Moc09g10580 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g10580
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Pentatricopeptide repeat-containing protein
Location	chr9: 8983267 .. 8984058 (+)
RNA-Seq Expression	Moc09g10580
Synteny	Moc09g10580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATATGAAATGTGGATCAGTTGAGAATGGTTGTAAGGTGTTTGAACATATGGTGCAAAGGGATTGTGTCTCATGGAATGCTATGATAGTTGGATATGCACAAAATGGCTTTGGTAATGAGGCCCTTGGAGTTTTCAGTAAAATGTTAGAATTAGGAGAGAAACCAGATCATGTCACGATGATTGGTGTTCTTTGCGCTTGTAGTCATGCCGGGCTGCTTGATGAAGGCCGCCATTACTTTCAATCCATGAGTGCACAACATGGCTTGGTGTCATTGAAAGATCATTATACATGTATGGTTGATTTACTAGGCCGAGCTGGCTGCCTTGAAGAAGCAAAAGATCTAATAGAGGAAATGCCGATGCAGCCTGATGCTGTCATCTGGGGATCCTTGCTTGCCGCTTGTAAAGTCCATCGGAACATCAAATTGGGGGAATATGTAGTAGAGAAGCTTTTAGAGGTAGATGCTGAGACTTCTGGACCATATGTTCTTCTCTCGAATATGTATGCTGAACGTGGAGATTGGGGGAATGTTGTGAGAATAAGAAAGCTGATGAGAAAGAGAGGAGTGGTTAAACATCCAGGTTGCAGTTGGATTGAAATTCAGGGTCAGTTGAATGTTTTTATGGTTAAGGATAAAAAGCATCCAAAGAAGAAAGAAATCTACACGCTTTTGAGAACACTTCTAAAACAGATGAGACGAGTTGGATATGTCCCATATGTTGTCAGCAATGAAATTGATGAAGAAGAGATGAAAGAACATGACAATGTCCTCGTCTTACCAAATTGA

mRNA sequence

ATGTATATGAAATGTGGATCAGTTGAGAATGGTTGTAAGGTGTTTGAACATATGGTGCAAAGGGATTGTGTCTCATGGAATGCTATGATAGTTGGATATGCACAAAATGGCTTTGGTAATGAGGCCCTTGGAGTTTTCAGTAAAATGTTAGAATTAGGAGAGAAACCAGATCATGTCACGATGATTGGTGTTCTTTGCGCTTGTAGTCATGCCGGGCTGCTTGATGAAGGCCGCCATTACTTTCAATCCATGAGTGCACAACATGGCTTGGTGTCATTGAAAGATCATTATACATGTATGGTTGATTTACTAGGCCGAGCTGGCTGCCTTGAAGAAGCAAAAGATCTAATAGAGGAAATGCCGATGCAGCCTGATGCTGTCATCTGGGGATCCTTGCTTGCCGCTTGTAAAGTCCATCGGAACATCAAATTGGGGGAATATGTAGTAGAGAAGCTTTTAGAGGTAGATGCTGAGACTTCTGGACCATATGTTCTTCTCTCGAATATGTATGCTGAACGTGGAGATTGGGGGAATGTTGTGAGAATAAGAAAGCTGATGAGAAAGAGAGGAGTGGTTAAACATCCAGGTTGCAGTTGGATTGAAATTCAGGGTCAGTTGAATGTTTTTATGGTTAAGGATAAAAAGCATCCAAAGAAGAAAGAAATCTACACGCTTTTGAGAACACTTCTAAAACAGATGAGACGAGTTGGATATGTCCCATATGTTGTCAGCAATGAAATTGATGAAGAAGAGATGAAAGAACATGACAATGTCCTCGTCTTACCAAATTGA

Coding sequence (CDS)

ATGTATATGAAATGTGGATCAGTTGAGAATGGTTGTAAGGTGTTTGAACATATGGTGCAAAGGGATTGTGTCTCATGGAATGCTATGATAGTTGGATATGCACAAAATGGCTTTGGTAATGAGGCCCTTGGAGTTTTCAGTAAAATGTTAGAATTAGGAGAGAAACCAGATCATGTCACGATGATTGGTGTTCTTTGCGCTTGTAGTCATGCCGGGCTGCTTGATGAAGGCCGCCATTACTTTCAATCCATGAGTGCACAACATGGCTTGGTGTCATTGAAAGATCATTATACATGTATGGTTGATTTACTAGGCCGAGCTGGCTGCCTTGAAGAAGCAAAAGATCTAATAGAGGAAATGCCGATGCAGCCTGATGCTGTCATCTGGGGATCCTTGCTTGCCGCTTGTAAAGTCCATCGGAACATCAAATTGGGGGAATATGTAGTAGAGAAGCTTTTAGAGGTAGATGCTGAGACTTCTGGACCATATGTTCTTCTCTCGAATATGTATGCTGAACGTGGAGATTGGGGGAATGTTGTGAGAATAAGAAAGCTGATGAGAAAGAGAGGAGTGGTTAAACATCCAGGTTGCAGTTGGATTGAAATTCAGGGTCAGTTGAATGTTTTTATGGTTAAGGATAAAAAGCATCCAAAGAAGAAAGAAATCTACACGCTTTTGAGAACACTTCTAAAACAGATGAGACGAGTTGGATATGTCCCATATGTTGTCAGCAATGAAATTGATGAAGAAGAGATGAAAGAACATGACAATGTCCTCGTCTTACCAAATTGA

Protein sequence

MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN

Homology

[Close]

BLAST of Moc09g10580 vs. NCBI nr
Match: XP_022159229.1 (pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia])

HSP 1 Score: 549.7 bits (1415), Expect = 1.4e-152
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT
Sbjct: 435 MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 494

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM
Sbjct: 495 MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 554

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV
Sbjct: 555 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 614

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
           RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP
Sbjct: 615 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 674

Query: 241 YVVSNEIDEEEMKEHDNVLVLPN 264
           YVVSNEIDEEEMKEHDNVLVLPN
Sbjct: 675 YVVSNEIDEEEMKEHDNVLVLPN 697

[Close]

BLAST of Moc09g10580 vs. NCBI nr
Match: XP_022134814.1 (pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia])

HSP 1 Score: 474.9 bits (1221), Expect = 4.4e-130
Identity = 230/283 (81.27%), Postives = 246/283 (86.93%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQR--------------------DCVSWNAMIVGYAQNGFGN 60
           MY KC  +     VF+HM  R                    +CVSWNAMIVGYAQNGFGN
Sbjct: 296 MYAKCNRINEARIVFDHMPIRSVVSETSMGVHKMERMKRHLNCVSWNAMIVGYAQNGFGN 355

Query: 61  EALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM 120
           EALGVFSKMLE GEKPDHVTMIGVLCACSHAGLLDEGRHYF+SMSAQ+GLVSLKDHYTCM
Sbjct: 356 EALGVFSKMLESGEKPDHVTMIGVLCACSHAGLLDEGRHYFRSMSAQYGLVSLKDHYTCM 415

Query: 121 VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETS 180
           VDLLGRAGCLEEAKD+IEEMPMQPDA+IWGSLLAACKVHRNIKLGEYVVEKLLEVDAE S
Sbjct: 416 VDLLGRAGCLEEAKDIIEEMPMQPDAIIWGSLLAACKVHRNIKLGEYVVEKLLEVDAENS 475

Query: 181 GPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKK 240
           GPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWIEIQGQ+NVFMVKD+++PKKK
Sbjct: 476 GPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWIEIQGQMNVFMVKDQRNPKKK 535

Query: 241 EIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN 264
           EIY LLRTLL+QMRR GYVPYV SNEIDEE+++EHDN L+L N
Sbjct: 536 EIYMLLRTLLQQMRRAGYVPYVGSNEIDEEQLEEHDNALILLN 578

[Close]

BLAST of Moc09g10580 vs. NCBI nr
Match: KAG7015869.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 470.7 bits (1210), Expect = 8.3e-129
Identity = 218/251 (86.85%), Postives = 240/251 (95.62%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MYMKCGSVENGC+VFEHM++RDCVSWNAMIVGYAQNGFGN+ALG+FS+MLE GEKPDHVT
Sbjct: 435 MYMKCGSVENGCRVFEHMLERDCVSWNAMIVGYAQNGFGNKALGIFSEMLESGEKPDHVT 494

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           MIGVL ACSHAGLLDEGRHYF+SM A+HGLV LKDHYTCMVDLLGRAGCLEEAK+LIEEM
Sbjct: 495 MIGVLSACSHAGLLDEGRHYFRSMHARHGLVPLKDHYTCMVDLLGRAGCLEEAKNLIEEM 554

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           PMQPDA++WGSLLAACKVHRNIKLGEYVVEKLLEVD E SGPYVLLSNMYAERGDWGNVV
Sbjct: 555 PMQPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLLSNMYAERGDWGNVV 614

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
           RIRKLMR+RGVVK PGCSWIEIQG+LNVFMVKDK+H +K+EIY LLRTLL+QM+R GYVP
Sbjct: 615 RIRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKQEIYMLLRTLLQQMKRAGYVP 674

Query: 241 YVVSNEIDEEE 252
           +V ++EIDEE+
Sbjct: 675 FVGNDEIDEEQ 685

[Close]

BLAST of Moc09g10580 vs. NCBI nr
Match: KAG6577831.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 470.7 bits (1210), Expect = 8.3e-129
Identity = 218/251 (86.85%), Postives = 240/251 (95.62%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MYMKCGSVENGC+VFEHM++RDCVSWNAMIVGYAQNGFGN+ALG+FS+MLE GEKPDHVT
Sbjct: 437 MYMKCGSVENGCRVFEHMLERDCVSWNAMIVGYAQNGFGNKALGIFSEMLESGEKPDHVT 496

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           MIGVL ACSHAGLLDEGRHYF+SM A+HGLV LKDHYTCMVDLLGRAGCLEEAK+LIEEM
Sbjct: 497 MIGVLSACSHAGLLDEGRHYFRSMRARHGLVPLKDHYTCMVDLLGRAGCLEEAKNLIEEM 556

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           PMQPDA++WGSLLAACKVHRNIKLGEYVVEKLLEVD E SGPYVLLSNMYAERGDWGNVV
Sbjct: 557 PMQPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLLSNMYAERGDWGNVV 616

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
           RIRKLMR+RGVVK PGCSWIEIQG+LNVFMVKDK+H +K+EIY LLRTLL+QM+R GYVP
Sbjct: 617 RIRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKQEIYMLLRTLLQQMKRAGYVP 676

Query: 241 YVVSNEIDEEE 252
           +V ++EIDEE+
Sbjct: 677 FVGNDEIDEEQ 687

[Close]

BLAST of Moc09g10580 vs. NCBI nr
Match: XP_022923215.1 (pentatricopeptide repeat-containing protein At2g13600 [Cucurbita moschata])

HSP 1 Score: 470.3 bits (1209), Expect = 1.1e-128
Identity = 218/251 (86.85%), Postives = 240/251 (95.62%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MYMKCGSVENGC+VFEHM++RDCVSWNAMIVGYAQNGFGN+ALG+FS+MLE GEKPDHVT
Sbjct: 437 MYMKCGSVENGCRVFEHMLERDCVSWNAMIVGYAQNGFGNKALGIFSEMLESGEKPDHVT 496

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           MIGVL ACSHAGLL+EGRHYF+SM A+HGLV LKDHYTCMVDLLGRAGCLEEAK+LIEEM
Sbjct: 497 MIGVLSACSHAGLLNEGRHYFRSMRARHGLVPLKDHYTCMVDLLGRAGCLEEAKNLIEEM 556

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           PMQPDA++WGSLLAACKVHRNIKLGEYVVEKLLEVD E SGPYVLLSNMYAERGDWGNVV
Sbjct: 557 PMQPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLLSNMYAERGDWGNVV 616

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
           RIRKLMR+RGVVK PGCSWIEIQG+LNVFMVKDK+H +K+EIY LLRTLL+QM+R GYVP
Sbjct: 617 RIRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKQEIYMLLRTLLQQMKRAGYVP 676

Query: 241 YVVSNEIDEEE 252
           YV ++EIDEE+
Sbjct: 677 YVGNDEIDEEQ 687

[Close]

BLAST of Moc09g10580 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.2e-99
Identity = 171/259 (66.02%), Postives = 203/259 (78.38%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MY+KCG VE G  VF  M++RDCVSWNAMI+G+AQNG+GNEAL +F +MLE GEKPDH+T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           MIGVL AC HAG ++EGRHYF SM+   G+  L+DHYTCMVDLLGRAG LEEAK +IEEM
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           PMQPD+VIWGSLLAACKVHRNI LG+YV EKLLEV+   SGPYVLLSNMYAE G W +V+
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
            +RK MRK GV K PGCSWI+IQG  +VFMVKDK HP+KK+I++LL  L+ +MR      
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR--PEQD 675

Query: 241 YVVSNEIDEEEMKEHDNVL 260
           +     +  EEM    N+L
Sbjct: 676 HTEIGSLSSEEMDYSSNLL 692

[Close]

BLAST of Moc09g10580 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 8.2e-71
Identity = 127/253 (50.20%), Postives = 171/253 (67.59%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MY KCGS+E    +F+ M  +D VSWN MI GY+++GFG  AL  F  M   G KPD  T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           M+ VL ACSH GL+D+GR YF +M+  +G++    HY CMVDLLGRAG LE+A +L++ M
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           P +PDA IWG+LL A +VH N +L E   +K+  ++ E SG YVLLSN+YA  G WG+V 
Sbjct: 573 PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 632

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYV- 240
           ++R  MR +GV K PG SWIEIQ + + F V D+ HP+K EI+  L  L  +M++ GYV 
Sbjct: 633 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVS 692

Query: 241 -PYVVSNEIDEEE 252
              VV ++++EEE
Sbjct: 693 KTSVVLHDVEEEE 705

[Close]

BLAST of Moc09g10580 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.2e-69
Identity = 118/256 (46.09%), Postives = 176/256 (68.75%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MY KCGS+E+  +VF  M +RD ++W+ MI G AQNG+  EAL +F +M   G KP+++T
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           ++GVL ACSHAGLL++G +YF+SM   +G+  +++HY CM+DLLG+AG L++A  L+ EM
Sbjct: 362 IVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
             +PDAV W +LL AC+V RN+ L EY  +K++ +D E +G Y LLSN+YA    W +V 
Sbjct: 422 ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVE 481

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
            IR  MR RG+ K PGCSWIE+  Q++ F++ D  HP+  E+   L  L+ ++  +GYVP
Sbjct: 482 EIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVP 541

Query: 241 YV--VSNEIDEEEMKE 255
               V  +++ E+M++
Sbjct: 542 ETNFVLQDLEGEQMED 557

[Close]

BLAST of Moc09g10580 vs. ExPASy Swiss-Prot
Match: Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 5.5e-67
Identity = 120/267 (44.94%), Postives = 172/267 (64.42%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MY KCGS+ +   VF++M+ ++ V+W +++ GY  +G+G EALG+F +M  +G K D VT
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           ++ VL ACSH+G++D+G  YF  M    G+    +HY C+VDLLGRAG L  A  LIEEM
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           PM+P  V+W + L+ C++H  ++LGEY  EK+ E+ +   G Y LLSN+YA  G W +V 
Sbjct: 642 PMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVT 701

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
           RIR LMR +GV K PGCSW+E       F V DK HP  KEIY +L   +++++ +GYVP
Sbjct: 702 RIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVP 761

Query: 241 YV--VSNEIDEEE----MKEHDNVLVL 262
                 +++D+EE    + EH   L L
Sbjct: 762 ETGFALHDVDDEEKDDLLFEHSEKLAL 788

[Close]

BLAST of Moc09g10580 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.6e-66
Identity = 115/253 (45.45%), Postives = 175/253 (69.17%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MY KCG VE   K F+ M  ++  SW AMI GY  +G   +AL +F  M++ G +P+++T
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
            + VL ACSHAGL  EG  +F +M  + G+    +HY CMVDLLGRAG L++A DLI+ M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
            M+PD++IW SLLAAC++H+N++L E  V +L E+D+   G Y+LLS++YA+ G W +V 
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
           R+R +M+ RG+VK PG S +E+ G+++VF++ D++HP++++IY  L  L +++   GYV 
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570

Query: 241 YV--VSNEIDEEE 252
               V +++DEEE
Sbjct: 571 NTSSVCHDVDEEE 583

[Close]

BLAST of Moc09g10580 vs. ExPASy TrEMBL
Match: A0A6J1E1T7 (pentatricopeptide repeat-containing protein At2g13600-like OS=Momordica charantia OX=3673 GN=LOC111025648 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 6.8e-153
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT
Sbjct: 435 MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 494

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM
Sbjct: 495 MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 554

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV
Sbjct: 555 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 614

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
           RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP
Sbjct: 615 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 674

Query: 241 YVVSNEIDEEEMKEHDNVLVLPN 264
           YVVSNEIDEEEMKEHDNVLVLPN
Sbjct: 675 YVVSNEIDEEEMKEHDNVLVLPN 697

[Close]

BLAST of Moc09g10580 vs. ExPASy TrEMBL
Match: A0A6J1BZU9 (pentatricopeptide repeat-containing protein At2g13600-like OS=Momordica charantia OX=3673 GN=LOC111006995 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.1e-130
Identity = 230/283 (81.27%), Postives = 246/283 (86.93%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQR--------------------DCVSWNAMIVGYAQNGFGN 60
           MY KC  +     VF+HM  R                    +CVSWNAMIVGYAQNGFGN
Sbjct: 296 MYAKCNRINEARIVFDHMPIRSVVSETSMGVHKMERMKRHLNCVSWNAMIVGYAQNGFGN 355

Query: 61  EALGVFSKMLELGEKPDHVTMIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCM 120
           EALGVFSKMLE GEKPDHVTMIGVLCACSHAGLLDEGRHYF+SMSAQ+GLVSLKDHYTCM
Sbjct: 356 EALGVFSKMLESGEKPDHVTMIGVLCACSHAGLLDEGRHYFRSMSAQYGLVSLKDHYTCM 415

Query: 121 VDLLGRAGCLEEAKDLIEEMPMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETS 180
           VDLLGRAGCLEEAKD+IEEMPMQPDA+IWGSLLAACKVHRNIKLGEYVVEKLLEVDAE S
Sbjct: 416 VDLLGRAGCLEEAKDIIEEMPMQPDAIIWGSLLAACKVHRNIKLGEYVVEKLLEVDAENS 475

Query: 181 GPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKK 240
           GPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWIEIQGQ+NVFMVKD+++PKKK
Sbjct: 476 GPYVLLSNMYAERGDWGNVVRIRKLMRKRGVVKHPGCSWIEIQGQMNVFMVKDQRNPKKK 535

Query: 241 EIYTLLRTLLKQMRRVGYVPYVVSNEIDEEEMKEHDNVLVLPN 264
           EIY LLRTLL+QMRR GYVPYV SNEIDEE+++EHDN L+L N
Sbjct: 536 EIYMLLRTLLQQMRRAGYVPYVGSNEIDEEQLEEHDNALILLN 578

[Close]

BLAST of Moc09g10580 vs. ExPASy TrEMBL
Match: A0A6J1EB52 (pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita moschata OX=3662 GN=LOC111430973 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 5.2e-129
Identity = 218/251 (86.85%), Postives = 240/251 (95.62%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MYMKCGSVENGC+VFEHM++RDCVSWNAMIVGYAQNGFGN+ALG+FS+MLE GEKPDHVT
Sbjct: 437 MYMKCGSVENGCRVFEHMLERDCVSWNAMIVGYAQNGFGNKALGIFSEMLESGEKPDHVT 496

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           MIGVL ACSHAGLL+EGRHYF+SM A+HGLV LKDHYTCMVDLLGRAGCLEEAK+LIEEM
Sbjct: 497 MIGVLSACSHAGLLNEGRHYFRSMRARHGLVPLKDHYTCMVDLLGRAGCLEEAKNLIEEM 556

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           PMQPDA++WGSLLAACKVHRNIKLGEYVVEKLLEVD E SGPYVLLSNMYAERGDWGNVV
Sbjct: 557 PMQPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLLSNMYAERGDWGNVV 616

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
           RIRKLMR+RGVVK PGCSWIEIQG+LNVFMVKDK+H +K+EIY LLRTLL+QM+R GYVP
Sbjct: 617 RIRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKQEIYMLLRTLLQQMKRAGYVP 676

Query: 241 YVVSNEIDEEE 252
           YV ++EIDEE+
Sbjct: 677 YVGNDEIDEEQ 687

[Close]

BLAST of Moc09g10580 vs. ExPASy TrEMBL
Match: A0A6J1HNH1 (pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita maxima OX=3661 GN=LOC111465245 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 215/251 (85.66%), Postives = 239/251 (95.22%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MYMKCGSVE+GC+VFE M++RDCVSWNAMIVGYAQNGFGN+ALG+FS+MLE GEKPDHVT
Sbjct: 437 MYMKCGSVESGCRVFERMLERDCVSWNAMIVGYAQNGFGNKALGIFSEMLESGEKPDHVT 496

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           MIGVL ACSHAGLLDEGRHYF+SM A+HGLV LKDHYTCMVDLLGRAGCLEEAK++IEEM
Sbjct: 497 MIGVLSACSHAGLLDEGRHYFRSMRARHGLVPLKDHYTCMVDLLGRAGCLEEAKNIIEEM 556

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           PMQPDA++WGSLLAACKVHRNIKLGEYVVEKLLEVD E SGPYVLLSNMYAERGDWGNV+
Sbjct: 557 PMQPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLLSNMYAERGDWGNVM 616

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
           RIRKLMR+RGVVK PGCSWIEIQG+LNVFMVKDK+H +K+EIY LLRTLL+QM+R GYVP
Sbjct: 617 RIRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKQEIYMLLRTLLQQMKRAGYVP 676

Query: 241 YVVSNEIDEEE 252
           YV ++EIDEE+
Sbjct: 677 YVGNDEIDEEQ 687

[Close]

BLAST of Moc09g10580 vs. ExPASy TrEMBL
Match: A0A0A0KJ63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003610 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.8e-122
Identity = 207/251 (82.47%), Postives = 233/251 (92.83%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MYMKCGSVENGC+VF+HM+++DCVSWNAMIVGYAQNGFGN+AL VF KMLE GE PDHVT
Sbjct: 435 MYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVT 494

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           MIGVLCACSHAGLLDEGR+YF+SM+AQHGL+ LKDHYTCMVDLLGRAG LEEAK+LIEEM
Sbjct: 495 MIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 554

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
            MQPDA++WGSLLAACKVHRNI+LGEYVV+KLLEVD E SGPYVLLSNMYAE  DW NVV
Sbjct: 555 SMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVV 614

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
           R+RKLMR+RGVVK PGCSWIEIQG+LNVFMVKDK+H +KKEIY +LRT+L+QM++ GYVP
Sbjct: 615 RVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVP 674

Query: 241 YVVSNEIDEEE 252
           YV SNE DE+E
Sbjct: 675 YVGSNEFDEDE 685

[Close]

BLAST of Moc09g10580 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 362.8 bits (930), Expect = 2.3e-100
Identity = 171/259 (66.02%), Postives = 203/259 (78.38%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MY+KCG VE G  VF  M++RDCVSWNAMI+G+AQNG+GNEAL +F +MLE GEKPDH+T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           MIGVL AC HAG ++EGRHYF SM+   G+  L+DHYTCMVDLLGRAG LEEAK +IEEM
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           PMQPD+VIWGSLLAACKVHRNI LG+YV EKLLEV+   SGPYVLLSNMYAE G W +V+
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
            +RK MRK GV K PGCSWI+IQG  +VFMVKDK HP+KK+I++LL  L+ +MR      
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR--PEQD 675

Query: 241 YVVSNEIDEEEMKEHDNVL 260
           +     +  EEM    N+L
Sbjct: 676 HTEIGSLSSEEMDYSSNLL 692

[Close]

BLAST of Moc09g10580 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 268.5 bits (685), Expect = 5.8e-72
Identity = 127/253 (50.20%), Postives = 171/253 (67.59%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MY KCGS+E    +F+ M  +D VSWN MI GY+++GFG  AL  F  M   G KPD  T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           M+ VL ACSH GL+D+GR YF +M+  +G++    HY CMVDLLGRAG LE+A +L++ M
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           P +PDA IWG+LL A +VH N +L E   +K+  ++ E SG YVLLSN+YA  G WG+V 
Sbjct: 573 PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 632

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYV- 240
           ++R  MR +GV K PG SWIEIQ + + F V D+ HP+K EI+  L  L  +M++ GYV 
Sbjct: 633 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVS 692

Query: 241 -PYVVSNEIDEEE 252
              VV ++++EEE
Sbjct: 693 KTSVVLHDVEEEE 705

[Close]

BLAST of Moc09g10580 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 264.6 bits (675), Expect = 8.4e-71
Identity = 118/256 (46.09%), Postives = 176/256 (68.75%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MY KCGS+E+  +VF  M +RD ++W+ MI G AQNG+  EAL +F +M   G KP+++T
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           ++GVL ACSHAGLL++G +YF+SM   +G+  +++HY CM+DLLG+AG L++A  L+ EM
Sbjct: 362 IVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM 421

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
             +PDAV W +LL AC+V RN+ L EY  +K++ +D E +G Y LLSN+YA    W +V 
Sbjct: 422 ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVE 481

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
            IR  MR RG+ K PGCSWIE+  Q++ F++ D  HP+  E+   L  L+ ++  +GYVP
Sbjct: 482 EIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVP 541

Query: 241 YV--VSNEIDEEEMKE 255
               V  +++ E+M++
Sbjct: 542 ETNFVLQDLEGEQMED 557

[Close]

BLAST of Moc09g10580 vs. TAIR 10
Match: AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 255.8 bits (652), Expect = 3.9e-68
Identity = 120/267 (44.94%), Postives = 172/267 (64.42%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MY KCGS+ +   VF++M+ ++ V+W +++ GY  +G+G EALG+F +M  +G K D VT
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
           ++ VL ACSH+G++D+G  YF  M    G+    +HY C+VDLLGRAG L  A  LIEEM
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
           PM+P  V+W + L+ C++H  ++LGEY  EK+ E+ +   G Y LLSN+YA  G W +V 
Sbjct: 642 PMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVT 701

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
           RIR LMR +GV K PGCSW+E       F V DK HP  KEIY +L   +++++ +GYVP
Sbjct: 702 RIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVP 761

Query: 241 YV--VSNEIDEEE----MKEHDNVLVL 262
                 +++D+EE    + EH   L L
Sbjct: 762 ETGFALHDVDDEEKDDLLFEHSEKLAL 788

[Close]

BLAST of Moc09g10580 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 252.7 bits (644), Expect = 3.3e-67
Identity = 115/253 (45.45%), Postives = 175/253 (69.17%), Query Frame = 0


Query: 1   MYMKCGSVENGCKVFEHMVQRDCVSWNAMIVGYAQNGFGNEALGVFSKMLELGEKPDHVT 60
           MY KCG VE   K F+ M  ++  SW AMI GY  +G   +AL +F  M++ G +P+++T
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 61  MIGVLCACSHAGLLDEGRHYFQSMSAQHGLVSLKDHYTCMVDLLGRAGCLEEAKDLIEEM 120
            + VL ACSHAGL  EG  +F +M  + G+    +HY CMVDLLGRAG L++A DLI+ M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450

Query: 121 PMQPDAVIWGSLLAACKVHRNIKLGEYVVEKLLEVDAETSGPYVLLSNMYAERGDWGNVV 180
            M+PD++IW SLLAAC++H+N++L E  V +L E+D+   G Y+LLS++YA+ G W +V 
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510

Query: 181 RIRKLMRKRGVVKHPGCSWIEIQGQLNVFMVKDKKHPKKKEIYTLLRTLLKQMRRVGYVP 240
           R+R +M+ RG+VK PG S +E+ G+++VF++ D++HP++++IY  L  L +++   GYV 
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570

Query: 241 YV--VSNEIDEEE 252
               V +++DEEE
Sbjct: 571 NTSSVCHDVDEEE 583

The following BLAST results are available for this feature:

BLAST of Moc09g10580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159229.1	1.4e-152	100.00	pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia]	[more]
XP_022134814.1	4.4e-130	81.27	pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia]	[more]
KAG7015869.1	8.3e-129	86.85	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG6577831.1	8.3e-129	86.85	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022923215.1	1.1e-128	86.85	pentatricopeptide repeat-containing protein At2g13600 [Cucurbita moschata]	[more]

BLAST of Moc09g10580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIT7	3.2e-99	66.02	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9SY02	8.2e-71	50.20	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q9SI53	1.2e-69	46.09	Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop...	[more]
Q9LFL5	5.5e-67	44.94	Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX...	[more]
Q9LW32	4.6e-66	45.45	Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop...	[more]

BLAST of Moc09g10580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1T7	6.8e-153	100.00	pentatricopeptide repeat-containing protein At2g13600-like OS=Momordica charanti...	[more]
A0A6J1BZU9	2.1e-130	81.27	pentatricopeptide repeat-containing protein At2g13600-like OS=Momordica charanti...	[more]
A0A6J1EB52	5.2e-129	86.85	pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita moschata OX=3...	[more]
A0A6J1HNH1	1.7e-127	85.66	pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita maxima OX=366...	[more]
A0A0A0KJ63	2.8e-122	82.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003610 PE=4 SV=1	[more]

BLAST of Moc09g10580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G13600.1	2.3e-100	66.02	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G02750.1	5.8e-72	50.20	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G03880.1	8.4e-71	46.09	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G16860.1	3.9e-68	44.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G26782.1	3.3e-67	45.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..227 e-value: 3.6E-38 score: 133.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 24..53 e-value: 1.8E-8 score: 34.0 coord: 96..121 e-value: 3.7E-5 score: 23.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 97..120 e-value: 6.0E-5 score: 21.0 coord: 24..57 e-value: 1.3E-7 score: 29.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 22..56 score: 11.750571
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 195..245 e-value: 4.0E-8 score: 33.2
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 1..253
None	No IPR available	PANTHER	PTHR47926:SF125	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 1..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc09g10580.1	Moc09g10580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding