Moc10g23780 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g23780
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Locationchr10: 17096093 .. 17101987 (+)
RNA-Seq ExpressionMoc10g23780
SyntenyMoc10g23780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTATCCTATGAGATGCGATGGAGGCTGCCAGTGAAATGTTTTACAAACAAAGGAGAAGAAGCCGTCGGAGACAACGAAGACGTCGACGAGATGCTTCAGAGGAGACGAAGCCCGATGGTCGGAGCGATGAAAGAATATCAACAAAGATGAAGGAGGTTACGAAATTTTAGGGTTTTAGGAATTTCAGTTTTGGAAATTTGAATTAGCCTAATTTTAGGGATTTGATATATTTTAATAATTATTTACCGTTTTCATATTTTATTAATGATTTAATATTGATATGAATATATTAGTAATTTTTATTATGGGTACCATATAATTTGAGAATTATTTTAGACATAAGTGTAAATTCTAGACCTTTCAATCCGTTTATGTAATTAGAACTCCTAAATAGACCATCTATGTACTAATCCCTAATGTCTTGGACGAGCTGTTTTAGAAACTTATTTTCACAAATGTTTAAGATTTTTCAATTTTACACTTTTAGATTTATGGATTTATGAATTTTTATTAATGCCAAGTTTACCCTTATTTATGACATTTATATTTATTATTGTTAGTTTTTTTTATTTAAACGTAAAAATATTAAATGTTCCAAATTTGATTTTCTAAACCTTTAATTATTGTGGGTCCCAAATCAATTATTTTCATAATCCCTTAATTTACTTCTTGATATATTCTACTAAATAATAAAAATTATTACAAAAATATTTACCCATGATGTCATTCCAATTTTTGCCTAGATTTAACTACATTTCAAATTCAAAATTTTGCTCAATCAATTTAAGATTTGCTGGAGAGCATTAGAGGAAATTTGTCGGTACTATGAGGTAAGATGATAATAGAATTATCGATATTTTTTTATCGCTTAAATTTTCATTTATATGAAGATATAAACTATATCCGAGTATAATCTATAACCATTATAACACACACTTACATGAAGATATTGATGGAACTCTTAGACATGCATAGCGGAAGCTGAGGATCATAATACACTTAATGAAGCAATTTAACTAAAATAAGCATGCTTGAAAAATGATGAAAAAGGTAAAGAGAAAGAGATTAACTTTATACCTTTGAAGACCTCCATTATAACTTCTTCTCCTAACTCAATGGGACCACCAACGACAAATCCGTGCTATCCTCGGGTTGATGAACACGGTTGTGGGACCGAATTTTGAGTGAAAACAAAGGGAAAACACTAATGACTAGGAGAAGACAATAGAAATTTGAGTGGAAAAATTCTGCACTTATGCAATGAAGCATTGGCCTTATCCAAGTGATTTTCATCACCTATATAAAGACCAAATGCATGCAAGGACAAGCCTTGCATGCCTTCCACTTCAAACTCCACTAGCATGTAAAAGATAGGTGTCATTGCCTTGAAGAAACACTTCAAAAACCACTAGTTAGTGGAAAAATCCAACTAACTTGATTTTTTAAATAGAACTTTGATAAAATTAATTTTTATAAAAACAAAAATTGAAATATCAATTTTCTATTAAAACAAAAACCAAGCCAAATCAATATCTCATATTAATTGGTCATTGACACCTAAGCTTGATTAATCACATTAATCAAATTACAACTCTTTTTCATGCTTTGAACTTATTTAAAACTAATTTAAATAAGTCATACTCTCCATAATAATTAAATGTCAATTAAATTATATATTATATCTCATATAAAATACAATATTCCCTTAAAAACCGAATTTGAACACTTTAAATTCTTGCTTCACCTAGTTCATCAATTTTATCCTTTATGAGCTAGCATGGAGACCCGTTGGACCTACAGATCATGGGCTCCAACGATTCGAGACTAACCGGTCAAACTCTTTAACTCAGTTAATCAACATTCGTTAACTAACAGGACTGTCCACTATAGCCTGTAGATGCACTCCCCTCACTGTAGATATATTTGTGTCCATTCGATATAACCGTCATCGATAAGTTGATCTTTCACAAGCCGTTCGTAACCTCAGCTAGGTCGAAAAACTGTTTTACCCCTGAGTTACATCTTTTCTCCTTAAGTACCACTATCCCTCTAATGAACAATTGATTTAGGATCAAATCACTAAATCCAATTCCTCTCGGGCCAGTGAGAGGATGGGGCCCCTTGTTCAAGATCCAGGATCAGCTCTTAAGGGAACAACCTCTCTACTATCCTTAAATCGGGTAGGAGTGAATTATGTCTTGCTAATTCTATGTCCCCAGCTATCTACCCAGTCTTATCCCTGAAATGGGAGGCATATTGAGCAGCGCTGATGAGCTTACTCTCACCTATGCAGATCAAGGGAGAATCCTGAATAAATAGGAATGCATAGTTGGCTCAGGATTTAGATCAAGTTATTTAGGTCATCGATAAACGAAATTAATCAGTGTTATCCGTAAACGGTGTTAATATGTAACAGTGATTATTTCAGGGTCAGTCTTACACAATCTCATTGTGTAGAACACCCCTGCTCACATGTTTCTACACGAACGAATCAGGATCACTTCATTTATGACACCTTACAACATTTGTAACAATCATAAAGCGGGCCGTATTCAATAGTGTCTCCAGGAAAAGGTACCCAACTTGATCCATGTACTATTAGACTGTTTAGGCTATTTACTTGAACTTGATCCAGTTTATGTCTCCACATAAAGTCCAAGTACTCATTATAATAGCCAAGGATTCGTAGTTTATTGGATTTATTAAAAAACAAATTCACTTTCATTTAACAACACTTGTTTGAATAACCTCACATTAATGTTCACTGTTTACAAACTACGAGTTTTAGGACATAGTACCCAACAGATATAAACTATATCTGGCTATAAACGATAACTTATATATGAACTATAAAATATATACGGCTATATCCCTCTACAATTAACAAACAAAGCTAATAACCTACATAATCAAATATATACGACATTACCATCGAATACTTTTTAAATAACCCAAAATCGAACATCCAAAATCGAACACCCAAAATCAAAAATAAAAAACAAACCTAGAATATTTAAAACGTAAACGACAAAAAACAAGCTATCGGAAACAATGGTGAAAAGCGAGCGAATTGAAAACGGGCTGCCGGATACAGTAACGACAAAAAACGAAAACACTAAGAAGATAAGGAGATGGCCTGCTGGAAACAATTGTGAAAAGTGAGAGAAAAGAAGACGAATGAAGAAGATGGAGAGATAATTAAAAAGTTTGGAAGTTTTGTTTTTTTAGTAAAGTGAATATAAATTTAGGGATTTAAAAAGTAAACCCCAAAATCAATTTCATCTATAAGAAGTGTACTTTAAGACAAAAAAATGTAAATTTTGTAAAATGAATCTCTTTATGTAATTATCATCTCCAAAGGGTCTACCAATGTAATAATCCCTTCACTTTTACTATACATTTCTAAAAATTTTAGTGTTTAATTTTCACAATTGATAGTTTATAGGTGCAATAGTAACATCTACCATACTACATGAGTGGTAATATGATCATAATTGGCCTCAAGTCCTTGGAGCCAACTCAAGCTAAGATGAGAGCACCACCGCACACGAAATGCCCACGGCGCGCACGTGTACAACATCAACAGCCGGCTAACCTCACAAGGCGTAACCCCGCACGCACCTGCCTGTTGGGTTTTATGCCCTGAACTCGTGGTTTGTAAACATAAAACAAATATTCATTCAATAAATTTGTTATTGATGTTTCTCTTAGAATTTCATTAACCAAAATCCAATAAACTAATATCTGAGGTTACGTCATGTAACTGAAACAGTATATAACAGATATACAGTATATATTTAATATAAAACGTATATATTTGATATACATTATATATATATATATATATATATATATATATACAATATATATTCGATATACAGGTGGATAATGTTCCAGTAGTAACCTAAAAGGTCTATAGTATATGGATAAGGTTGGGTATCTTATCCTGATAACACTATGGATACGGCCCACTTTGTAATAGTTACAAATCACTTGATCCAAGTCGTTGGTGTGGAGACATGTAAGTGGGGGTATCCTATACAATAAGTTTGTATAAGACTGGACCACGAAATAATTAATCTTTAGCTGTAACAATGTTAGCTAATAGATTAATATTTCAAAAGGATGATCGTGTACATTGATCTCAATCCGGAGTGAGTTATGAACTCTTGCCTATTAGGGCTCATCCTTTGATTTGTATGGGTGACAGTGGCCTAAGTCGCCGACTCAATATTCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGAGAACATAACTACACAAGATGAAATTCACTCCTTCCCAACTTTAGGGTAAGTAGATAAGTGTTCTCTTAAGTGCTGACTCCGAGACTTGAACAAGGGGTCACACCCTCTCACTGGTCCAAGAGGGACTTTCAGTTATTGGTTAGACCATAACCGGGTTGTTCATTAGAGGATCAGCGGTACTTAAGGTACAAGATGTAACAGAGGGGTAAAATGGTAATTTGACCAAACTGTGGTTACAAACACTCGTGAAGAATTGACTTACCGTTAATGGTCAAAAGCCATGGACGCAAAATATTCTACCGTGAAAAGAGTGCAACTGTGGGTCTTTAGTGGAGTGACCGACAGTTAACGAATGTTGATTAATATGGTTAATAAGTTTAATCAATTAATCTCGTATCGTTTGAGCTTTCGATCTGTAGGTCCATTATGTCCCCTTGCTAGCTTGTAAAGGATAGTTAAGAACATTTAGTCTTCAAAAGAATTTGAATTGTTCAAATTAGTTGAAGGGAATTAAGGCTAATTGTATAAGATGCAATTAATATAATGTATGTTGATACATTATAATATAAAATTAATTTTGAATTCGATTCAAAATGATGAGAGAGATGAATATTAGAATTTGATTCTAATATAGTTGATTAATTTAAGTTTAATTTAATTAAATATGATCTAATTAAATTAATGTGATATATTAATTTGGTTAAATTAAATTAGATTTCGTTAAATTAAATTAATAATGATTTTTTGTAATTAATTAAATTAGATTTAATTAATTATTATTTTAATTAAAAAAAGAAAAAAAAAGAAAATAGGAAGAAAACCTCTCACTTTCCACCAGGGAAGTGAGTGGGGGAGTGGTGACTTTCTCCTCACTCCTCCTCCCCTATATAACGGAGGTTCTCCCATTTCTTTCAGTAGCCCGAATGTTGATTGATAAAGTTTCTGAAACTCCAACGAGAAAATCTCTCTCTCAATTTCTCAATTTCCCTTTCAACTATAAGACGATTCCCACAAACCGAGTTCTTAACTTCCAGAGGATAACGAGGAAGACTTTGTGGTGGTGTTGGTGTTTACATCGAAGAGGTGTCTTTAAAGGTATGTATCATTAACTTTTTTTTATTCATGCTTATGTATTTTCTTTGTTGTAATTCTAAAACAAGATTGAAGCACACGCGTTCGCGCACTTCCGCTGTAGGATCCGATCTCTTCACCGCAGCATCCACAGCTCGTGCATGCTTGCACTCGCGCCCCCACCTGCTGCCAACGCACACGCGTGCCCCAGCCTTGCCAGCGCCCACACACTTCCACCATGCTAACCTCACAAGAGGCCATCGCCATCGCCAGTACGCGCGCCTGTCGGATGCCTGCCTATCGCCTAGCGACCACACTCGCGCGTCCTTCCTGCCACTAGCGTGCCCTTACCTCGCCAACCTCACAGCACCCTCGACCGTGCAACCACGCGCATCACTGTCGTGCCAACCTCCCAGCATGGCCCTATTGCGTGCGCCGCACGCCCCTGTATCGCGCTCACGTCTCACCTATCGCCAAACACCCATGCCCTGGCACCTCTGCTCAGCGCCACGCATTTGCCCACTTAGCGCCATGCGCATACCCCGTTAG

mRNA sequence

ATGTTATCCTATGAGATGCGATGGAGGCTGCCAGTGAAATGTTTTACAAACAAAGGAGAAGAAGCCGTCGGAGACAACGAAGACGTCGACGAGATGCTTCAGAGGAGACGAAGCCCGATGGATCAAATCACTAAATCCAATTCCTCTCGGGCCAGTGAGAGGATGGGGCCCCTTGTTCAAGATCCAGGATCAGCTCTTAAGGGAACAACCTCTCTACTATCCTTAAATCGGTGGCCTAAGTCGCCGACTCAATATTCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGAGAACATAACTACACAAGATGAAATTCACTCCTTCCCAACTTTAGGATTGAAGCACACGCGTTCGCGCACTTCCGCTGTAGGATCCGATCTCTTCACCGCAGCATCCACAGCTCGTGCATGCTTGCACTCGCGCCCCCACCTGCTGCCAACGCACACGCGTGCCCCAGCCTTGCCAGCGCCCACACACTTCCACCATGCTAACCTCACAAGAGGCCATCGCCATCGCCAGTACGCGCGCCTGTCGGATGCCTGCCTATCGCCTAGCGACCACACTCGCGCGTCCTTCCTGCCACTAGCGTGCCCTTACCTCGCCAACCTCACAGCACCCTCGACCGTGCAACCACGCGCATCACTGTCGTGCCAACCTCCCAGCATGGCCCTATTGCGTGCGCCGCACGCCCCTGTATCGCGCTCACGTCTCACCTATCGCCAAACACCCATGCCCTGGCACCTCTGCTCAGCGCCACGCATTTGCCCACTTAGCGCCATGCGCATACCCCGTTAG

Coding sequence (CDS)

ATGTTATCCTATGAGATGCGATGGAGGCTGCCAGTGAAATGTTTTACAAACAAAGGAGAAGAAGCCGTCGGAGACAACGAAGACGTCGACGAGATGCTTCAGAGGAGACGAAGCCCGATGGATCAAATCACTAAATCCAATTCCTCTCGGGCCAGTGAGAGGATGGGGCCCCTTGTTCAAGATCCAGGATCAGCTCTTAAGGGAACAACCTCTCTACTATCCTTAAATCGGTGGCCTAAGTCGCCGACTCAATATTCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGAGAACATAACTACACAAGATGAAATTCACTCCTTCCCAACTTTAGGATTGAAGCACACGCGTTCGCGCACTTCCGCTGTAGGATCCGATCTCTTCACCGCAGCATCCACAGCTCGTGCATGCTTGCACTCGCGCCCCCACCTGCTGCCAACGCACACGCGTGCCCCAGCCTTGCCAGCGCCCACACACTTCCACCATGCTAACCTCACAAGAGGCCATCGCCATCGCCAGTACGCGCGCCTGTCGGATGCCTGCCTATCGCCTAGCGACCACACTCGCGCGTCCTTCCTGCCACTAGCGTGCCCTTACCTCGCCAACCTCACAGCACCCTCGACCGTGCAACCACGCGCATCACTGTCGTGCCAACCTCCCAGCATGGCCCTATTGCGTGCGCCGCACGCCCCTGTATCGCGCTCACGTCTCACCTATCGCCAAACACCCATGCCCTGGCACCTCTGCTCAGCGCCACGCATTTGCCCACTTAGCGCCATGCGCATACCCCGTTAG

Protein sequence

MLSYEMRWRLPVKCFTNKGEEAVGDNEDVDEMLQRRRSPMDQITKSNSSRASERMGPLVQDPGSALKGTTSLLSLNRWPKSPTQYSYHFGDKTEWGAENITTQDEIHSFPTLGLKHTRSRTSAVGSDLFTAASTARACLHSRPHLLPTHTRAPALPAPTHFHHANLTRGHRHRQYARLSDACLSPSDHTRASFLPLACPYLANLTAPSTVQPRASLSCQPPSMALLRAPHAPVSRSRLTYRQTPMPWHLCSAPRICPLSAMRIPR
Homology
[Close]
BLAST of Moc10g23780 vs. NCBI nr
Match: KAA0040839.1 (uncharacterized protein E6C27_scaffold333G00600 [Cucumis melo var. makuwa] >TYK17815.1 uncharacterized protein E5676_scaffold306G00640 [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 8.1e-07
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 77  RWPKSPTQYSYHFGDKTEWGAENITTQDEIHSFPTLG 114
           R  K PTQY+YHFGDKT+WGA NI TQDEIHSF TLG
Sbjct: 27  RVAKLPTQYAYHFGDKTKWGAGNIITQDEIHSFATLG 63

[Close]
BLAST of Moc10g23780 vs. NCBI nr
Match: KAA0042877.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK05280.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-06
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 77  RWPKSPTQYSYHFGDKTEWGAENITTQDEIHSFPTLGL 115
           R  K  TQY+YHFGDKTEWGAENI TQD IHSFP LG+
Sbjct: 757 RVAKLSTQYAYHFGDKTEWGAENIITQDGIHSFPPLGV 794

[Close]
BLAST of Moc10g23780 vs. NCBI nr
Match: KAA0025994.1 (retrotransposon protein putative ty3-gypsy sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-06
Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = 0 

Query: 73  LSLNRWPKSPTQYSYHFGDKTEWGAENITTQDEIHSFPTLG 114
           +SL R  + PTQY+YHFGDKTEWGA N  TQD IHSFP LG
Sbjct: 220 ISLVRVARLPTQYAYHFGDKTEWGAGNTITQDGIHSFPPLG 260

[Close]
BLAST of Moc10g23780 vs. NCBI nr
Match: KAA0065950.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa] >TYK30278.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-06
Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 0 

Query: 77  RWPKSPTQYSYHFGDKTEWGAENITTQDEIHSFPTLG 114
           R  + PTQY+YHFGDKTEWGA NI TQD IHSFP LG
Sbjct: 98  RVARLPTQYAYHFGDKTEWGAGNIITQDGIHSFPLLG 134

[Close]
BLAST of Moc10g23780 vs. NCBI nr
Match: TYK19425.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-06
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 82  PTQYSYHFGDKTEWGAENITTQDEIHSFPTLG 114
           PTQY+YHFGDKTEWGA NITTQD IH FP LG
Sbjct: 410 PTQYAYHFGDKTEWGAGNITTQDGIHFFPPLG 441

[Close]
BLAST of Moc10g23780 vs. ExPASy TrEMBL
Match: A0A5A7THR9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00640 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.9e-07
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 77  RWPKSPTQYSYHFGDKTEWGAENITTQDEIHSFPTLG 114
           R  K PTQY+YHFGDKT+WGA NI TQDEIHSF TLG
Sbjct: 27  RVAKLPTQYAYHFGDKTKWGAGNIITQDEIHSFATLG 63

[Close]
BLAST of Moc10g23780 vs. ExPASy TrEMBL
Match: A0A5D3C1P5 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00970 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.1e-07
Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 77  RWPKSPTQYSYHFGDKTEWGAENITTQDEIHSFPTLGL 115
           R  K  TQY+YHFGDKTEWGAENI TQD IHSFP LG+
Sbjct: 757 RVAKLSTQYAYHFGDKTEWGAENIITQDGIHSFPPLGV 794

[Close]
BLAST of Moc10g23780 vs. ExPASy TrEMBL
Match: A0A5A7SJY0 (Retrotransposon protein putative ty3-gypsy sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003160 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.7e-07
Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = 0 

Query: 73  LSLNRWPKSPTQYSYHFGDKTEWGAENITTQDEIHSFPTLG 114
           +SL R  + PTQY+YHFGDKTEWGA N  TQD IHSFP LG
Sbjct: 220 ISLVRVARLPTQYAYHFGDKTEWGAGNTITQDGIHSFPPLG 260

[Close]
BLAST of Moc10g23780 vs. ExPASy TrEMBL
Match: A0A5A7VFG5 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00390 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-06
Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 0 

Query: 77  RWPKSPTQYSYHFGDKTEWGAENITTQDEIHSFPTLG 114
           R  + PTQY+YHFGDKTEWGA NI TQD IHSFP LG
Sbjct: 98  RVARLPTQYAYHFGDKTEWGAGNIITQDGIHSFPLLG 134

[Close]
BLAST of Moc10g23780 vs. ExPASy TrEMBL
Match: A0A5D3D7C0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00670 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-06
Identity = 27/32 (84.38%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 82  PTQYSYHFGDKTEWGAENITTQDEIHSFPTLG 114
           PTQY+YHFGDKTEWGA NITTQD IH FP LG
Sbjct: 410 PTQYAYHFGDKTEWGAGNITTQDGIHFFPPLG 441

The following BLAST results are available for this feature:
BLAST of Moc10g23780 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0040839.18.1e-0778.38uncharacterized protein E6C27_scaffold333G00600 [Cucumis melo var. makuwa] >TYK1... [more]
KAA0042877.11.1e-0676.32gag-pol polyprotein [Cucumis melo var. makuwa] >TYK05280.1 gag-pol polyprotein [... [more]
KAA0025994.11.4e-0670.73retrotransposon protein putative ty3-gypsy sub-class [Cucumis melo var. makuwa][more]
KAA0065950.12.3e-0675.68ty1-copia retrotransposon protein [Cucumis melo var. makuwa] >TYK30278.1 ty1-cop... [more]
TYK19425.13.1e-0684.38gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of Moc10g23780 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc10g23780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7THR93.9e-0778.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C1P55.1e-0776.32Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G... [more]
A0A5A7SJY06.7e-0770.73Retrotransposon protein putative ty3-gypsy sub-class OS=Cucumis melo var. makuwa... [more]
A0A5A7VFG51.1e-0675.68Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3D7C01.5e-0684.38Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G0067... [more]
BLAST of Moc10g23780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc10g23780.1Moc10g23780.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding