKGFQ 144
           + A  +     + W+DI W  PP ++ KLNT GS  GNPG  GAG +IR  S G V GF 
Sbjct: 479 AAARAVGGGSNKDWMDIRWLKPPEDFLKLNTGGSVRGNPGIAGAGALIRNDSGGWVIGFV 538

Query: 145 QNLGFATAITAELWGIQSGLELA 167
           QN+   +    ELWG+ +GLELA
Sbjct: 539 QNIRITSVTMTELWGVLTGLELA 561

[Close]

BLAST of Moc10g26770 vs. ExPASy TrEMBL
Match: A0A6P8E5K3 (uncharacterized protein LOC116212324 OS=Punica granatum OX=22663 GN=LOC116212324 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 8.6e-29
Identity = 68/145 (46.90%), Postives = 87/145 (60.00%), Query Frame = 0


Query: 23   LVQWLLINLTEAPIEDWPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSERSGQ 82
            LVQ L I +       W  +F VGCWL+WSWRNK+IFD T   P++    + R +E    
Sbjct: 964  LVQNLSIKVKNQKGISWAVVFGVGCWLMWSWRNKSIFDQTFSRPQDAHVSILRAAESFSV 1023

Query: 83   AWSLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRKSDGT-VKG 142
             W     ++R+  R W  + W  P R + KLNTDG+  GNPG  GAGGV+RK DG     
Sbjct: 1024 GWQ-DQVVVRRTVREWQLVGWNRPSRGWIKLNTDGASKGNPGPAGAGGVLRKEDGVWTAS 1083

Query: 143  FQQNLGFATAITAELWGIQSGLELA 167
            F +N+G ATA+ AELWG+ SGLELA
Sbjct: 1084 FARNVGIATAVVAELWGVLSGLELA 1107

[Close]

BLAST of Moc10g26770 vs. ExPASy TrEMBL
Match: A0A2I0HIV6 (Uncharacterized protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_048066 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.8e-27
Identity = 59/145 (40.69%), Postives = 84/145 (57.93%), Query Frame = 0


Query: 23  LVQWLLINLTEAPIEDWPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSERSGQ 82
           L+ WL  NL+    + W   FA  CWLLWSWRN  +F+     P      + +T+    +
Sbjct: 149 LLDWLWQNLSYPYYQHWSTTFATSCWLLWSWRNNELFESDFNCPTLACRTILQTARSFRE 208

Query: 83  AWSLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRKSDGT-VKG 142
            W+L   ++    +RWV+I W  PP +++KLNTDGS  GNPG   A G++R +DG  + G
Sbjct: 209 GWALVEKVIGTTSKRWVNISWIRPPEDFFKLNTDGSSRGNPGAAEASGLLRDADGRWIVG 268

Query: 143 FQQNLGFATAITAELWGIQSGLELA 167
           F QN+G A    AELWG+ +G E+A
Sbjct: 269 FSQNIGIAIVTMAELWGVLTGTEMA 293

[Close]

BLAST of Moc10g26770 vs. ExPASy TrEMBL
Match: A0A2I0LA42 (Reverse transcriptase domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_002016 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.6e-25
Identity = 55/135 (40.74%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 23  LVQWLLINLTEAPIEDWPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSERSGQ 82
           L  WL++NL   P EDWP +F  GCWLLW+WRNK +F      P +    +   +    +
Sbjct: 611 LQDWLMLNLVWPPREDWPTIFVTGCWLLWTWRNKELFCTDFDRPSDEGRTILAAARSFRE 670

Query: 83  AWSLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRKSD-GTVKG 142
            W L+   +   K +W+ IHW  PP ++ KLNT+G+  G+ G  GAGG++R S  G + G
Sbjct: 671 GWLLSSQAVDGSKSKWISIHWVKPPEDFMKLNTNGAIRGSQGVTGAGGILRNSSGGWIIG 730

Query: 143 FQQNLGFATAITAEL 157
           F Q+LG +T   AEL
Sbjct: 731 FMQSLGVSTVTVAEL 745

[Close]

BLAST of Moc10g26770 vs. ExPASy TrEMBL
Match: A0A6P8C599 (uncharacterized protein LOC116192475 OS=Punica granatum OX=22663 GN=LOC116192475 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.3e-24
Identity = 62/145 (42.76%), Postives = 82/145 (56.55%), Query Frame = 0


Query: 23  LVQWLLINLTEAPIEDWPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSERSGQ 82
           L  WL++NL     E W  LF V CWLLW WRNK +F+     P +    ++ T+     
Sbjct: 167 LKPWLMLNLGSCD-EKWSTLFGVACWLLWGWRNKGLFEQDFVRPRDEVRAIRATAHNFEH 226

Query: 83  AWSLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRKSDG-TVKG 142
           A  L      + +R W  I W+ PP  + K+NTDG+  GNPG  GAGG++R  DG  + G
Sbjct: 227 ARDLRSN-TSQPRREWRWIQWRRPPPGWVKVNTDGASRGNPGIAGAGGLLRNDDGHWICG 286

Query: 143 FQQNLGFATAITAELWGIQSGLELA 167
           F  N+GFAT+  AELWG   GL+LA
Sbjct: 287 FLHNVGFATSTIAELWGALVGLQLA 309

[Close]

BLAST of Moc10g26770 vs. TAIR 10
Match: AT5G42905.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 4.5e-14
Identity = 53/150 (35.33%), Postives = 73/150 (48.67%), Query Frame = 0


Query: 23  LVQWLLINLTE-APIED--WPKLFAVGCWLLWSWRNKAIFDPTSKWPENPATIVQRTSE- 82
           L +WL  NL + +  ED  W  +FAV  W  W WR   IF   +K  +    + +   E 
Sbjct: 58  LFEWLYDNLCDRSSCEDIPWSTIFAVIIWWGWKWRCSNIFGENTKCRDRVKFVKEWVVEV 117

Query: 83  -RSGQAWSLAMPLLRKQKRRWVDIHWKPPPRNYWKLNTDGSDHGNPGWVGAGGVIRKSDG 142
            R+    +L      + +R    I W  P   + K+NTDG+  GNPG   AGGV+R  +G
Sbjct: 118 YRAHLGNALVGSTQPRVERL---IGWVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCEG 177

Query: 143 T-VKGFQQNLGFATAITAELWGIQSGLELA 167
               GF  N+G  +A  AELWG+  GL  A
Sbjct: 178 AWCGGFSLNIGRCSAQHAELWGVYYGLYFA 204

The following BLAST results are available for this feature:

BLAST of Moc10g26770 vs. NCBI nr


Match Name	E-value	Identity	Description
PKI64943.1	2.1e-29	44.76	hypothetical protein CRG98_014657 [Punica granatum]	[more]
XP_031402735.1	1.8e-28	46.90	uncharacterized protein LOC116212324 [Punica granatum]	[more]
PKI31543.1	5.7e-27	40.69	hypothetical protein CRG98_048066, partial [Punica granatum]	[more]
PKI77562.1	5.4e-25	40.74	hypothetical protein CRG98_002016 [Punica granatum]	[more]
XP_031376896.1	2.7e-24	42.76	uncharacterized protein LOC116192475 [Punica granatum]	[more]

BLAST of Moc10g26770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	6.4e-13	36.49	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Moc10g26770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2I0KA00	1.0e-29	44.76	RNase H domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_014657 PE...	[more]
A0A6P8E5K3	8.6e-29	46.90	uncharacterized protein LOC116212324 OS=Punica granatum OX=22663 GN=LOC116212324...	[more]
A0A2I0HIV6	2.8e-27	40.69	Uncharacterized protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_048066 P...	[more]
A0A2I0LA42	2.6e-25	40.74	Reverse transcriptase domain-containing protein OS=Punica granatum OX=22663 GN=C...	[more]
A0A6P8C599	1.3e-24	42.76	uncharacterized protein LOC116192475 OS=Punica granatum OX=22663 GN=LOC116192475...	[more]

BLAST of Moc10g26770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42905.1	4.5e-14	35.33	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 109..166 e-value: 7.1E-8 score: 34.4
None	No IPR available	PANTHER	PTHR47074:SF17	PUTATIVE-RELATED	coord: 95..166
None	No IPR available	PANTHER	PTHR47074	BNAC02G40300D PROTEIN	coord: 95..166
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 113..166 e-value: 9.02976E-11 score: 54.2424
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 109..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc10g26770.1	Moc10g26770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003676	nucleic acid binding